Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2948

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
3,524,317	+		Echvi_2946	0.86	+0.3
3,524,346	-		Echvi_2946	0.89	-2.5
3,524,402	+				-0.5
3,524,402	+				-2.0
3,524,403	-				-1.3
3,524,406	+				-1.1
3,524,407	-				-2.1
3,524,407	-				-1.3
3,524,407	-				-0.2
3,524,410	+				-2.4
3,524,484	+				-1.9
3,524,520	+				+1.8
3,524,521	-				+0.5
3,524,575	+				-1.1
3,524,575	+				+0.8
3,524,576	-				-0.2
3,524,611	+				-2.1
3,524,612	-				-2.2
3,524,612	-				-0.5
3,524,612	-				-2.1
3,524,634	+		Echvi_2947	0.12	-1.7
3,524,690	-		Echvi_2947	0.34	+0.2
3,524,695	+		Echvi_2947	0.36	-0.9
3,524,711	-		Echvi_2947	0.42	+1.8
3,524,725	+		Echvi_2947	0.48	+0.2
3,524,803	+		Echvi_2947	0.79	-1.0
3,524,944	-				-2.2
3,524,945	+				+0.8
3,524,946	-				-0.9
3,524,955	+				+0.1
3,524,955	+				+0.3
3,524,956	-				-0.4
3,524,956	-				-0.2
3,524,956	-				+0.3
3,524,960	-				+0.1
3,525,035	-				+0.5
3,525,035	-				-0.5
3,525,035	-				+0.4
3,525,035	-				-0.9
3,525,043	+				-0.3
3,525,130	+				+2.1
3,525,162	+				-0.4
3,525,174	+				-3.1
3,525,174	+				-2.4
3,526,771	+				-0.3
3,526,803	-				-1.3
3,526,803	-				-2.7
3,526,832	+				-0.1
3,526,833	-				-0.2
3,526,833	-				-1.3
3,526,840	+				+0.1
3,526,841	-				-0.8
3,526,912	-				-0.0
3,526,912	-				-1.7
3,526,954	-		Echvi_2949	0.11	-1.7
3,527,131	-		Echvi_2949	0.29	-2.3
3,527,294	+		Echvi_2949	0.45	+0.8
3,527,294	+		Echvi_2949	0.45	-0.1
3,527,307	+		Echvi_2949	0.47	-0.1
3,527,307	+		Echvi_2949	0.47	-0.2
3,527,325	+		Echvi_2949	0.48	-0.7
3,527,326	-		Echvi_2949	0.49	-1.9
3,527,399	+		Echvi_2949	0.56	-0.2
3,527,404	-		Echvi_2949	0.56	-1.0
3,527,404	-		Echvi_2949	0.56	+1.5
3,527,464	+		Echvi_2949	0.62	+0.8
3,527,470	+		Echvi_2949	0.63	-0.3
3,527,548	+		Echvi_2949	0.71	+0.3
3,527,608	+		Echvi_2949	0.77	-1.3
3,527,608	+		Echvi_2949	0.77	-0.4
3,527,608	+		Echvi_2949	0.77	+0.5
3,527,609	-		Echvi_2949	0.77	-0.3