Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3023

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
3,609,133	+		Echvi_3021	0.48	+0.1
3,609,134	-		Echvi_3021	0.49	+0.1
3,609,137	-		Echvi_3021	0.49	-0.9
3,609,167	-		Echvi_3021	0.56	+0.1
3,609,198	+		Echvi_3021	0.62	+0.8
3,609,213	-		Echvi_3021	0.66	-0.8
3,609,213	-		Echvi_3021	0.66	+0.4
3,609,236	+		Echvi_3021	0.71	+0.2
3,609,288	+		Echvi_3021	0.82	-0.3
3,609,289	-		Echvi_3021	0.82	-0.0
3,609,322	+		Echvi_3021	0.89	+1.0
3,609,322	+		Echvi_3021	0.89	-1.5
3,609,323	-		Echvi_3021	0.89	+0.7
3,609,323	-		Echvi_3021	0.89	-2.9
3,609,323	-		Echvi_3021	0.89	+0.2
3,609,323	-		Echvi_3021	0.89	-0.8
3,609,325	-		Echvi_3021	0.90	+0.2
3,609,331	-				+0.8
3,609,335	+				+1.4
3,609,351	-				-0.2
3,609,351	-				+0.7
3,609,378	-				-0.3
3,609,378	-				+2.1
3,609,409	+				-0.4
3,609,410	-				+0.5
3,609,410	-				-0.1
3,609,432	+				+0.4
3,609,432	+				+0.5
3,609,432	+				+0.1
3,609,432	+				-0.6
3,609,432	+				-0.4
3,609,432	+				+0.6
3,609,432	+				+1.8
3,609,433	-				+1.8
3,609,433	-				+0.2
3,609,433	-				-0.1
3,609,452	+				-0.6
3,609,452	+				-1.0
3,609,453	-				+1.4
3,609,514	+		Echvi_3022	0.11	-0.9
3,609,515	-		Echvi_3022	0.11	-0.3
3,609,557	+		Echvi_3022	0.18	+1.0
3,609,557	+		Echvi_3022	0.18	+0.6
3,609,558	-		Echvi_3022	0.19	-0.1
3,609,558	-		Echvi_3022	0.19	+0.2
3,609,558	-		Echvi_3022	0.19	-0.3
3,609,560	+		Echvi_3022	0.19	+0.0
3,609,568	+		Echvi_3022	0.20	-0.2
3,609,609	-		Echvi_3022	0.27	-1.2
3,609,609	-		Echvi_3022	0.27	-0.0
3,609,613	-		Echvi_3022	0.28	+0.3
3,609,613	-				+1.8
3,609,657	+		Echvi_3022	0.35	+0.2
3,609,657	+		Echvi_3022	0.35	-1.5
3,609,663	+		Echvi_3022	0.36	+0.2
3,609,663	+		Echvi_3022	0.36	+0.3
3,609,664	-		Echvi_3022	0.36	+2.2
3,609,664	-				+2.8
3,609,688	+		Echvi_3022	0.40	-0.4
3,609,701	+		Echvi_3022	0.42	-0.2
3,609,701	+		Echvi_3022	0.42	-0.2
3,609,772	+		Echvi_3022	0.54	-1.5
3,609,791	+		Echvi_3022	0.57	-1.7
3,609,791	+		Echvi_3022	0.57	+0.2
3,609,792	-		Echvi_3022	0.57	+0.2
3,609,812	+		Echvi_3022	0.61	+0.2
3,609,812	+		Echvi_3022	0.61	+1.3
3,609,812	+		Echvi_3022	0.61	-0.3
3,609,812	+		Echvi_3022	0.61	+0.7
3,609,813	-		Echvi_3022	0.61	-0.9
3,609,848	+		Echvi_3022	0.67	-0.9
3,609,854	+		Echvi_3022	0.68	-0.3
3,609,854	+		Echvi_3022	0.68	-0.8
3,609,879	+		Echvi_3022	0.72	+0.3
3,609,879	+		Echvi_3022	0.72	-2.3
3,609,879	+		Echvi_3022	0.72	+0.7
3,609,879	+		Echvi_3022	0.72	-1.9
3,609,880	-		Echvi_3022	0.72	+0.8
3,609,931	+		Echvi_3022	0.80	-0.3
3,609,931	+		Echvi_3022	0.80	+0.6
3,609,932	-		Echvi_3022	0.81	+0.0
3,609,939	-		Echvi_3022	0.82	-0.6
3,609,939	-		Echvi_3022	0.82	-1.6
3,609,998	+				-0.5
3,610,020	-				+0.2
3,610,020	-				+1.1
3,610,020	-				-1.0
3,610,020	-				+0.2
3,610,029	-				+0.3
3,610,076	+				+0.0
3,610,080	+				+1.6
3,610,080	+				+0.0
3,610,125	+				+0.2
3,610,139	+				+1.3
3,610,139	+				-2.5
3,610,139	+				-0.2
3,610,146	+				-0.6
3,610,149	-				-0.5
3,610,149	-				-1.0
3,610,164	+				-1.8
3,610,190	-				-0.5
3,610,214	-				-0.6
3,610,315	-		Echvi_3023	0.11	-0.6
3,610,315	-		Echvi_3023	0.11	-0.9
3,610,315	-		Echvi_3023	0.11	-1.0
3,610,336	-		Echvi_3023	0.12	+0.2
3,610,391	+		Echvi_3023	0.14	-0.8
3,610,392	-		Echvi_3023	0.14	-0.0
3,610,448	-		Echvi_3023	0.17	-2.3
3,610,466	+		Echvi_3023	0.17	-1.7
3,610,467	-		Echvi_3023	0.17	-0.6
3,610,515	-		Echvi_3023	0.20	-0.0
3,610,515	-		Echvi_3023	0.20	+0.5
3,610,551	-		Echvi_3023	0.21	-1.0
3,610,569	+		Echvi_3023	0.22	-3.0
3,610,570	-		Echvi_3023	0.22	-0.5
3,610,570	-		Echvi_3023	0.22	-0.7
3,610,574	+		Echvi_3023	0.22	+0.2
3,610,580	+		Echvi_3023	0.22	-0.2
3,610,581	-		Echvi_3023	0.22	-0.5
3,610,638	-		Echvi_3023	0.25	-0.4
3,610,699	+		Echvi_3023	0.28	-0.1
3,610,771	+		Echvi_3023	0.31	-0.5
3,610,771	+		Echvi_3023	0.31	-1.9
3,610,771	+		Echvi_3023	0.31	+0.2
3,610,819	+		Echvi_3023	0.33	+0.8
3,610,877	+		Echvi_3023	0.35	+0.1
3,610,891	+		Echvi_3023	0.36	-0.7
3,610,895	+		Echvi_3023	0.36	+1.4
3,610,895	+		Echvi_3023	0.36	-1.0
3,610,931	-		Echvi_3023	0.38	+1.1
3,611,025	+		Echvi_3023	0.42	-0.8
3,611,093	+		Echvi_3023	0.45	-1.0
3,611,093	+		Echvi_3023	0.45	-0.5
3,611,094	-		Echvi_3023	0.45	-0.9
3,611,110	-		Echvi_3023	0.45	-0.8
3,611,126	-		Echvi_3023	0.46	+0.0
3,611,160	+		Echvi_3023	0.48	-0.3
3,611,161	-		Echvi_3023	0.48	+1.1
3,611,201	+		Echvi_3023	0.49	-1.4
3,611,201	+		Echvi_3023	0.49	-0.9
3,611,202	-		Echvi_3023	0.49	+0.5
3,611,205	+		Echvi_3023	0.50	+1.2
3,611,205	+		Echvi_3023	0.50	-0.2
3,611,205	+		Echvi_3023	0.50	-2.9
3,611,205	+		Echvi_3023	0.50	-0.0
3,611,205	+		Echvi_3023	0.50	-0.8
3,611,205	+		Echvi_3023	0.50	-1.0
3,611,206	-		Echvi_3023	0.50	+0.7
3,611,206	-		Echvi_3023	0.50	+0.3
3,611,206	-		Echvi_3023	0.50	+0.1
3,611,206	-		Echvi_3023	0.50	-0.8
3,611,206	-		Echvi_3023	0.50	-0.3
3,611,206	-		Echvi_3023	0.50	+0.4
3,611,206	-		Echvi_3023	0.50	-0.5
3,611,206	-		Echvi_3023	0.50	-1.5
3,611,237	+		Echvi_3023	0.51	+0.8
3,611,238	-		Echvi_3023	0.51	-0.2
3,611,238	-		Echvi_3023	0.51	+0.6
3,611,238	-		Echvi_3023	0.51	-0.2
3,611,255	-		Echvi_3023	0.52	-0.5
3,611,297	+		Echvi_3023	0.53	+0.5
3,611,298	-		Echvi_3023	0.54	+0.7
3,611,384	-		Echvi_3023	0.57	+0.6
3,611,389	+		Echvi_3023	0.57	+0.8
3,611,444	+		Echvi_3023	0.60	-0.8
3,611,450	-		Echvi_3023	0.60	-0.8
3,611,515	-		Echvi_3023	0.63	+0.1
3,611,524	+		Echvi_3023	0.63	-2.3
3,611,563	+		Echvi_3023	0.65	+2.7
3,611,572	+		Echvi_3023	0.65	-0.3
3,611,573	-		Echvi_3023	0.65	-0.8
3,611,573	-		Echvi_3023	0.65	-0.3
3,611,760	+		Echvi_3023	0.74	-2.5
3,611,770	+		Echvi_3023	0.74	+0.2
3,611,881	-		Echvi_3023	0.79	+0.4
3,611,959	+		Echvi_3023	0.82	+0.4
3,611,960	-		Echvi_3023	0.82	+0.4
3,611,979	+		Echvi_3023	0.83	+0.3
3,611,982	+		Echvi_3023	0.83	-0.2
3,611,986	-		Echvi_3023	0.83	-0.1
3,611,994	+		Echvi_3023	0.84	-0.1
3,611,997	+		Echvi_3023	0.84	+0.5
3,612,041	+		Echvi_3023	0.86	-1.5
3,612,091	-		Echvi_3023	0.88	-1.8
3,612,091	-		Echvi_3023	0.88	+0.0
3,612,140	+				-2.3
3,612,141	-				-0.0
3,612,224	+				+0.4
3,612,224	+				+0.7
3,612,274	+				+1.8
3,612,275	-				+1.1
3,612,292	+				+2.4
3,612,344	-				-1.8
3,612,344	-				+0.0
3,612,349	-				-0.2
3,612,380	+				+0.3
3,612,380	+				+1.5
3,612,464	-				-1.8
3,612,464	-				-1.7
3,612,478	+				+0.1
3,612,483	+				-0.2
3,612,483	+				+1.1
3,612,483	+				+0.0
3,612,483	+				-0.5
3,612,484	-				+0.4
3,612,484	-				+1.5
3,612,484	-				-1.4
3,612,484	-				+0.5
3,612,500	-				+0.8
3,612,500	-				-0.4
3,612,521	+				-0.8
3,612,544	-				+1.3
3,612,554	-				+1.2
3,612,560	+				-0.3
3,612,560	+				+0.8
3,612,560	+				-0.8
3,612,564	-				+1.3
3,612,564	-				+0.8
3,612,578	+				-0.8
3,612,583	+				-0.4
3,612,584	-				-1.8
3,612,606	+				+3.5
3,612,606	+				+0.7
3,612,607	-				-0.2
3,612,615	+				-0.1
3,612,616	-				-0.5
3,612,618	-				+2.2
3,612,652	-				-1.2
3,612,656	-				+2.0
3,612,667	+				-0.2
3,612,667	+				-1.3
3,612,680	+				+0.0
3,612,681	-				+3.1
3,612,681	-				+0.9
3,612,707	-				+0.4
3,612,709	-				-0.5
3,612,709	-				-1.0
3,612,711	-				+0.5
3,612,711	-				-0.6
3,612,711	-				-1.1
3,612,727	+				+1.4
3,612,761	+				+0.0
3,612,761	+				-1.6
3,612,844	-				+1.5
3,612,864	+				-0.4
3,612,879	-				+0.6
3,612,886	+		Echvi_3024	0.10	-0.2
3,612,887	-		Echvi_3024	0.10	-1.0
3,612,945	+		Echvi_3024	0.12	-0.9
3,612,948	+		Echvi_3024	0.12	-1.2
3,612,949	-		Echvi_3024	0.12	+1.3
3,612,949	-		Echvi_3024	0.12	-0.8
3,612,956	-		Echvi_3024	0.13	-1.3
3,612,991	+		Echvi_3024	0.14	+0.2
3,612,991	+		Echvi_3024	0.14	+1.8
3,612,992	-		Echvi_3024	0.14	-0.9
3,612,994	-		Echvi_3024	0.14	+1.0
3,613,007	-		Echvi_3024	0.15	-1.3
3,613,007	-		Echvi_3024	0.15	-0.9
3,613,010	+		Echvi_3024	0.15	-2.5
3,613,010	+		Echvi_3024	0.15	+0.5
3,613,010	+		Echvi_3024	0.15	-0.2
3,613,011	-		Echvi_3024	0.15	+0.6
3,613,011	-		Echvi_3024	0.15	+0.4
3,613,011	-		Echvi_3024	0.15	+0.4
3,613,040	-		Echvi_3024	0.16	-0.5
3,613,076	-		Echvi_3024	0.17	+0.1
3,613,087	+		Echvi_3024	0.17	+1.6
3,613,088	-		Echvi_3024	0.17	-2.0
3,613,232	+		Echvi_3024	0.23	-0.0
3,613,232	+		Echvi_3024	0.23	+0.8
3,613,233	-		Echvi_3024	0.23	+0.0
3,613,233	-		Echvi_3024	0.23	-0.2
3,613,233	-		Echvi_3024	0.23	-0.0