Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2860

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
3,429,640	+				-0.7
3,429,741	+		Echvi_2859	0.11	-1.0
3,429,742	-		Echvi_2859	0.12	-0.8
3,429,750	-		Echvi_2859	0.13	-1.1
3,429,773	-		Echvi_2859	0.16	-0.0
3,429,821	+		Echvi_2859	0.23	-0.4
3,429,821	+		Echvi_2859	0.23	-1.7
3,429,825	-		Echvi_2859	0.24	+0.7
3,429,901	+		Echvi_2859	0.35	-0.5
3,429,902	-		Echvi_2859	0.36	-0.6
3,429,902	-		Echvi_2859	0.36	-0.4
3,429,902	-		Echvi_2859	0.36	-0.0
3,429,902	-		Echvi_2859	0.36	-1.7
3,429,910	+		Echvi_2859	0.37	-0.4
3,429,911	-		Echvi_2859	0.37	+0.4
3,429,917	+		Echvi_2859	0.38	-0.5
3,429,917	+		Echvi_2859	0.38	-0.9
3,429,921	-		Echvi_2859	0.38	-0.1
3,429,958	+		Echvi_2859	0.44	+0.9
3,430,011	+		Echvi_2859	0.52	-1.1
3,430,052	+		Echvi_2859	0.58	+3.4
3,430,116	+		Echvi_2859	0.68	-1.5
3,430,117	-		Echvi_2859	0.68	+0.9
3,430,181	-		Echvi_2859	0.77	-0.3
3,430,393	+				+1.0
3,430,410	+				-0.0
3,430,436	+				-0.6
3,430,641	+				+0.0
3,430,695	-		Echvi_2860	0.13	+0.4
3,430,760	+		Echvi_2860	0.28	-1.1
3,430,773	+		Echvi_2860	0.30	+0.3
3,430,827	+		Echvi_2860	0.42	+2.9
3,430,905	-		Echvi_2860	0.59	-0.7
3,430,936	+		Echvi_2860	0.66	-0.6
3,431,019	-		Echvi_2860	0.84	+0.0
3,431,087	+				-0.5
3,431,109	+				+0.9
3,431,109	+				-0.1
3,431,123	+				-0.3
3,431,123	+				+0.9
3,431,127	+				-0.2
3,431,127	+				+0.4
3,431,128	-				-0.7
3,431,232	-				+0.4
3,431,419	-		Echvi_2861	0.21	+2.4
3,431,419	-		Echvi_2861	0.21	+1.3
3,431,578	+		Echvi_2861	0.32	+0.9
3,431,688	+		Echvi_2861	0.40	-0.5
3,431,695	-		Echvi_2861	0.40	+0.9
3,431,700	-		Echvi_2861	0.41	-0.1
3,431,732	-		Echvi_2861	0.43	-0.7
3,431,736	+				+3.4
3,431,803	-		Echvi_2861	0.48	+1.1