Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2263

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,680,732	-				+0.6
2,680,769	+				-0.4
2,680,770	-				-1.2
2,680,770	-				-2.0
2,680,837	+				-0.9
2,680,884	-		Echvi_2263	0.12	-0.8
2,680,944	+		Echvi_2263	0.17	-0.2
2,680,999	+		Echvi_2263	0.21	-2.0
2,681,051	-		Echvi_2263	0.26	-0.4
2,681,052	+		Echvi_2263	0.26	-1.8
2,681,172	+		Echvi_2263	0.36	-2.8
2,681,173	-		Echvi_2263	0.36	-3.4
2,681,174	+		Echvi_2263	0.36	-0.6
2,681,263	+		Echvi_2263	0.43	-3.0
2,681,263	+		Echvi_2263	0.43	-0.3
2,681,264	-		Echvi_2263	0.43	-0.2
2,681,283	+		Echvi_2263	0.45	-0.8
2,681,283	+		Echvi_2263	0.45	-0.6
2,681,303	+		Echvi_2263	0.46	-1.3
2,681,304	-		Echvi_2263	0.46	-3.0
2,681,316	-		Echvi_2263	0.47	+0.0
2,681,328	+		Echvi_2263	0.48	-1.3
2,681,347	+		Echvi_2263	0.50	-0.1
2,681,347	+		Echvi_2263	0.50	-0.5
2,681,354	+		Echvi_2263	0.50	+0.8
2,681,354	+		Echvi_2263	0.50	-1.3
2,681,355	-		Echvi_2263	0.50	-2.3
2,681,374	+		Echvi_2263	0.52	-0.9
2,681,375	-		Echvi_2263	0.52	-1.5
2,681,392	-		Echvi_2263	0.53	-1.9
2,681,471	+		Echvi_2263	0.60	-0.2
2,681,531	+		Echvi_2263	0.65	-0.1
2,681,532	-		Echvi_2263	0.65	-2.6
2,681,535	+		Echvi_2263	0.65	-1.5
2,681,552	-		Echvi_2263	0.66	-2.1
2,681,575	+		Echvi_2263	0.68	-1.4
2,681,645	+		Echvi_2263	0.74	-0.4
2,681,646	-		Echvi_2263	0.74	-0.8
2,681,679	+		Echvi_2263	0.77	-0.5
2,681,680	-		Echvi_2263	0.77	+1.2
2,681,680	-		Echvi_2263	0.77	-0.5
2,681,728	-		Echvi_2263	0.81	-2.0
2,681,917	-				-1.6
2,681,944	-				-1.1
2,681,985	-				-1.3
2,682,027	+				+0.2
2,682,074	+				+2.8
2,682,128	+				+1.2
2,682,128	+				+2.2
2,682,129	-				-0.8
2,682,129	-				-0.0
2,682,154	-				+3.6
2,682,460	+		Echvi_2264	0.27	-0.4
2,682,460	+		Echvi_2264	0.27	+0.8
2,682,460	+		Echvi_2264	0.27	+0.2
2,682,460	+		Echvi_2264	0.27	+0.9
2,682,499	+		Echvi_2264	0.30	-0.5
2,682,499	+		Echvi_2264	0.30	+1.1
2,682,612	-		Echvi_2264	0.37	+0.7
2,682,793	+		Echvi_2264	0.49	+1.1
2,682,793	+		Echvi_2264	0.49	+0.4
2,682,794	-		Echvi_2264	0.49	+0.1
2,682,820	+		Echvi_2264	0.50	-0.2
2,682,820	+		Echvi_2264	0.50	+1.8
2,682,820	+		Echvi_2264	0.50	+0.4
2,682,820	+		Echvi_2264	0.50	-0.4
2,682,821	-		Echvi_2264	0.51	-2.5
2,682,821	-		Echvi_2264	0.51	+1.2
2,682,821	-		Echvi_2264	0.51	-0.4
2,682,824	-		Echvi_2264	0.51	-0.9
2,682,824	-		Echvi_2264	0.51	-0.2
2,682,829	-		Echvi_2264	0.51	-2.3
2,682,830	+		Echvi_2264	0.51	-0.4
2,682,843	+		Echvi_2264	0.52	+0.2
2,682,931	-		Echvi_2264	0.58	-0.3
2,682,942	+		Echvi_2264	0.58	+0.3
2,682,942	+		Echvi_2264	0.58	+1.4
2,682,942	+		Echvi_2264	0.58	+0.3
2,682,943	-		Echvi_2264	0.58	+0.6