Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2248

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,667,292	-				+0.4
2,667,318	-				-0.3
2,667,325	+				-1.0
2,667,325	+				+0.5
2,667,326	-				-0.2
2,667,326	-				+0.3
2,667,326	-				-1.2
2,667,326	-				-2.0
2,667,327	+				+1.1
2,667,327	+				+0.1
2,667,327	+				-0.1
2,667,328	-				-0.8
2,667,328	-				+0.4
2,667,328	-				-0.3
2,667,328	-				-0.1
2,667,328	-				-0.3
2,667,328	-				+0.4
2,667,328	-				-0.2
2,667,328	-				-0.1
2,667,332	+				+0.0
2,667,332	+				-0.2
2,667,332	+				+0.1
2,667,338	+				-2.8
2,667,338	+				-2.3
2,667,341	+				+0.2
2,667,371	-				-1.9
2,667,404	-				-0.1
2,667,439	+				-0.4
2,667,493	+				+0.3
2,667,510	-				-1.1
2,667,513	+				+0.3
2,667,530	+				+0.8
2,667,531	-				+0.7
2,667,531	-				-0.4
2,667,556	+				+0.1
2,667,567	-				-1.1
2,667,617	+				-0.3
2,667,633	-				-1.3
2,667,638	+				+2.4
2,667,638	+				+0.0
2,667,639	-				-1.8
2,667,667	-				+1.2
2,667,679	+				+0.1
2,667,679	+				-0.3
2,667,680	-				+0.6
2,667,680	-				-0.6
2,667,680	-				+0.8
2,667,681	+				-0.1
2,667,682	-				+0.9
2,667,682	-				+0.5
2,667,685	+				+0.2
2,667,685	+				-0.4
2,667,685	+				+0.2
2,667,686	-				-0.5
2,667,686	-				+0.7
2,667,865	+		Echvi_2247	0.36	+0.3
2,667,865	+		Echvi_2247	0.36	+0.2
2,667,865	+		Echvi_2247	0.36	-0.5
2,667,866	-		Echvi_2247	0.36	+0.2
2,667,874	-		Echvi_2247	0.37	+0.8
2,667,976	+		Echvi_2247	0.53	+1.8
2,667,999	+		Echvi_2247	0.57	+1.2
2,668,011	+		Echvi_2247	0.59	+0.3
2,668,012	-		Echvi_2247	0.59	-0.8
2,668,125	+		Echvi_2247	0.77	-0.5
2,668,125	+		Echvi_2247	0.77	-0.2
2,668,125	+		Echvi_2247	0.77	-1.3
2,668,125	+		Echvi_2247	0.77	-0.1
2,668,136	-		Echvi_2247	0.79	-1.0
2,668,143	+		Echvi_2247	0.80	+0.6
2,668,202	-		Echvi_2247	0.89	-0.4
2,668,202	-		Echvi_2247	0.89	+1.0
2,668,202	-		Echvi_2247	0.89	-0.4
2,668,207	-				-0.2
2,668,308	-				-1.4
2,668,333	+				-0.8
2,668,408	+		Echvi_2248	0.24	+0.0
2,668,408	+		Echvi_2248	0.24	+0.0
2,668,411	-		Echvi_2248	0.24	+1.1
2,668,432	-		Echvi_2248	0.29	+1.0
2,668,559	+		Echvi_2248	0.54	+0.6
2,668,581	+		Echvi_2248	0.59	+1.5
2,668,656	+		Echvi_2248	0.74	-1.2
2,668,673	-		Echvi_2248	0.78	-0.2
2,668,673	-		Echvi_2248	0.78	-1.3
2,668,676	-		Echvi_2248	0.78	+0.8
2,668,676	-		Echvi_2248	0.78	+0.6
2,668,706	+		Echvi_2248	0.84	+1.1
2,668,706	+		Echvi_2248	0.84	+0.7
2,668,707	-		Echvi_2248	0.85	+0.5
2,668,709	-		Echvi_2248	0.85	+0.6
2,668,769	+				+0.8
2,668,770	-				+0.2
2,668,770	-				-1.8
2,668,770	-				-2.5
2,668,785	-				+0.2
2,668,790	+				-0.2
2,668,795	+				+1.8
2,668,880	+				-0.6
2,668,881	-				-0.5
2,668,881	-				+0.6
2,668,884	-				-0.1
2,668,884	-				-0.0
2,668,915	+				-0.9
2,668,916	-				-0.8
2,668,916	-				+0.6
2,668,995	+				+0.7
2,668,996	-				+1.0
2,669,001	+				-0.1
2,669,097	+		Echvi_2249	0.34	+1.1
2,669,140	-		Echvi_2249	0.52	+0.4
2,669,249	+				+0.0
2,669,249	+				+2.0
2,669,250	-				-1.4
2,669,250	-				-0.6
2,669,295	-		Echvi_2250	0.22	+0.5
2,669,343	+		Echvi_2250	0.46	-0.5
2,669,343	+		Echvi_2250	0.46	-0.5
2,669,343	+		Echvi_2250	0.46	+0.4
2,669,343	+		Echvi_2250	0.46	+0.1
2,669,344	-		Echvi_2250	0.47	-3.4
2,669,344	-		Echvi_2250	0.47	+0.3
2,669,344	-		Echvi_2250	0.47	+0.0
2,669,344	-		Echvi_2250	0.47	+0.3
2,669,344	-		Echvi_2250	0.47	-0.0
2,669,344	-		Echvi_2250	0.47	-0.8
2,669,344	-		Echvi_2250	0.47	+0.4
2,669,344	-		Echvi_2250	0.47	+0.3
2,669,345	+		Echvi_2250	0.47	-0.9
2,669,345	+		Echvi_2250	0.47	-0.4
2,669,345	+		Echvi_2250	0.47	-1.7
2,669,346	-		Echvi_2250	0.48	+0.3
2,669,346	-		Echvi_2250	0.48	-0.3
2,669,357	-		Echvi_2250	0.53	+1.0
2,669,386	+		Echvi_2250	0.68	+1.0
2,669,386	+		Echvi_2250	0.68	+0.0
2,669,424	-		Echvi_2250	0.87	+0.3
2,669,424	-		Echvi_2250	0.87	-0.4
2,669,424	-		Echvi_2250	0.87	+1.3
2,669,456	-				+0.7
2,669,535	+				-0.1
2,669,536	-				+0.8
2,669,572	+				-2.3
2,669,573	-				+0.6
2,669,573	-				+1.4
2,669,575	+				-0.8
2,669,575	+				-0.4
2,669,575	+				+0.7
2,669,576	-				-1.3
2,669,576	-				-2.3
2,669,576	-				+0.5
2,669,576	-				+0.6
2,669,631	-				-0.2
2,669,678	+				+0.2
2,669,678	+				-0.9
2,669,684	+				+0.3
2,669,684	+				-1.5
2,669,685	-				+0.4
2,669,685	-				+0.2
2,669,693	+				+0.8
2,669,698	-				+0.5
2,669,709	+				-0.5
2,669,710	-				-0.7
2,669,743	+				-1.5
2,669,776	-		Echvi_2251	0.14	-0.2