Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2246

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,666,041	-		Echvi_2242	0.38	-0.8
2,666,203	+		Echvi_2243	0.19	+1.8
2,666,203	+		Echvi_2243	0.19	+0.7
2,666,263	+		Echvi_2243	0.47	+0.4
2,666,280	+		Echvi_2243	0.55	+1.7
2,666,283	-		Echvi_2243	0.56	+0.3
2,666,288	-		Echvi_2243	0.59	-0.8
2,666,349	+		Echvi_2243	0.87	-0.1
2,666,404	+				+1.0
2,666,490	-		Echvi_2244	0.24	-0.2
2,666,581	-		Echvi_2244	0.86	+0.8
2,666,599	-				-0.2
2,666,603	+				+1.0
2,666,604	-				-0.8
2,666,604	-				-2.0
2,666,642	+				-2.2
2,666,681	+		Echvi_2245	0.27	-2.0
2,666,693	+		Echvi_2245	0.33	-1.5
2,666,808	+				+0.3
2,666,839	+				+1.1
2,666,860	+				-0.8
2,666,892	-				-0.9
2,666,938	-				-0.3
2,666,938	-				+1.2
2,666,938	-				+0.4
2,666,938	-				+0.4
2,666,938	-				-0.4
2,666,938	-				-0.0
2,666,940	-				-0.0
2,666,968	+				-0.4
2,666,979	+				+0.8
2,666,979	+				-1.1
2,666,989	-				-1.8
2,666,989	-				-1.6
2,667,004	+				-0.3
2,667,004	+				-0.2
2,667,004	+				+0.4
2,667,005	-				+0.1
2,667,006	+				+0.7
2,667,006	+				+1.1
2,667,006	+				-0.2
2,667,009	-				+0.1
2,667,015	+				+0.2
2,667,016	-		Echvi_2246	0.10	-1.1
2,667,197	-				+0.4
2,667,208	-				-0.2
2,667,208	-				-0.4
2,667,253	+				-0.7
2,667,280	-				+0.1
2,667,292	-				+0.4
2,667,318	-				-0.3
2,667,325	+				-1.0
2,667,325	+				+0.5
2,667,326	-				-0.2
2,667,326	-				+0.3
2,667,326	-				-1.2
2,667,326	-				-2.0
2,667,327	+				+1.1
2,667,327	+				+0.1
2,667,327	+				-0.1
2,667,328	-				-0.8
2,667,328	-				+0.4
2,667,328	-				-0.3
2,667,328	-				-0.1
2,667,328	-				-0.3
2,667,328	-				+0.4
2,667,328	-				-0.2
2,667,328	-				-0.1
2,667,332	+				+0.0
2,667,332	+				-0.2
2,667,332	+				+0.1
2,667,338	+				-2.8
2,667,338	+				-2.3
2,667,341	+				+0.2
2,667,371	-				-1.9
2,667,404	-				-0.1
2,667,439	+				-0.4
2,667,493	+				+0.3
2,667,510	-				-1.1
2,667,513	+				+0.3
2,667,530	+				+0.8
2,667,531	-				+0.7
2,667,531	-				-0.4
2,667,556	+				+0.1
2,667,567	-				-1.1
2,667,617	+				-0.3
2,667,633	-				-1.3
2,667,638	+				+2.4
2,667,638	+				+0.0
2,667,639	-				-1.8
2,667,667	-				+1.2
2,667,679	+				+0.1
2,667,679	+				-0.3
2,667,680	-				+0.6
2,667,680	-				-0.6
2,667,680	-				+0.8
2,667,681	+				-0.1
2,667,682	-				+0.9
2,667,682	-				+0.5
2,667,685	+				+0.2
2,667,685	+				-0.4
2,667,685	+				+0.2
2,667,686	-				-0.5
2,667,686	-				+0.7
2,667,865	+		Echvi_2247	0.36	+0.3
2,667,865	+		Echvi_2247	0.36	+0.2
2,667,865	+		Echvi_2247	0.36	-0.5
2,667,866	-		Echvi_2247	0.36	+0.2
2,667,874	-		Echvi_2247	0.37	+0.8
2,667,976	+		Echvi_2247	0.53	+1.8
2,667,999	+		Echvi_2247	0.57	+1.2
2,668,011	+		Echvi_2247	0.59	+0.3
2,668,012	-		Echvi_2247	0.59	-0.8
2,668,125	+		Echvi_2247	0.77	-0.5
2,668,125	+		Echvi_2247	0.77	-0.2
2,668,125	+		Echvi_2247	0.77	-1.3
2,668,125	+		Echvi_2247	0.77	-0.1
2,668,136	-		Echvi_2247	0.79	-1.0
2,668,143	+		Echvi_2247	0.80	+0.6