Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2383

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,825,898	-		Echvi_2382	0.73	-2.2
2,826,058	+		Echvi_2382	0.79	-3.5
2,826,536	-				-2.3
2,826,551	+				-1.6
2,826,551	+				-1.3
2,826,551	+				-2.4
2,826,551	+				-0.5
2,826,581	-				-2.6
2,826,584	+				-1.8
2,826,584	+				-3.1
2,826,585	-				-1.3
2,826,585	-				-0.8
2,826,588	+				-2.1
2,826,588	+				-0.2
2,826,589	-				-1.0
2,826,637	+				-3.5
2,826,663	-				-0.3
2,826,667	+				-1.9
2,826,692	-				-0.6
2,826,751	+				-1.2
2,826,772	+				+0.2
2,826,773	-				+0.0
2,826,894	+		Echvi_2383	0.15	+0.1
2,826,933	-		Echvi_2383	0.17	+0.2
2,826,944	+		Echvi_2383	0.18	-1.6
2,826,950	+		Echvi_2383	0.18	-2.3
2,827,035	+		Echvi_2383	0.22	+0.0
2,827,035	+		Echvi_2383	0.22	+0.6
2,827,036	-		Echvi_2383	0.22	+1.4
2,827,059	+		Echvi_2383	0.23	-1.5
2,827,193	+		Echvi_2383	0.30	+1.8
2,827,193	+		Echvi_2383	0.30	-1.4
2,827,194	-		Echvi_2383	0.30	-1.8
2,827,215	+		Echvi_2383	0.31	+1.0
2,827,215	+				+1.8
2,827,215	+		Echvi_2383	0.31	-0.4
2,827,216	-		Echvi_2383	0.31	-0.2
2,827,217	+		Echvi_2383	0.31	-0.3
2,827,217	+		Echvi_2383	0.31	-2.5
2,827,217	+		Echvi_2383	0.31	-1.1
2,827,218	-		Echvi_2383	0.31	+1.8
2,827,334	+		Echvi_2383	0.37	-0.2
2,827,411	+		Echvi_2383	0.41	+0.8
2,827,412	-		Echvi_2383	0.41	+0.4
2,827,412	-		Echvi_2383	0.41	-0.4
2,827,577	+		Echvi_2383	0.49	-1.2
2,827,600	+		Echvi_2383	0.50	-0.8
2,827,600	+		Echvi_2383	0.50	-0.6
2,827,601	-		Echvi_2383	0.50	-2.3
2,827,601	-		Echvi_2383	0.50	-0.0
2,827,780	-		Echvi_2383	0.59	-0.4
2,827,780	-		Echvi_2383	0.59	+0.6
2,827,785	-		Echvi_2383	0.59	+1.3
2,827,811	+		Echvi_2383	0.60	-1.5
2,827,849	-		Echvi_2383	0.62	+0.2
2,827,853	-		Echvi_2383	0.62	-0.5
2,827,889	+		Echvi_2383	0.64	-1.6
2,827,889	+		Echvi_2383	0.64	+0.7
2,827,890	-		Echvi_2383	0.64	-0.7
2,827,936	+		Echvi_2383	0.66	-0.3
2,827,967	+		Echvi_2383	0.68	+0.0
2,827,987	+		Echvi_2383	0.69	-2.3
2,827,988	-		Echvi_2383	0.69	+0.7
2,827,999	-		Echvi_2383	0.70	+1.3
2,828,195	+		Echvi_2383	0.79	-1.0
2,828,195	+		Echvi_2383	0.79	-2.5
2,828,196	-		Echvi_2383	0.79	-0.9
2,828,196	-		Echvi_2383	0.79	-0.5
2,828,238	+		Echvi_2383	0.81	-1.6
2,828,246	+		Echvi_2383	0.82	-0.5
2,828,246	+		Echvi_2383	0.82	+0.2
2,828,247	-		Echvi_2383	0.82	-3.2
2,828,259	-		Echvi_2383	0.82	-0.1
2,828,339	+		Echvi_2383	0.86	-0.9
2,828,340	-		Echvi_2383	0.86	-0.1
2,828,340	-		Echvi_2383	0.86	+0.1
2,828,446	+				-0.8
2,828,446	+				-0.1
2,828,446	+				+0.2
2,828,447	-				+0.8
2,828,541	-				-0.4
2,828,558	+				-0.3
2,828,596	-				-0.0
2,828,769	+				+0.8
2,828,842	-		Echvi_2384	0.21	+0.5
2,828,861	+		Echvi_2384	0.23	+2.6
2,828,861	+		Echvi_2384	0.23	-1.0
2,828,862	-		Echvi_2384	0.23	+0.1
2,828,903	+		Echvi_2384	0.27	-1.0
2,828,943	-		Echvi_2384	0.31	+0.8
2,829,001	+		Echvi_2384	0.37	+0.5
2,829,001	+		Echvi_2384	0.37	-0.3
2,829,133	+		Echvi_2384	0.51	-1.0
2,829,134	-		Echvi_2384	0.51	+0.7
2,829,134	-		Echvi_2384	0.51	+0.4
2,829,224	+		Echvi_2384	0.60	+0.3
2,829,224	+		Echvi_2384	0.60	+0.8
2,829,225	-		Echvi_2384	0.60	-0.1
2,829,225	-		Echvi_2384	0.60	+0.0
2,829,328	-		Echvi_2384	0.71	-0.7
2,829,359	+		Echvi_2384	0.74	-1.6
2,829,360	-		Echvi_2384	0.74	-1.3
2,829,442	+		Echvi_2384	0.82	+0.8
2,829,442	+		Echvi_2384	0.82	-2.5
2,829,443	-		Echvi_2384	0.82	-0.2
2,829,519	+				-1.9
2,829,547	-				-0.3
2,829,570	+				-1.2
2,829,608	-				+0.2
2,829,615	+				-0.9