Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2027

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,387,726	-				-1.2
2,387,775	+				-0.4
2,387,783	+				-0.5
2,387,783	+				-0.8
2,387,908	+		Echvi_2026	0.18	+0.4
2,387,909	-		Echvi_2026	0.18	-1.1
2,387,945	-		Echvi_2026	0.22	+0.9
2,387,945	-		Echvi_2026	0.22	+0.4
2,387,959	+		Echvi_2026	0.24	-0.3
2,388,111	-		Echvi_2026	0.42	+0.9
2,388,134	+		Echvi_2026	0.45	+0.5
2,388,135	-		Echvi_2026	0.45	+2.8
2,388,135	-		Echvi_2026	0.45	-0.5
2,388,135	-		Echvi_2026	0.45	-0.7
2,388,150	+		Echvi_2026	0.47	-0.5
2,388,150	+		Echvi_2026	0.47	+1.0
2,388,150	+		Echvi_2026	0.47	+0.5
2,388,150	+		Echvi_2026	0.47	-0.7
2,388,293	-		Echvi_2026	0.64	+0.2
2,388,293	-		Echvi_2026	0.64	-0.4
2,388,387	+		Echvi_2026	0.76	+0.5
2,388,592	+				-0.8
2,388,593	-				+1.2
2,388,596	+				-0.2
2,388,614	+				+0.2
2,388,642	-				+0.0
2,388,652	-				+0.3
2,388,669	+				-0.5
2,388,670	-				-0.4
2,388,689	+		Echvi_2027	0.11	-0.3
2,388,689	+		Echvi_2027	0.11	+0.7
2,388,690	-		Echvi_2027	0.11	+0.7
2,388,690	-		Echvi_2027	0.11	+0.4
2,388,690	-		Echvi_2027	0.11	-1.0
2,388,716	-		Echvi_2027	0.15	+0.8
2,388,738	-		Echvi_2027	0.17	+0.3
2,388,738	-		Echvi_2027	0.17	-0.6
2,388,774	+		Echvi_2027	0.21	-0.2
2,388,774	+		Echvi_2027	0.21	+0.0
2,388,774	+		Echvi_2027	0.21	+0.2
2,388,775	-		Echvi_2027	0.21	+0.8
2,388,775	-		Echvi_2027	0.21	+0.6
2,388,775	-		Echvi_2027	0.21	+1.7
2,388,778	+		Echvi_2027	0.22	+0.1
2,388,778	+		Echvi_2027	0.22	-1.5
2,388,778	+		Echvi_2027	0.22	-0.6
2,388,778	+		Echvi_2027	0.22	-1.2
2,388,779	-		Echvi_2027	0.22	+0.4
2,388,779	-		Echvi_2027	0.22	-1.1
2,388,779	-		Echvi_2027	0.22	+2.8
2,388,842	-		Echvi_2027	0.29	+1.1
2,388,842	-		Echvi_2027	0.29	-0.9
2,388,842	-		Echvi_2027	0.29	+1.7
2,388,893	+		Echvi_2027	0.35	+1.0
2,388,893	+		Echvi_2027	0.35	-1.2
2,388,893	+		Echvi_2027	0.35	+1.3
2,388,894	-		Echvi_2027	0.35	+0.1
2,388,897	-		Echvi_2027	0.36	+0.2
2,388,939	-		Echvi_2027	0.40	+0.2
2,389,040	+		Echvi_2027	0.52	+0.2
2,389,040	+		Echvi_2027	0.52	-0.7
2,389,041	-		Echvi_2027	0.52	-1.3
2,389,042	+		Echvi_2027	0.52	-1.0
2,389,042	+		Echvi_2027	0.52	-0.1
2,389,065	+		Echvi_2027	0.55	-0.8
2,389,066	-		Echvi_2027	0.55	+0.2
2,389,066	-		Echvi_2027	0.55	+1.3
2,389,097	+		Echvi_2027	0.59	+0.6
2,389,097	+		Echvi_2027	0.59	-1.1
2,389,098	-		Echvi_2027	0.59	+1.9
2,389,115	+		Echvi_2027	0.61	-2.7
2,389,116	-		Echvi_2027	0.61	-0.9
2,389,174	+		Echvi_2027	0.68	-0.5
2,389,174	+		Echvi_2027	0.68	+1.1
2,389,175	-		Echvi_2027	0.68	+0.4
2,389,177	-		Echvi_2027	0.68	+1.8
2,389,224	+		Echvi_2027	0.74	-0.3
2,389,422	-				+0.0
2,389,451	+				+0.0
2,389,451	+				+0.5
2,389,451	+				+0.3
2,389,452	-				-0.8
2,389,586	+				+1.2
2,389,608	+				+1.2
2,389,609	-				-0.8
2,389,617	+				+0.8
2,389,617	+				+0.8
2,389,617	+				+0.9
2,389,617	+				+1.4
2,389,617	+				+0.6
2,389,618	-				+0.9
2,389,618	-				+0.2
2,389,618	-				+0.2
2,389,618	-				+1.1
2,389,618	-				-1.5
2,389,713	-		Echvi_2028	0.14	-1.2
2,389,785	+		Echvi_2028	0.22	+0.8
2,389,838	+		Echvi_2028	0.28	-0.9
2,389,838	+		Echvi_2028	0.28	-1.0
2,389,838	+		Echvi_2028	0.28	-0.3
2,389,838	+		Echvi_2028	0.28	+0.5
2,389,838	+		Echvi_2028	0.28	-0.5
2,389,839	-		Echvi_2028	0.28	+0.7
2,389,843	+		Echvi_2028	0.29	+1.5
2,389,844	-		Echvi_2028	0.29	+0.2
2,389,844	-		Echvi_2028	0.29	+0.1
2,389,951	-		Echvi_2028	0.41	-1.9
2,389,956	-		Echvi_2028	0.41	+1.1
2,389,956	-		Echvi_2028	0.41	-2.5
2,389,987	+		Echvi_2028	0.45	+0.0
2,390,114	+		Echvi_2028	0.59	-1.1
2,390,115	-		Echvi_2028	0.59	+0.7
2,390,115	-		Echvi_2028	0.59	+1.5
2,390,115	-		Echvi_2028	0.59	+0.4
2,390,139	+		Echvi_2028	0.62	-0.3
2,390,159	+		Echvi_2028	0.64	-0.6
2,390,159	+		Echvi_2028	0.64	+0.6
2,390,196	+		Echvi_2028	0.68	+0.3
2,390,197	-		Echvi_2028	0.68	-1.2
2,390,197	-		Echvi_2028	0.68	+0.9
2,390,429	-				+0.5
2,390,443	-				-1.3
2,390,447	-				-1.2