Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3012

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
3,596,816	+		Echvi_3011	0.40	-0.5
3,596,844	-		Echvi_3011	0.42	+1.1
3,596,897	-		Echvi_3011	0.46	-0.3
3,596,940	+		Echvi_3011	0.50	+1.3
3,596,940	+		Echvi_3011	0.50	+1.2
3,596,940	+		Echvi_3011	0.50	-0.2
3,596,941	-		Echvi_3011	0.50	+0.2
3,596,941	-		Echvi_3011	0.50	-2.5
3,596,986	+		Echvi_3011	0.53	-0.9
3,596,987	-		Echvi_3011	0.53	+0.2
3,596,987	-		Echvi_3011	0.53	-1.5
3,597,068	+		Echvi_3011	0.60	-0.6
3,597,068	+		Echvi_3011	0.60	-1.0
3,597,068	+		Echvi_3011	0.60	-0.5
3,597,117	+		Echvi_3011	0.64	+1.2
3,597,117	+		Echvi_3011	0.64	+0.5
3,597,180	+		Echvi_3011	0.69	+0.5
3,597,261	+		Echvi_3011	0.76	+1.5
3,597,262	-		Echvi_3011	0.76	-0.6
3,597,416	+		Echvi_3011	0.88	-1.1
3,597,428	+		Echvi_3011	0.89	-0.6
3,597,428	+		Echvi_3011	0.89	+0.0
3,597,428	+		Echvi_3011	0.89	-2.1
3,597,429	-		Echvi_3011	0.89	+0.5
3,597,429	-		Echvi_3011	0.89	+0.4
3,597,429	-		Echvi_3011	0.89	-0.5
3,597,429	-		Echvi_3011	0.89	-0.2
3,597,477	+				-0.8
3,597,503	-				-0.9
3,597,503	-				-0.1
3,597,537	+				-0.3
3,597,537	+				-0.8
3,597,537	+				-0.8
3,597,537	+				-0.8
3,597,537	+				-1.0
3,597,537	+				+1.9
3,597,538	-				+0.5
3,597,538	-				+0.5
3,597,538	-				-0.4
3,597,538	-				-1.1
3,597,538	-				+0.6
3,597,538	-				-0.9
3,597,538	-				-0.5
3,597,538	-				+0.0
3,597,540	-				-1.1
3,597,545	-				-1.5
3,597,582	+				+0.4
3,597,617	+				-1.2
3,597,635	-				+0.4
3,597,635	-				-0.1
3,597,646	+				+0.7
3,597,710	-				-2.0
3,597,814	+				-2.3
3,597,815	-				-1.3
3,597,815	-				-1.2
3,598,027	+				+1.8
3,598,028	-		Echvi_3012	0.22	-0.8
3,598,045	+		Echvi_3012	0.23	-0.6
3,598,192	+		Echvi_3012	0.35	-0.9
3,598,193	-		Echvi_3012	0.35	-0.9
3,598,196	+		Echvi_3012	0.36	+0.4
3,598,196	+		Echvi_3012	0.36	+0.4
3,598,197	-		Echvi_3012	0.36	-1.9
3,598,197	-		Echvi_3012	0.36	-1.8
3,598,197	-		Echvi_3012	0.36	-1.7
3,598,214	-		Echvi_3012	0.37	+0.8
3,598,312	-		Echvi_3012	0.45	-0.3
3,598,330	+		Echvi_3012	0.46	-2.6
3,598,330	+		Echvi_3012	0.46	-2.5
3,598,356	+		Echvi_3012	0.48	-0.8
3,598,356	+		Echvi_3012	0.48	-1.0
3,598,356	+		Echvi_3012	0.48	-2.3
3,598,356	+		Echvi_3012	0.48	-0.2
3,598,356	+		Echvi_3012	0.48	-2.6
3,598,356	+		Echvi_3012	0.48	-1.4
3,598,356	+		Echvi_3012	0.48	-0.2
3,598,357	-		Echvi_3012	0.49	-2.0
3,598,357	-		Echvi_3012	0.49	-2.4
3,598,357	-		Echvi_3012	0.49	-1.6
3,598,453	+		Echvi_3012	0.56	-0.2
3,598,460	+		Echvi_3012	0.57	-1.0
3,598,479	+		Echvi_3012	0.58	-1.2
3,598,500	+		Echvi_3012	0.60	+0.2
3,598,514	+		Echvi_3012	0.61	-0.5
3,598,514	+		Echvi_3012	0.61	-0.4
3,598,515	-		Echvi_3012	0.61	+0.1
3,598,549	-		Echvi_3012	0.64	-4.0
3,598,578	-		Echvi_3012	0.66	-1.5
3,598,590	+		Echvi_3012	0.67	-2.0
3,598,592	+		Echvi_3012	0.67	-1.4
3,598,597	-		Echvi_3012	0.68	-3.1
3,598,597	-		Echvi_3012	0.68	-1.5
3,598,634	-		Echvi_3012	0.71	-1.2
3,598,650	+		Echvi_3012	0.72	-1.3
3,598,650	+		Echvi_3012	0.72	-2.0
3,598,651	-		Echvi_3012	0.72	-1.3
3,598,745	-		Echvi_3012	0.80	-1.4
3,598,801	+		Echvi_3012	0.84	-2.1
3,598,802	-		Echvi_3012	0.84	-3.3
3,598,802	-		Echvi_3012	0.84	-1.1
3,598,838	+		Echvi_3012	0.87	-2.1
3,598,906	+				-2.7
3,598,906	+				-2.1
3,598,928	-				-0.8
3,599,259	+		Echvi_3013	0.30	+0.0
3,599,260	-		Echvi_3013	0.31	-0.5
3,599,309	-		Echvi_3013	0.39	-0.0
3,599,336	+		Echvi_3013	0.43	-2.8
3,599,341	+		Echvi_3013	0.44	-0.5
3,599,342	-		Echvi_3013	0.44	-0.9
3,599,342	-		Echvi_3013	0.44	-0.3
3,599,384	+		Echvi_3013	0.52	-0.6
3,599,387	+		Echvi_3013	0.52	+2.1
3,599,387	+		Echvi_3013	0.52	+0.4
3,599,420	+		Echvi_3013	0.58	-2.2
3,599,420	+		Echvi_3013	0.58	-1.0
3,599,421	-		Echvi_3013	0.58	-2.3
3,599,421	-		Echvi_3013	0.58	-0.5
3,599,421	-		Echvi_3013	0.58	+0.8
3,599,421	-		Echvi_3013	0.58	-1.0
3,599,421	-		Echvi_3013	0.58	+1.8
3,599,423	-		Echvi_3013	0.58	-0.2
3,599,429	+		Echvi_3013	0.59	-1.6
3,599,429	+		Echvi_3013	0.59	-0.1
3,599,429	+		Echvi_3013	0.59	-0.2
3,599,430	-		Echvi_3013	0.59	-0.8
3,599,430	-		Echvi_3013	0.59	-0.6
3,599,432	-		Echvi_3013	0.60	-0.8
3,599,432	-		Echvi_3013	0.60	+0.6
3,599,432	-		Echvi_3013	0.60	+1.8
3,599,432	-		Echvi_3013	0.60	-0.4
3,599,432	-		Echvi_3013	0.60	-0.3
3,599,432	-		Echvi_3013	0.60	-0.3
3,599,435	+		Echvi_3013	0.60	+0.2
3,599,435	+		Echvi_3013	0.60	-0.2
3,599,435	+		Echvi_3013	0.60	+1.2
3,599,435	+		Echvi_3013	0.60	+1.8
3,599,436	-		Echvi_3013	0.60	+1.1
3,599,447	+		Echvi_3013	0.62	+1.7
3,599,470	+		Echvi_3013	0.66	+0.4
3,599,471	-		Echvi_3013	0.66	+0.2
3,599,482	-		Echvi_3013	0.68	-0.3
3,599,572	-		Echvi_3013	0.83	+0.6
3,599,576	-		Echvi_3013	0.84	+0.6
3,599,645	-				+0.1
3,599,677	+				-0.5
3,599,765	+				-1.3
3,599,766	-				-1.3
3,599,777	+				-0.0
3,599,778	-				+0.1
3,599,785	+				+0.2
3,599,785	+				-0.4
3,599,785	+				+0.5
3,599,785	+				+0.2
3,599,786	-				-0.1
3,599,829	+				+1.3
3,599,861	-				-1.0
3,599,923	-				+0.7
3,599,923	-				-0.0
3,599,936	+				-0.3
3,599,936	+				-1.3
3,599,946	+				+0.4
3,599,954	-				+1.5
3,599,954	-				-1.0