Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2224

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,646,903	-		Echvi_2221	0.18	-0.9
2,646,939	-		Echvi_2221	0.27	-0.5
2,646,998	+		Echvi_2221	0.41	-0.8
2,646,998	+		Echvi_2221	0.41	+0.9
2,646,998	+		Echvi_2221	0.41	+0.7
2,646,999	-		Echvi_2221	0.41	-1.4
2,647,154	+		Echvi_2221	0.78	-0.6
2,647,154	+		Echvi_2221	0.78	-1.2
2,647,163	+		Echvi_2221	0.80	-0.0
2,647,172	-		Echvi_2221	0.82	-0.2
2,647,211	-				-1.5
2,647,245	+				-0.5
2,647,245	+				+0.3
2,647,250	+				-1.2
2,647,250	+				-0.5
2,647,250	+				+0.1
2,647,250	+				-0.2
2,647,251	-				+0.6
2,647,251	-				-0.9
2,647,251	-				+0.2
2,647,251	-				+0.4
2,647,251	-				-1.4
2,647,251	-				+0.1
2,647,251	-				-0.2
2,647,264	+				+0.4
2,647,265	-				-0.6
2,647,275	+				+1.4
2,647,346	-		Echvi_2222	0.29	+0.7
2,647,371	+		Echvi_2222	0.43	-0.1
2,647,371	+		Echvi_2222	0.43	+0.4
2,647,372	-		Echvi_2222	0.44	+1.2
2,647,399	+		Echvi_2222	0.59	+1.3
2,647,486	+				+0.8
2,647,487	-				-0.6
2,647,487	-				-0.8
2,647,489	+				+0.2
2,647,542	-				+0.5
2,647,587	-		Echvi_2223	0.23	-2.1
2,647,592	-		Echvi_2223	0.25	-0.9
2,647,615	+		Echvi_2223	0.32	-0.7
2,647,631	+		Echvi_2223	0.37	-0.1
2,647,631	+		Echvi_2223	0.37	-0.2
2,647,634	-		Echvi_2223	0.38	-0.7
2,647,667	+		Echvi_2223	0.48	+0.5
2,647,667	+		Echvi_2223	0.48	-0.6
2,647,687	+		Echvi_2223	0.54	+0.2
2,647,701	+		Echvi_2223	0.59	+0.3
2,647,701	+		Echvi_2223	0.59	+0.8
2,647,727	+		Echvi_2223	0.67	+0.7
2,647,800	-				-0.0
2,647,815	+				-1.2
2,647,881	-				-0.4
2,647,895	+		Echvi_2224	0.10	-0.6
2,647,896	-		Echvi_2224	0.11	-1.4
2,647,896	-		Echvi_2224	0.11	-3.0
2,647,896	-		Echvi_2224	0.11	-1.1
2,647,896	-		Echvi_2224	0.11	+1.2
2,647,996	+				+0.8
2,648,038	+				-2.1
2,648,064	-				+0.4
2,648,068	-				-2.0
2,648,068	-				-0.3
2,648,068	-				-1.4
2,648,068	-				-0.5
2,648,090	+				+2.5
2,648,099	+				-2.0
2,648,099	+				+0.6
2,648,127	-				-0.6
2,648,950	-		Echvi_2225	0.48	-1.0
2,648,950	-		Echvi_2225	0.48	+1.4