Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2020

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,371,538	+				+2.6
2,371,550	+				+2.9
2,371,908	-				-0.1
2,371,932	+				+0.2
2,371,976	+				+0.5
2,371,976	+				+2.0
2,371,977	-				-0.2
2,375,554	+		Echvi_2020	0.83	-0.5
2,376,274	-				-0.5
2,376,274	-				+0.6
2,376,274	-				-0.1
2,376,274	-				+0.2
2,376,276	-				-1.2
2,376,318	-				+1.8
2,376,318	-				-0.5
2,376,398	+				-0.1
2,376,411	-				-0.9
2,376,423	+				-0.3
2,376,465	+				+0.3
2,376,465	+				-0.3
2,376,466	-				-0.7
2,376,466	-				+0.2
2,376,467	+				+0.3
2,376,467	+				+0.7
2,376,468	-				+0.1
2,376,468	-				+0.5
2,376,468	-				+1.8
2,376,468	-				-0.5
2,376,522	+				-1.0
2,376,523	-				+0.8
2,376,636	-				-2.0
2,376,650	-				+0.8
2,376,658	-				-1.2
2,376,690	-				+0.4
2,376,690	-				+0.3
2,376,691	+				-0.3
2,376,692	-				+0.1
2,376,901	-				+0.4
2,376,928	+				-0.1
2,376,971	+				+0.4
2,376,971	+				-0.8
2,376,972	-				-2.1
2,376,973	+				-0.3
2,376,974	-				+1.1
2,376,974	-				+0.2
2,376,988	+				-0.1
2,376,989	-				+1.5
2,376,989	-				-1.8
2,376,989	-				-0.5
2,376,989	-				-0.5
2,376,990	+				+0.4
2,376,990	+				-0.5
2,377,045	+				-0.7
2,377,113	-		Echvi_2021	0.12	+0.3
2,377,123	+		Echvi_2021	0.12	+1.1
2,377,175	+		Echvi_2021	0.15	+1.5
2,377,175	+		Echvi_2021	0.15	+2.1
2,377,175	+		Echvi_2021	0.15	-0.4
2,377,175	+		Echvi_2021	0.15	+1.0
2,377,176	-		Echvi_2021	0.15	-0.4
2,377,199	+		Echvi_2021	0.16	-0.0
2,377,199	+		Echvi_2021	0.16	-0.5
2,377,199	+		Echvi_2021	0.16	-2.1
2,377,199	+		Echvi_2021	0.16	+1.2
2,377,199	+		Echvi_2021	0.16	+0.9
2,377,199	+		Echvi_2021	0.16	-0.7
2,377,199	+		Echvi_2021	0.16	-0.1
2,377,200	-		Echvi_2021	0.16	-1.4
2,377,200	-		Echvi_2021	0.16	+1.1