Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2905

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
3,478,955	+		Echvi_2903	0.83	-0.0
3,478,960	+		Echvi_2903	0.84	-2.4
3,478,960	+		Echvi_2903	0.84	-0.6
3,478,997	+		Echvi_2903	0.87	-1.8
3,478,997	+		Echvi_2903	0.87	-0.6
3,478,998	-		Echvi_2903	0.87	+0.1
3,478,998	-		Echvi_2903	0.87	+1.0
3,479,012	+		Echvi_2903	0.88	+0.2
3,479,018	-		Echvi_2903	0.89	+0.1
3,479,021	+		Echvi_2903	0.89	+0.7
3,479,022	-		Echvi_2903	0.89	+0.3
3,479,022	-		Echvi_2903	0.89	+0.1
3,479,022	-		Echvi_2903	0.89	-1.1
3,479,045	-				-0.6
3,479,141	+				-0.1
3,479,142	-				+0.8
3,479,149	+				-1.2
3,479,164	+				-1.0
3,479,164	+				+2.8
3,479,164	+				+0.4
3,479,164	+				-1.7
3,479,165	-				+0.9
3,479,183	+				-0.2
3,479,183	+				-0.6
3,479,183	+				+0.3
3,479,184	-				+0.3
3,479,184	-				-0.1
3,479,255	+		Echvi_2904	0.16	+0.6
3,479,256	-		Echvi_2904	0.17	-0.8
3,479,277	-		Echvi_2904	0.22	+1.4
3,479,286	+		Echvi_2904	0.24	-0.3
3,479,301	+		Echvi_2904	0.27	-1.4
3,479,304	+		Echvi_2904	0.28	-1.6
3,479,306	+		Echvi_2904	0.29	+0.4
3,479,307	-		Echvi_2904	0.29	-0.2
3,479,307	-		Echvi_2904	0.29	-0.9
3,479,324	-		Echvi_2904	0.33	+0.6
3,479,425	+		Echvi_2904	0.58	-0.8
3,479,425	+		Echvi_2904	0.58	+0.3
3,479,425	+		Echvi_2904	0.58	-1.7
3,479,426	-		Echvi_2904	0.58	-0.3
3,479,431	+		Echvi_2904	0.59	-2.5
3,479,432	-		Echvi_2904	0.59	+0.5
3,479,488	+		Echvi_2904	0.73	+0.7
3,479,488	+		Echvi_2904	0.73	-0.9
3,479,488	+		Echvi_2904	0.73	+0.8
3,479,488	+		Echvi_2904	0.73	-1.5
3,479,489	-		Echvi_2904	0.73	-1.0
3,479,489	-		Echvi_2904	0.73	-0.4
3,479,569	+				-0.6
3,479,569	+				-1.5
3,479,570	-				+0.7
3,479,574	+				+0.3
3,479,598	+				+0.6
3,479,599	-				-0.0
3,479,641	-				+0.4
3,479,658	+				+0.3
3,479,703	-				-0.2
3,479,783	+				+0.6
3,479,783	+				+0.5
3,479,786	-				-0.9
3,479,834	+				-1.3
3,479,840	+				+0.1
3,479,841	-				-0.5
3,479,853	+				-0.4
3,479,939	+				+1.8
3,479,939	+				+0.7
3,479,940	-				-0.7
3,479,940	-				-1.6
3,479,942	+				-0.7
3,479,943	-				+0.5
3,480,004	+				+0.4
3,480,026	+				+0.1
3,480,027	-				+0.4
3,480,059	-				-1.2
3,480,093	-				+0.1
3,480,104	-				+0.1
3,480,111	+				-1.2
3,480,111	+				+0.5
3,480,112	-				-0.3
3,480,132	+				-0.2
3,480,133	-				+0.8
3,480,205	-		Echvi_2905	0.13	-0.9
3,480,364	-		Echvi_2905	0.19	+1.1
3,480,376	-		Echvi_2905	0.19	-0.7
3,480,443	-		Echvi_2905	0.22	-1.2
3,480,495	-		Echvi_2905	0.24	-0.1
3,480,501	+		Echvi_2905	0.24	-1.7
3,480,502	-		Echvi_2905	0.24	+1.8
3,480,569	+		Echvi_2905	0.26	-1.0
3,480,577	+		Echvi_2905	0.27	-0.4
3,480,578	-		Echvi_2905	0.27	+0.5
3,480,638	+		Echvi_2905	0.29	-0.9
3,480,642	+		Echvi_2905	0.29	-0.5
3,480,642	+		Echvi_2905	0.29	+0.5
3,480,643	-		Echvi_2905	0.29	+1.4
3,480,643	-		Echvi_2905	0.29	-1.2
3,480,709	+		Echvi_2905	0.32	-0.3
3,480,911	-		Echvi_2905	0.40	-0.4
3,480,911	-		Echvi_2905	0.40	+0.5
3,480,911	-		Echvi_2905	0.40	-1.2
3,480,911	-		Echvi_2905	0.40	-0.0
3,480,979	-		Echvi_2905	0.42	-0.1
3,480,979	-		Echvi_2905	0.42	+0.3
3,480,981	+		Echvi_2905	0.42	+1.0
3,481,057	+		Echvi_2905	0.45	+0.5
3,481,058	-		Echvi_2905	0.45	+2.1
3,481,058	-		Echvi_2905	0.45	-0.6
3,481,058	-		Echvi_2905	0.45	-1.5
3,481,058	-		Echvi_2905	0.45	-1.0
3,481,082	-		Echvi_2905	0.46	+0.6
3,481,083	+		Echvi_2905	0.46	-1.0
3,481,154	+		Echvi_2905	0.49	+0.5
3,481,157	-		Echvi_2905	0.49	+0.6
3,481,157	-		Echvi_2905	0.49	+0.1
3,481,168	-		Echvi_2905	0.49	-0.9
3,481,205	-		Echvi_2905	0.51	+0.8
3,481,216	+		Echvi_2905	0.51	-0.0
3,481,217	-		Echvi_2905	0.51	+0.1
3,481,257	+		Echvi_2905	0.53	-0.2
3,481,257	+		Echvi_2905	0.53	-0.0
3,481,258	-		Echvi_2905	0.53	+1.2
3,481,419	-		Echvi_2905	0.59	-1.7
3,481,473	+		Echvi_2905	0.61	-0.2
3,481,473	+		Echvi_2905	0.61	-0.2
3,481,474	-		Echvi_2905	0.61	-0.0
3,481,474	-		Echvi_2905	0.61	+0.5
3,481,479	+		Echvi_2905	0.61	-0.3
3,481,480	-		Echvi_2905	0.61	-0.6
3,481,486	+		Echvi_2905	0.62	+1.1
3,481,487	-		Echvi_2905	0.62	+0.4
3,481,487	-		Echvi_2905	0.62	+1.5
3,481,541	-		Echvi_2905	0.64	-0.3
3,481,638	-		Echvi_2905	0.67	+0.8
3,481,638	-		Echvi_2905	0.67	+0.0
3,481,643	-		Echvi_2905	0.68	-0.6
3,481,668	-		Echvi_2905	0.69	+1.0
3,481,695	-		Echvi_2905	0.70	-0.1
3,481,695	-		Echvi_2905	0.70	-1.0
3,481,697	+		Echvi_2905	0.70	+0.1
3,481,698	-		Echvi_2905	0.70	+1.7
3,481,705	+		Echvi_2905	0.70	+2.1
3,481,705	+		Echvi_2905	0.70	+0.5
3,481,706	-		Echvi_2905	0.70	-0.4
3,481,710	-		Echvi_2905	0.70	+0.7
3,481,710	-		Echvi_2905	0.70	+0.7
3,481,710	-		Echvi_2905	0.70	-2.0
3,481,710	-		Echvi_2905	0.70	-0.2
3,481,710	-		Echvi_2905	0.70	-0.7
3,481,716	+		Echvi_2905	0.70	-0.3
3,481,716	+		Echvi_2905	0.70	+1.3
3,481,716	+		Echvi_2905	0.70	-1.1
3,481,717	-		Echvi_2905	0.71	-0.4
3,481,717	-		Echvi_2905	0.71	+0.9
3,481,740	+		Echvi_2905	0.71	-0.3
3,481,763	+		Echvi_2905	0.72	-0.2
3,481,763	+		Echvi_2905	0.72	-0.6
3,481,798	+				+0.8
3,481,869	-		Echvi_2905	0.76	-0.7
3,481,941	-		Echvi_2905	0.79	-0.6
3,481,941	-		Echvi_2905	0.79	-0.9
3,481,970	+		Echvi_2905	0.80	+0.4
3,481,997	+		Echvi_2905	0.81	-0.7
3,482,259	-				+0.5
3,482,338	+				-0.7
3,482,487	+				+1.2
3,482,670	+		Echvi_2906	0.19	-0.0
3,482,675	-		Echvi_2906	0.21	+0.2
3,482,694	+		Echvi_2906	0.28	+1.4
3,482,710	+		Echvi_2906	0.34	+0.4
3,482,710	+		Echvi_2906	0.34	+0.4
3,482,719	+		Echvi_2906	0.38	+0.8
3,482,720	-		Echvi_2906	0.38	+0.3
3,482,720	-				-0.2
3,482,720	-		Echvi_2906	0.38	-0.3
3,482,753	+		Echvi_2906	0.51	+1.5
3,482,774	+		Echvi_2906	0.58	-0.9
3,482,774	+		Echvi_2906	0.58	+1.3
3,482,779	+		Echvi_2906	0.60	-0.3
3,482,779	+		Echvi_2906	0.60	-0.2
3,482,779	+		Echvi_2906	0.60	-0.7
3,482,779	+		Echvi_2906	0.60	+0.1
3,482,780	-		Echvi_2906	0.61	-0.3
3,482,780	-		Echvi_2906	0.61	-0.3
3,482,780	-		Echvi_2906	0.61	-0.4
3,482,901	+				-0.5
3,482,990	+				-1.2
3,483,029	-				+1.8
3,483,029	-				+0.4
3,483,077	+				+0.9
3,483,092	-				-0.1
3,483,092	-				+0.8
3,483,092	-				-0.2
3,483,182	-				+0.2
3,483,223	+				+0.4
3,483,239	-				-0.3
3,483,243	-				+0.4
3,483,440	+				+2.1
3,483,441	-				+0.0