Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2550

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
3,025,541	+				+1.1
3,025,560	+				-0.9
3,025,560	+				+0.4
3,025,560	+				-0.9
3,025,560	+				-0.2
3,025,662	+		Echvi_2550	0.58	-1.7
3,025,681	-		Echvi_2550	0.68	-0.7
3,025,681	-		Echvi_2550	0.68	-0.5
3,025,688	-		Echvi_2550	0.71	-0.5
3,025,709	+				+0.9
3,025,710	-		Echvi_2550	0.83	-1.0
3,025,807	+				+0.2
3,025,808	-				-1.9
3,025,810	+				+0.8
3,025,811	-				-0.3
3,025,819	-				+0.3
3,025,839	-				-0.1
3,025,842	-				-0.1
3,025,842	-				-0.5
3,025,870	-				+1.4
3,025,872	-				+1.0
3,025,872	-				-0.4
3,025,872	-				+0.7
3,025,892	+				-0.7
3,025,942	+				-1.6
3,025,985	+				-0.1
3,026,062	+				+0.2
3,026,062	+				-0.0
3,026,062	+				-0.5
3,026,063	-				+0.6
3,026,068	+				+0.7
3,026,151	+				+0.9
3,026,152	-				-0.7
3,026,295	+		Echvi_2551	0.15	+0.4
3,026,303	-		Echvi_2551	0.16	+0.6
3,026,347	-		Echvi_2551	0.18	-1.1
3,026,354	-		Echvi_2551	0.18	+0.5
3,026,370	+		Echvi_2551	0.19	+1.0
3,026,370	+		Echvi_2551	0.19	-0.7
3,026,371	-		Echvi_2551	0.19	-2.2
3,026,374	-		Echvi_2551	0.19	+0.6
3,026,415	-		Echvi_2551	0.21	+0.9
3,026,415	-		Echvi_2551	0.21	-0.4
3,026,470	+		Echvi_2551	0.23	-0.1
3,026,475	+		Echvi_2551	0.23	-0.3
3,026,476	-		Echvi_2551	0.23	-1.5
3,026,476	-		Echvi_2551	0.23	+1.3
3,026,476	-		Echvi_2551	0.23	+0.5
3,026,559	+		Echvi_2551	0.27	+0.2
3,026,559	+		Echvi_2551	0.27	-0.1
3,026,560	-		Echvi_2551	0.27	+0.5
3,026,689	-		Echvi_2551	0.33	-0.4
3,026,698	+		Echvi_2551	0.33	-0.2
3,026,698	+		Echvi_2551	0.33	+1.1
3,026,729	+		Echvi_2551	0.35	-0.9
3,026,730	-		Echvi_2551	0.35	-1.2
3,026,730	-		Echvi_2551	0.35	-0.6
3,026,730	-		Echvi_2551	0.35	-0.1