Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2524

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,997,343	+		Echvi_2523	0.78	-0.5
2,997,343	+		Echvi_2523	0.78	-0.1
2,997,343	+		Echvi_2523	0.78	-1.9
2,997,343	+		Echvi_2523	0.78	-1.4
2,997,438	-		Echvi_2523	0.85	+0.5
2,997,451	+		Echvi_2523	0.86	-0.1
2,997,451	+		Echvi_2523	0.86	-0.2
2,997,451	+		Echvi_2523	0.86	-1.5
2,997,451	+		Echvi_2523	0.86	+0.3
2,997,452	-		Echvi_2523	0.86	-0.6
2,997,452	-		Echvi_2523	0.86	-0.8
2,997,452	-		Echvi_2523	0.86	+1.0
2,997,458	-		Echvi_2523	0.87	-0.5
2,997,550	+				+0.2
2,997,551	-				-0.1
2,997,553	+				-1.1
2,997,593	-				-1.2
2,997,594	+				-0.5
2,997,594	+				+0.6
2,997,595	-				-1.1
2,997,595	-				+0.5
2,997,595	-				-0.2
2,997,648	-				-1.4
2,997,670	+				-0.6
2,997,681	+				+0.6
2,997,682	-				-1.0
2,997,688	+				+2.2
2,997,705	-				+1.9
2,997,726	+				+0.3
2,997,770	+				+0.7
2,997,799	+				+0.1
2,997,800	-				+0.1
2,997,804	+				+0.7
2,997,804	+				+0.9
2,997,804	+				+1.2
2,997,805	-				-0.5
2,997,838	+				+0.6
2,997,838	+				+0.7
2,997,838	+				-0.9
2,997,895	+				-0.8
2,997,913	+				+1.3
2,997,913	+				-0.1
2,997,913	+				-1.9
2,997,955	-				+0.3
2,998,002	+				+1.1
2,998,003	-				-0.4
2,998,003	-				-0.2
2,998,005	+				+0.8
2,998,005	+				+0.9
2,998,034	-				+0.9
2,998,036	+				+0.1
2,998,036	+				-1.9
2,998,037	-				-0.8
2,998,070	-				+0.1
2,998,070	-				+0.3
2,998,070	-				-0.1
2,998,100	+				-0.8
2,998,161	-				+0.6
2,998,164	+				+2.2
2,998,164	+				+0.1
2,998,164	+				+1.3
2,998,164	+				-1.2
2,998,164	+				+1.6
2,998,165	-				-0.5
2,998,165	-				-0.1
2,998,165	-				+0.4
2,998,194	+				-0.5
2,998,194	+				+0.0
2,998,195	-				+1.0
2,998,236	+				+0.9
2,998,237	-				+0.4
2,998,237	-				-1.5
2,998,237	-				+0.2
2,998,237	-				-0.9
2,998,275	+				+0.2
2,998,276	-				-0.3
2,998,484	+		Echvi_2524	0.17	+3.5
2,998,522	-		Echvi_2524	0.22	+2.1
2,998,645	+		Echvi_2524	0.36	-0.6
2,998,741	+		Echvi_2524	0.47	-1.2
2,998,954	+		Echvi_2524	0.71	+1.7
2,999,011	+		Echvi_2524	0.78	+0.9
2,999,012	-		Echvi_2524	0.78	+2.2
2,999,028	-		Echvi_2524	0.80	-1.1
2,999,193	-				+1.4
2,999,361	+				+1.4
2,999,586	+		Echvi_2525	0.25	-0.9
2,999,600	+		Echvi_2525	0.26	+0.9
2,999,609	-		Echvi_2525	0.27	+0.6
2,999,702	+		Echvi_2525	0.35	+1.3
2,999,703	-		Echvi_2525	0.35	+0.7
2,999,703	-		Echvi_2525	0.35	+1.0
2,999,712	-		Echvi_2525	0.36	+0.5
2,999,798	+		Echvi_2525	0.44	+0.6
2,999,803	-		Echvi_2525	0.44	-0.5
2,999,803	-		Echvi_2525	0.44	+1.2
2,999,826	-		Echvi_2525	0.47	+0.3
3,000,029	+		Echvi_2525	0.65	+0.8
3,000,047	+		Echvi_2525	0.67	+0.8
3,000,068	+		Echvi_2525	0.69	+0.5
3,000,069	-		Echvi_2525	0.69	+1.6
3,000,148	+		Echvi_2525	0.76	+1.9