Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2432

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,883,611	-				-2.2
2,883,633	-				+0.5
2,883,649	+				+0.5
2,883,649	+				-1.3
2,883,650	-				+0.6
2,883,653	+				+0.2
2,883,739	-		Echvi_2431	0.11	+0.3
2,883,739	-		Echvi_2431	0.11	+0.5
2,883,819	+		Echvi_2431	0.20	-0.9
2,883,999	+		Echvi_2431	0.41	-0.7
2,884,000	-		Echvi_2431	0.41	+0.6
2,884,000	-		Echvi_2431	0.41	+1.1
2,884,000	-		Echvi_2431	0.41	+0.1
2,884,036	-		Echvi_2431	0.45	-0.7
2,884,108	+		Echvi_2431	0.53	-0.9
2,884,109	-		Echvi_2431	0.53	-0.5
2,884,109	-		Echvi_2431	0.53	-0.7
2,884,109	-		Echvi_2431	0.53	-0.3
2,884,129	+		Echvi_2431	0.55	+0.8
2,884,133	+		Echvi_2431	0.56	-1.5
2,884,133	+		Echvi_2431	0.56	-0.4
2,884,133	+		Echvi_2431	0.56	+0.1
2,884,133	+		Echvi_2431	0.56	-0.1
2,884,134	-		Echvi_2431	0.56	+0.7
2,884,134	-		Echvi_2431	0.56	-1.4
2,884,134	-		Echvi_2431	0.56	-1.7
2,884,171	-		Echvi_2431	0.60	-0.1
2,884,171	-		Echvi_2431	0.60	+0.3
2,884,177	-		Echvi_2431	0.61	-0.1
2,884,177	-		Echvi_2431	0.61	-0.7
2,884,177	-		Echvi_2431	0.61	+0.4
2,884,177	-		Echvi_2431	0.61	+0.7
2,884,205	-		Echvi_2431	0.64	+1.0
2,884,246	-		Echvi_2431	0.69	-0.6
2,884,364	-		Echvi_2431	0.82	+0.6
2,884,387	+		Echvi_2431	0.85	+0.2
2,884,388	-		Echvi_2431	0.85	+1.6
2,884,546	+				-1.2
2,884,546	+				+0.3
2,884,547	-				+0.1
2,884,552	+				+0.1
2,884,552	+				+0.9
2,884,553	-				-0.5
2,884,553	-				+0.2
2,884,553	-				+1.5
2,884,561	+				-0.5
2,884,592	+		Echvi_2432	0.10	+0.1
2,884,593	-		Echvi_2432	0.10	+1.4
2,884,597	+		Echvi_2432	0.11	-0.0
2,884,598	-		Echvi_2432	0.11	+0.3
2,884,598	-		Echvi_2432	0.11	+0.7
2,884,598	-		Echvi_2432	0.11	-0.5
2,884,598	-		Echvi_2432	0.11	-0.2
2,884,599	+		Echvi_2432	0.11	-0.5
2,884,617	+		Echvi_2432	0.15	+0.5
2,884,618	-		Echvi_2432	0.15	+0.7
2,884,618	-		Echvi_2432	0.15	+2.4
2,884,618	-		Echvi_2432	0.15	-0.0
2,884,621	+		Echvi_2432	0.16	-1.4
2,884,622	-		Echvi_2432	0.16	-1.4
2,884,622	-		Echvi_2432	0.16	-0.8
2,884,622	-		Echvi_2432	0.16	-1.1
2,884,662	+		Echvi_2432	0.23	+0.1
2,884,663	-		Echvi_2432	0.24	+0.8
2,884,694	+		Echvi_2432	0.29	-0.2
2,884,694	+		Echvi_2432	0.29	+2.3
2,884,694	+		Echvi_2432	0.29	-1.6
2,884,694	+		Echvi_2432	0.29	-0.7
2,884,694	+		Echvi_2432	0.29	+1.8
2,884,697	+		Echvi_2432	0.30	+0.1
2,884,697	+		Echvi_2432	0.30	-0.1
2,884,698	-		Echvi_2432	0.30	-1.3
2,884,705	+		Echvi_2432	0.31	-0.6
2,884,705	+		Echvi_2432	0.31	-1.5
2,884,820	+		Echvi_2432	0.53	+0.1
2,884,851	+		Echvi_2432	0.59	+0.5
2,884,852	-		Echvi_2432	0.59	-0.5
2,884,852	-		Echvi_2432	0.59	-0.2
2,884,873	+		Echvi_2432	0.63	-0.4
2,884,873	+		Echvi_2432	0.63	-1.2
2,884,904	+		Echvi_2432	0.69	-0.6
2,884,905	-		Echvi_2432	0.69	-0.5
2,884,907	+		Echvi_2432	0.69	-0.7
2,884,907	+		Echvi_2432	0.69	-1.5
2,884,908	-		Echvi_2432	0.70	-1.1
2,884,914	+		Echvi_2432	0.71	+0.4
2,884,914	+		Echvi_2432	0.71	+0.8
2,884,915	-		Echvi_2432	0.71	+1.0
2,884,915	-		Echvi_2432	0.71	-0.4
2,884,920	+		Echvi_2432	0.72	+0.4
2,884,921	-		Echvi_2432	0.72	-0.2
2,885,000	-		Echvi_2432	0.87	-0.4
2,885,068	+				-0.1
2,885,082	+				+0.9
2,885,097	+				-0.4
2,885,097	+				+1.1
2,885,098	-				-0.3
2,885,098	-				-0.8
2,885,098	-				+0.1
2,885,239	+		Echvi_2433	0.33	+1.8
2,885,239	+		Echvi_2433	0.33	+0.7
2,885,278	+		Echvi_2433	0.49	-0.7
2,885,278	+		Echvi_2433	0.49	-0.4
2,885,323	-		Echvi_2433	0.67	-0.2
2,885,323	-		Echvi_2433	0.67	-0.5
2,885,336	-		Echvi_2433	0.72	+0.4
2,885,342	-		Echvi_2433	0.75	+0.5
2,885,342	-		Echvi_2433	0.75	+0.4
2,885,355	+		Echvi_2433	0.80	+0.1
2,885,355	+		Echvi_2433	0.80	+0.0
2,885,355	+		Echvi_2433	0.80	+0.7
2,885,355	+		Echvi_2433	0.80	-2.9
2,885,356	-		Echvi_2433	0.80	-0.5
2,885,356	-		Echvi_2433	0.80	+0.8
2,885,356	-		Echvi_2433	0.80	+1.4
2,885,356	-		Echvi_2433	0.80	-0.9
2,885,394	-				-1.2
2,885,496	+				+0.2
2,885,543	+				+0.5
2,885,543	+				-0.1
2,885,543	+				-0.3
2,885,543	+				+0.5
2,885,568	-				-2.5
2,885,568	-				+1.3
2,885,576	+				-0.5
2,885,584	+				+1.0
2,885,585	-				+0.5
2,885,611	+		Echvi_2434	0.16	-0.2
2,885,616	+		Echvi_2434	0.18	+0.3
2,885,616	+		Echvi_2434	0.18	+0.0
2,885,616	+		Echvi_2434	0.18	-0.3
2,885,617	-		Echvi_2434	0.18	-0.3
2,885,623	+		Echvi_2434	0.19	+1.0
2,885,732	+		Echvi_2434	0.48	-0.7
2,885,765	+		Echvi_2434	0.56	+0.1
2,885,769	+		Echvi_2434	0.57	+0.3
2,885,781	+		Echvi_2434	0.60	+2.0
2,885,795	+		Echvi_2434	0.64	+1.5
2,885,796	-		Echvi_2434	0.64	-1.2
2,885,801	+		Echvi_2434	0.65	+0.3
2,885,822	+		Echvi_2434	0.71	-0.2
2,885,832	+		Echvi_2434	0.73	+0.2
2,885,833	-		Echvi_2434	0.74	+0.5
2,885,932	+				-1.2
2,885,933	-				-0.1
2,885,937	-				+0.8
2,885,940	-				-1.5
2,886,006	-				-1.2
2,886,006	-				+1.0
2,886,011	+				+1.8
2,886,021	+				+1.8
2,886,029	-				+0.5
2,886,040	+				+0.0
2,886,041	-				-0.0
2,886,058	+				+1.8