Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2188

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,613,872	+		Echvi_2187	0.33	+0.2
2,613,880	+		Echvi_2187	0.33	+0.2
2,613,880	+		Echvi_2187	0.33	-0.8
2,613,880	+		Echvi_2187	0.33	+0.6
2,613,880	+		Echvi_2187	0.33	+1.0
2,613,881	-		Echvi_2187	0.34	-0.6
2,613,881	-		Echvi_2187	0.34	+1.1
2,613,881	-		Echvi_2187	0.34	-0.8
2,613,907	+		Echvi_2187	0.36	-0.1
2,613,907	+		Echvi_2187	0.36	-0.8
2,613,911	+		Echvi_2187	0.36	-0.6
2,613,911	+		Echvi_2187	0.36	+0.4
2,613,911	+		Echvi_2187	0.36	-0.7
2,613,912	-		Echvi_2187	0.36	-0.4
2,613,912	-		Echvi_2187	0.36	+0.1
2,613,912	-		Echvi_2187	0.36	-0.3
2,613,912	-		Echvi_2187	0.36	+1.3
2,613,915	+		Echvi_2187	0.36	+1.4
2,613,988	+		Echvi_2187	0.42	+0.7
2,613,989	-		Echvi_2187	0.42	-0.1
2,613,989	-		Echvi_2187	0.42	-0.1
2,613,992	-		Echvi_2187	0.42	-0.4
2,614,127	-		Echvi_2187	0.53	-0.4
2,614,179	-		Echvi_2187	0.57	-0.2
2,614,186	+		Echvi_2187	0.58	-0.3
2,614,186	+		Echvi_2187	0.58	+0.6
2,614,186	+		Echvi_2187	0.58	+0.0
2,614,186	+		Echvi_2187	0.58	+0.7
2,614,187	-		Echvi_2187	0.58	-0.8
2,614,187	-		Echvi_2187	0.58	-0.4
2,614,187	-		Echvi_2187	0.58	-0.2
2,614,219	+		Echvi_2187	0.61	-0.1
2,614,220	-		Echvi_2187	0.61	-0.8
2,614,220	-		Echvi_2187	0.61	-1.7
2,614,220	-		Echvi_2187	0.61	+1.1
2,614,220	-		Echvi_2187	0.61	+0.1
2,614,279	+		Echvi_2187	0.65	-0.1
2,614,280	-		Echvi_2187	0.66	-0.1
2,614,280	-		Echvi_2187	0.66	-1.0
2,614,321	+		Echvi_2187	0.69	-0.4
2,614,321	+		Echvi_2187	0.69	+0.8
2,614,366	+		Echvi_2187	0.72	-0.5
2,614,383	-		Echvi_2187	0.74	-2.7
2,614,383	-		Echvi_2187	0.74	+0.8
2,614,462	+		Echvi_2187	0.80	+0.5
2,614,462	+		Echvi_2187	0.80	+0.7
2,614,463	-		Echvi_2187	0.80	+1.0
2,614,463	-		Echvi_2187	0.80	-0.4
2,614,463	-		Echvi_2187	0.80	-0.6
2,614,472	+		Echvi_2187	0.81	-0.4
2,614,472	+		Echvi_2187	0.81	-2.2
2,614,472	+		Echvi_2187	0.81	-1.0
2,614,473	-		Echvi_2187	0.81	-0.6
2,614,473	-		Echvi_2187	0.81	-0.8
2,614,475	-		Echvi_2187	0.81	-0.4
2,614,613	+				-0.9
2,614,659	+				+0.2
2,614,662	+				+0.4
2,614,663	-				+0.4
2,614,673	+				-0.7
2,614,710	-				-1.0
2,614,765	-				+0.1
2,614,768	+				+0.3
2,614,768	+				+0.9
2,614,768	+				+1.3
2,614,770	+				+0.2
2,614,770	+				-0.8
2,614,812	+				-1.0
2,614,812	+				+0.5
2,614,813	-				-1.6
2,614,814	+				+0.3
2,614,815	-				-0.5
2,614,837	+		Echvi_2188	0.10	-0.6
2,614,837	+		Echvi_2188	0.10	+0.8
2,614,837	+		Echvi_2188	0.10	-1.1
2,614,859	+		Echvi_2188	0.13	-2.5
2,614,914	+		Echvi_2188	0.20	+1.8
2,614,925	+		Echvi_2188	0.21	+3.4
2,614,925	+		Echvi_2188	0.21	-0.2
2,614,925	+		Echvi_2188	0.21	-1.4
2,614,925	+		Echvi_2188	0.21	+1.8
2,614,925	+		Echvi_2188	0.21	+1.2
2,614,926	-		Echvi_2188	0.21	+0.0
2,614,929	+		Echvi_2188	0.22	+0.3
2,614,930	-		Echvi_2188	0.22	-3.0
2,614,934	-		Echvi_2188	0.23	-0.8
2,614,934	-		Echvi_2188	0.23	-0.9
2,615,047	+		Echvi_2188	0.37	-2.6
2,615,047	+		Echvi_2188	0.37	-0.2
2,615,052	+		Echvi_2188	0.38	-0.8
2,615,053	-		Echvi_2188	0.38	-0.4
2,615,053	-		Echvi_2188	0.38	-0.8
2,615,123	+		Echvi_2188	0.47	+0.7
2,615,124	-		Echvi_2188	0.47	-0.7
2,615,154	+		Echvi_2188	0.51	-2.6
2,615,173	-		Echvi_2188	0.53	-0.6
2,615,173	-		Echvi_2188	0.53	-0.2
2,615,182	-		Echvi_2188	0.54	-1.2
2,615,182	-		Echvi_2188	0.54	-1.4
2,615,207	-		Echvi_2188	0.58	-1.6
2,615,209	-		Echvi_2188	0.58	-0.2
2,615,255	+		Echvi_2188	0.64	-0.8
2,615,284	-		Echvi_2188	0.68	-0.6
2,615,296	+		Echvi_2188	0.69	-1.2
2,615,297	-		Echvi_2188	0.69	-0.6
2,615,297	-		Echvi_2188	0.69	-1.1
2,615,399	+		Echvi_2188	0.82	-0.2
2,615,399	+		Echvi_2188	0.82	-0.6
2,615,460	+				+0.2
2,615,460	+				-0.3
2,615,516	-				-0.6
2,615,553	-				-0.3
2,615,553	-				-0.2
2,615,579	-				-0.8
2,615,672	+		Echvi_2189	0.29	-0.5
2,615,695	-		Echvi_2189	0.35	-0.8
2,615,748	+		Echvi_2189	0.47	-0.9
2,615,762	+		Echvi_2189	0.50	+0.8
2,615,762	+		Echvi_2189	0.50	+0.8
2,615,762	+		Echvi_2189	0.50	+0.1
2,615,763	-		Echvi_2189	0.50	-1.2
2,615,816	+		Echvi_2189	0.62	-1.4
2,615,829	+		Echvi_2189	0.65	-0.9
2,615,829	+		Echvi_2189	0.65	-0.5
2,615,829	+		Echvi_2189	0.65	+0.2
2,615,830	-		Echvi_2189	0.65	-1.6
2,615,830	-		Echvi_2189	0.65	+0.2
2,615,831	+		Echvi_2189	0.65	-0.3
2,615,841	+		Echvi_2189	0.67	-0.3
2,615,861	+		Echvi_2189	0.72	-0.9
2,615,884	+		Echvi_2189	0.77	+1.4
2,615,884	+		Echvi_2189	0.77	-0.2
2,615,885	-		Echvi_2189	0.77	-1.9
2,615,909	+		Echvi_2189	0.83	+0.1
2,615,915	-		Echvi_2189	0.84	+2.0
2,615,921	+		Echvi_2189	0.86	+0.3
2,615,922	-		Echvi_2189	0.86	+1.9
2,615,922	-		Echvi_2189	0.86	-0.2
2,615,922	-		Echvi_2189	0.86	-0.1
2,615,963	-				-0.0
2,615,968	+				+0.1
2,615,968	+				+0.7
2,616,000	-				+1.0
2,616,022	-				+0.4
2,616,022	-				-0.9
2,616,022	-				+0.1
2,616,025	+				+0.8
2,616,025	+				-2.2
2,616,025	+				-0.6
2,616,025	+				+0.1
2,616,025	+				-0.2
2,616,025	+				-0.8
2,616,026	-				+0.6
2,616,026	-				-1.3
2,616,026	-				+0.8
2,616,026	-				+0.4
2,616,026	-				-0.3
2,616,026	-				-0.1
2,616,026	-				-1.2
2,616,060	-				-1.5
2,616,111	-				-1.6
2,616,112	+				-1.2
2,616,118	+				-1.1
2,616,119	-				-1.2
2,616,193	+				-0.4
2,616,287	+				-1.1
2,616,287	+				+0.0
2,616,362	-				+2.3
2,616,362	-				-0.0