Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2028

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,388,592	+				-0.8
2,388,593	-				+1.2
2,388,596	+				-0.2
2,388,614	+				+0.2
2,388,642	-				+0.0
2,388,652	-				+0.3
2,388,669	+				-0.5
2,388,670	-				-0.4
2,388,689	+		Echvi_2027	0.11	-0.3
2,388,689	+		Echvi_2027	0.11	+0.7
2,388,690	-		Echvi_2027	0.11	+0.7
2,388,690	-		Echvi_2027	0.11	+0.4
2,388,690	-		Echvi_2027	0.11	-1.0
2,388,716	-		Echvi_2027	0.15	+0.8
2,388,738	-		Echvi_2027	0.17	+0.3
2,388,738	-		Echvi_2027	0.17	-0.6
2,388,774	+		Echvi_2027	0.21	-0.2
2,388,774	+		Echvi_2027	0.21	+0.0
2,388,774	+		Echvi_2027	0.21	+0.2
2,388,775	-		Echvi_2027	0.21	+0.8
2,388,775	-		Echvi_2027	0.21	+0.6
2,388,775	-		Echvi_2027	0.21	+1.7
2,388,778	+		Echvi_2027	0.22	+0.1
2,388,778	+		Echvi_2027	0.22	-1.5
2,388,778	+		Echvi_2027	0.22	-0.6
2,388,778	+		Echvi_2027	0.22	-1.2
2,388,779	-		Echvi_2027	0.22	+0.4
2,388,779	-		Echvi_2027	0.22	-1.1
2,388,779	-		Echvi_2027	0.22	+2.8
2,388,842	-		Echvi_2027	0.29	+1.1
2,388,842	-		Echvi_2027	0.29	-0.9
2,388,842	-		Echvi_2027	0.29	+1.7
2,388,893	+		Echvi_2027	0.35	+1.0
2,388,893	+		Echvi_2027	0.35	-1.2
2,388,893	+		Echvi_2027	0.35	+1.3
2,388,894	-		Echvi_2027	0.35	+0.1
2,388,897	-		Echvi_2027	0.36	+0.2
2,388,939	-		Echvi_2027	0.40	+0.2
2,389,040	+		Echvi_2027	0.52	+0.2
2,389,040	+		Echvi_2027	0.52	-0.7
2,389,041	-		Echvi_2027	0.52	-1.3
2,389,042	+		Echvi_2027	0.52	-1.0
2,389,042	+		Echvi_2027	0.52	-0.1
2,389,065	+		Echvi_2027	0.55	-0.8
2,389,066	-		Echvi_2027	0.55	+0.2
2,389,066	-		Echvi_2027	0.55	+1.3
2,389,097	+		Echvi_2027	0.59	+0.6
2,389,097	+		Echvi_2027	0.59	-1.1
2,389,098	-		Echvi_2027	0.59	+1.9
2,389,115	+		Echvi_2027	0.61	-2.7
2,389,116	-		Echvi_2027	0.61	-0.9
2,389,174	+		Echvi_2027	0.68	-0.5
2,389,174	+		Echvi_2027	0.68	+1.1
2,389,175	-		Echvi_2027	0.68	+0.4
2,389,177	-		Echvi_2027	0.68	+1.8
2,389,224	+		Echvi_2027	0.74	-0.3
2,389,422	-				+0.0
2,389,451	+				+0.0
2,389,451	+				+0.5
2,389,451	+				+0.3
2,389,452	-				-0.8
2,389,586	+				+1.2
2,389,608	+				+1.2
2,389,609	-				-0.8
2,389,617	+				+0.8
2,389,617	+				+0.8
2,389,617	+				+0.9
2,389,617	+				+1.4
2,389,617	+				+0.6
2,389,618	-				+0.9
2,389,618	-				+0.2
2,389,618	-				+0.2
2,389,618	-				+1.1
2,389,618	-				-1.5
2,389,713	-		Echvi_2028	0.14	-1.2
2,389,785	+		Echvi_2028	0.22	+0.8
2,389,838	+		Echvi_2028	0.28	-0.9
2,389,838	+		Echvi_2028	0.28	-1.0
2,389,838	+		Echvi_2028	0.28	-0.3
2,389,838	+		Echvi_2028	0.28	+0.5
2,389,838	+		Echvi_2028	0.28	-0.5
2,389,839	-		Echvi_2028	0.28	+0.7
2,389,843	+		Echvi_2028	0.29	+1.5
2,389,844	-		Echvi_2028	0.29	+0.2
2,389,844	-		Echvi_2028	0.29	+0.1
2,389,951	-		Echvi_2028	0.41	-1.9
2,389,956	-		Echvi_2028	0.41	+1.1
2,389,956	-		Echvi_2028	0.41	-2.5
2,389,987	+		Echvi_2028	0.45	+0.0
2,390,114	+		Echvi_2028	0.59	-1.1
2,390,115	-		Echvi_2028	0.59	+0.7
2,390,115	-		Echvi_2028	0.59	+1.5
2,390,115	-		Echvi_2028	0.59	+0.4
2,390,139	+		Echvi_2028	0.62	-0.3
2,390,159	+		Echvi_2028	0.64	-0.6
2,390,159	+		Echvi_2028	0.64	+0.6
2,390,196	+		Echvi_2028	0.68	+0.3
2,390,197	-		Echvi_2028	0.68	-1.2
2,390,197	-		Echvi_2028	0.68	+0.9
2,390,429	-				+0.5
2,390,443	-				-1.3
2,390,447	-				-1.2
2,390,471	+				-0.7
2,390,500	+				-0.4
2,390,507	+				-0.9
2,390,507	+				-0.8
2,390,510	-				-0.6
2,390,515	+				-0.5
2,390,516	-				-0.4
2,390,537	+		Echvi_2029	0.23	-0.5
2,390,537	+		Echvi_2029	0.23	+0.8
2,390,537	+		Echvi_2029	0.23	-0.5
2,390,538	-		Echvi_2029	0.24	-0.3
2,390,590	+		Echvi_2029	0.59	-0.2
2,390,590	+		Echvi_2029	0.59	-0.5
2,390,591	-		Echvi_2029	0.59	-0.1
2,390,594	-		Echvi_2029	0.61	+0.7
2,390,603	-		Echvi_2029	0.67	+0.1
2,390,616	-		Echvi_2029	0.76	-1.4
2,390,620	+		Echvi_2029	0.79	-0.3
2,390,621	-		Echvi_2029	0.79	-0.4
2,390,667	+				-0.2
2,390,696	+				+0.2
2,390,697	-				-0.2
2,390,704	-				+0.4
2,390,741	+				+0.5
2,390,759	+				-0.1
2,390,773	-				+1.4
2,390,773	-				-1.1
2,390,810	+				-1.6
2,390,810	+				+1.0
2,390,810	+				-1.4
2,390,811	-				+0.0
2,390,817	+		Echvi_2030	0.11	+0.4
2,390,843	+		Echvi_2030	0.15	+2.7
2,390,861	-		Echvi_2030	0.17	-0.4
2,390,975	-		Echvi_2030	0.35	-0.5
2,391,076	+		Echvi_2030	0.51	-0.1
2,391,083	-		Echvi_2030	0.52	-0.0
2,391,084	+		Echvi_2030	0.53	-0.1
2,391,084	+		Echvi_2030	0.53	+0.2
2,391,217	+		Echvi_2030	0.73	-0.6
2,391,262	-		Echvi_2030	0.81	-0.3
2,391,284	-		Echvi_2030	0.84	-0.2
2,391,317	-		Echvi_2030	0.89	-0.7
2,391,317	-				+0.2
2,391,317	-		Echvi_2030	0.89	-1.0
2,391,328	+				+0.2
2,391,329	-				+0.8
2,391,345	-				-1.1
2,391,345	-				+1.0
2,391,345	-				+0.6
2,391,345	-				-1.4
2,391,347	-				-0.4
2,391,374	+				-0.1
2,391,375	-				-1.5
2,391,417	-				+0.1
2,391,427	-				+1.6
2,391,427	-				-0.3
2,391,464	+				+0.2