Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2252

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,669,097	+		Echvi_2249	0.34	+1.1
2,669,140	-		Echvi_2249	0.52	+0.4
2,669,249	+				+0.0
2,669,249	+				+2.0
2,669,250	-				-1.4
2,669,250	-				-0.6
2,669,295	-		Echvi_2250	0.22	+0.5
2,669,343	+		Echvi_2250	0.46	-0.5
2,669,343	+		Echvi_2250	0.46	-0.5
2,669,343	+		Echvi_2250	0.46	+0.4
2,669,343	+		Echvi_2250	0.46	+0.1
2,669,344	-		Echvi_2250	0.47	-3.4
2,669,344	-		Echvi_2250	0.47	+0.3
2,669,344	-		Echvi_2250	0.47	+0.0
2,669,344	-		Echvi_2250	0.47	+0.3
2,669,344	-		Echvi_2250	0.47	-0.0
2,669,344	-		Echvi_2250	0.47	-0.8
2,669,344	-		Echvi_2250	0.47	+0.4
2,669,344	-		Echvi_2250	0.47	+0.3
2,669,345	+		Echvi_2250	0.47	-0.9
2,669,345	+		Echvi_2250	0.47	-0.4
2,669,345	+		Echvi_2250	0.47	-1.7
2,669,346	-		Echvi_2250	0.48	+0.3
2,669,346	-		Echvi_2250	0.48	-0.3
2,669,357	-		Echvi_2250	0.53	+1.0
2,669,386	+		Echvi_2250	0.68	+1.0
2,669,386	+		Echvi_2250	0.68	+0.0
2,669,424	-		Echvi_2250	0.87	+0.3
2,669,424	-		Echvi_2250	0.87	-0.4
2,669,424	-		Echvi_2250	0.87	+1.3
2,669,456	-				+0.7
2,669,535	+				-0.1
2,669,536	-				+0.8
2,669,572	+				-2.3
2,669,573	-				+0.6
2,669,573	-				+1.4
2,669,575	+				-0.8
2,669,575	+				-0.4
2,669,575	+				+0.7
2,669,576	-				-1.3
2,669,576	-				-2.3
2,669,576	-				+0.5
2,669,576	-				+0.6
2,669,631	-				-0.2
2,669,678	+				+0.2
2,669,678	+				-0.9
2,669,684	+				+0.3
2,669,684	+				-1.5
2,669,685	-				+0.4
2,669,685	-				+0.2
2,669,693	+				+0.8
2,669,698	-				+0.5
2,669,709	+				-0.5
2,669,710	-				-0.7
2,669,743	+				-1.5
2,669,776	-		Echvi_2251	0.14	-0.2
2,669,783	+		Echvi_2251	0.18	-0.0
2,669,792	+		Echvi_2251	0.23	+0.4
2,669,795	+		Echvi_2251	0.24	-0.6
2,669,795	+		Echvi_2251	0.24	+0.7
2,669,796	-		Echvi_2251	0.25	+0.3
2,669,796	-		Echvi_2251	0.25	-0.0
2,669,812	+		Echvi_2251	0.34	-0.4
2,669,812	+		Echvi_2251	0.34	+0.2
2,669,812	+		Echvi_2251	0.34	+2.6
2,669,812	+		Echvi_2251	0.34	+0.4
2,669,812	+		Echvi_2251	0.34	-1.3
2,669,812	+		Echvi_2251	0.34	-1.4
2,669,813	-		Echvi_2251	0.34	-0.0
2,669,813	-		Echvi_2251	0.34	-0.2
2,669,813	-		Echvi_2251	0.34	-0.1
2,669,813	-		Echvi_2251	0.34	-0.2
2,669,815	-				+0.2
2,669,815	-		Echvi_2251	0.36	+0.8
2,669,881	-		Echvi_2251	0.73	-1.5
2,669,881	-		Echvi_2251	0.73	+0.3
2,669,893	-		Echvi_2251	0.80	-0.2
2,669,893	-		Echvi_2251	0.80	-0.2
2,669,926	+				+0.6
2,669,926	+				+1.6
2,669,926	+				-0.2
2,670,014	-				-1.9
2,670,023	+				-0.9
2,670,024	-				+0.3
2,670,098	+				-0.2
2,670,128	-				-1.2
2,670,157	+		Echvi_2252	0.10	-1.0
2,670,374	-		Echvi_2252	0.31	-1.2
2,670,513	+		Echvi_2252	0.44	-1.3
2,670,573	-		Echvi_2252	0.50	-1.2
2,670,639	+		Echvi_2252	0.56	+0.7
2,670,639	+		Echvi_2252	0.56	+0.1
2,670,639	+		Echvi_2252	0.56	+0.3
2,670,672	+		Echvi_2252	0.60	+0.6
2,670,673	-		Echvi_2252	0.60	-2.1
2,670,711	-		Echvi_2252	0.63	+0.6
2,670,773	+		Echvi_2252	0.69	-0.3
2,670,774	-		Echvi_2252	0.69	-1.9
2,670,880	-		Echvi_2252	0.79	-0.6
2,670,896	+		Echvi_2252	0.81	-4.0
2,670,897	-		Echvi_2252	0.81	-2.0
2,670,993	+				-0.5
2,670,996	+				-1.0
2,671,003	-				-1.4
2,671,003	-				-1.4
2,671,074	+				+0.2
2,671,074	+				-0.4
2,671,074	+				+0.8
2,671,074	+				+0.0
2,671,075	-				+0.2
2,671,075	-				-0.3
2,671,075	-				-2.7
2,671,079	+				-0.4
2,671,082	+				-0.4
2,671,082	+				+0.2
2,671,082	+				-0.0
2,671,083	-				-1.6
2,671,106	-				+0.4
2,671,118	+				-1.8
2,671,118	+				-0.8
2,671,119	-				+0.1
2,671,119	-				+0.3
2,671,141	+				-1.9
2,671,141	+				-1.3
2,671,142	-				-0.2
2,671,147	-				+0.4
2,671,155	+				-0.2
2,671,241	+		Echvi_2253	0.17	-1.7
2,671,299	+		Echvi_2253	0.24	-0.8
2,671,300	-		Echvi_2253	0.24	+0.2
2,671,300	-		Echvi_2253	0.24	-0.6
2,671,300	-		Echvi_2253	0.24	-0.7
2,671,301	+		Echvi_2253	0.24	-0.6
2,671,301	+		Echvi_2253	0.24	+1.8
2,671,302	-		Echvi_2253	0.24	-0.5
2,671,395	+		Echvi_2253	0.34	-0.8
2,671,396	-		Echvi_2253	0.34	-1.0
2,671,396	-		Echvi_2253	0.34	-0.8
2,671,396	-		Echvi_2253	0.34	-0.2
2,671,508	+		Echvi_2253	0.46	+0.2
2,671,541	+		Echvi_2253	0.50	-0.8
2,671,542	-		Echvi_2253	0.50	+0.7
2,671,542	-		Echvi_2253	0.50	-1.6
2,671,622	+		Echvi_2253	0.59	-0.9
2,671,645	-		Echvi_2253	0.61	-0.5
2,671,670	+		Echvi_2253	0.64	-1.3
2,671,671	-		Echvi_2253	0.64	-0.2
2,671,710	-		Echvi_2253	0.68	-0.8
2,671,712	-		Echvi_2253	0.68	-1.2
2,671,745	+		Echvi_2253	0.72	-1.3
2,671,746	-		Echvi_2253	0.72	-0.6
2,671,810	+		Echvi_2253	0.79	-1.0
2,671,810	+		Echvi_2253	0.79	-0.6
2,671,850	+		Echvi_2253	0.83	-2.7
2,671,892	+		Echvi_2253	0.88	+0.2
2,671,969	+				-0.0
2,671,974	-				-0.9
2,671,978	+				-1.0
2,671,987	+				+0.1
2,671,987	+				-1.8
2,671,987	+				+0.4
2,671,988	-				-1.3
2,672,017	+				+0.1
2,672,018	-				-1.0
2,672,018	-				+0.6
2,672,024	-				+0.2
2,672,024	-				+0.1
2,672,026	-				-0.4
2,672,030	-				-0.3
2,672,072	+				-2.5
2,672,073	-				-2.0
2,672,073	-				-0.2
2,672,083	-				+0.1
2,672,083	-				+1.0