Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2217

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,642,218	+		Echvi_2215	0.20	-3.3
2,642,230	+		Echvi_2215	0.22	-2.1
2,642,230	+		Echvi_2215	0.22	-1.9
2,642,236	+		Echvi_2215	0.23	-1.3
2,642,239	+		Echvi_2215	0.23	-2.1
2,642,255	+		Echvi_2215	0.25	+1.8
2,642,256	-		Echvi_2215	0.25	-1.3
2,642,301	+		Echvi_2215	0.32	-2.1
2,642,302	-		Echvi_2215	0.32	-3.3
2,642,302	-		Echvi_2215	0.32	-3.0
2,642,302	-		Echvi_2215	0.32	-1.3
2,642,350	+		Echvi_2215	0.39	-0.6
2,642,351	-		Echvi_2215	0.39	-2.8
2,642,353	+		Echvi_2215	0.40	-0.9
2,642,353	+		Echvi_2215	0.40	-1.3
2,642,545	+		Echvi_2215	0.68	-0.2
2,642,549	+		Echvi_2215	0.68	-1.7
2,642,549	+		Echvi_2215	0.68	-3.0
2,642,549	+		Echvi_2215	0.68	-0.5
2,642,549	+		Echvi_2215	0.68	-1.3
2,642,550	-		Echvi_2215	0.68	-3.6
2,642,550	-		Echvi_2215	0.68	-2.4
2,642,550	-		Echvi_2215	0.68	-1.2
2,642,586	-		Echvi_2215	0.74	-1.3
2,642,605	+		Echvi_2215	0.76	-0.5
2,642,653	+		Echvi_2215	0.83	+0.2
2,642,685	+		Echvi_2215	0.88	-3.6
2,642,717	+				-2.8
2,642,718	-				-1.5
2,643,217	-				-0.1
2,643,430	-		Echvi_2217	0.26	-0.6
2,643,456	-		Echvi_2217	0.29	-2.1
2,643,606	-		Echvi_2217	0.47	-0.5
2,643,700	-		Echvi_2217	0.58	+0.8
2,643,742	-		Echvi_2217	0.63	-1.6
2,643,942	-		Echvi_2217	0.87	-0.2
2,643,942	-		Echvi_2217	0.87	-1.6
2,643,986	-				-0.4
2,643,986	-				-0.3
2,644,094	-				+0.2
2,644,174	-		Echvi_2218	0.21	-0.0
2,644,307	-		Echvi_2218	0.44	+2.0
2,644,470	-		Echvi_2218	0.71	+0.4
2,644,661	-				+0.2
2,644,663	-				+0.5
2,644,682	-				-0.5
2,644,722	+				-0.8
2,644,739	+				-1.3
2,644,740	-				+1.6
2,644,837	+		Echvi_2219	0.29	-1.6
2,644,962	-		Echvi_2219	0.54	+0.2
2,644,971	-		Echvi_2219	0.56	+0.1