Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2006

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,356,794	+		Echvi_2003	0.83	+1.3
2,356,795	-		Echvi_2003	0.83	-0.7
2,356,795	-		Echvi_2003	0.83	-0.6
2,356,821	+		Echvi_2003	0.85	-2.2
2,356,822	-		Echvi_2003	0.85	+0.3
2,356,908	+		Echvi_2003	0.89	+0.4
2,356,936	+				-1.5
2,356,977	+				+0.1
2,356,977	+				-0.9
2,356,978	-				+1.2
2,356,978	-				-0.4
2,356,994	-				-0.2
2,357,085	+				-0.5
2,357,107	+				+0.2
2,357,143	-				-0.4
2,357,143	-				-0.3
2,357,151	+		Echvi_2004	0.12	-0.0
2,357,151	+		Echvi_2004	0.12	-1.4
2,357,152	-		Echvi_2004	0.12	+0.2
2,357,152	-		Echvi_2004	0.12	+0.4
2,357,152	-		Echvi_2004	0.12	+0.1
2,357,284	+		Echvi_2004	0.47	-1.3
2,357,284	+		Echvi_2004	0.47	-1.9
2,357,284	+		Echvi_2004	0.47	-1.6
2,357,284	+		Echvi_2004	0.47	-1.2
2,357,284	+		Echvi_2004	0.47	+0.0
2,357,284	+		Echvi_2004	0.47	-0.7
2,357,284	+		Echvi_2004	0.47	-2.2
2,357,285	-		Echvi_2004	0.48	+0.2
2,357,285	-		Echvi_2004	0.48	-0.8
2,357,285	-		Echvi_2004	0.48	-1.8
2,357,285	-		Echvi_2004	0.48	+0.3
2,357,285	-		Echvi_2004	0.48	+0.2
2,357,285	-		Echvi_2004	0.48	+0.8
2,357,288	+		Echvi_2004	0.49	-0.5
2,357,288	+		Echvi_2004	0.49	-0.9
2,357,357	+		Echvi_2004	0.67	+0.9
2,357,409	+		Echvi_2004	0.81	-1.0
2,357,410	-		Echvi_2004	0.81	+0.7
2,357,471	+				-1.5
2,357,472	-				+0.8
2,357,474	-				-1.4
2,357,474	-				-0.9
2,357,489	+				-2.2
2,357,528	+				-0.7
2,357,592	+		Echvi_2005	0.12	-2.7
2,357,671	+		Echvi_2005	0.76	-0.4
2,357,672	-		Echvi_2005	0.77	+0.4
2,357,681	+		Echvi_2005	0.85	-0.3
2,357,681	+		Echvi_2005	0.85	-0.5
2,357,682	-		Echvi_2005	0.85	-0.8
2,357,682	-		Echvi_2005	0.85	-0.2
2,357,686	-		Echvi_2005	0.89	-0.3
2,357,724	+				+0.7
2,357,786	+				-0.5
2,357,804	+				+0.2
2,357,804	+				+0.6
2,357,907	+		Echvi_2006	0.16	+0.5
2,357,908	-		Echvi_2006	0.16	+0.7
2,357,936	+		Echvi_2006	0.20	+0.4
2,357,963	+		Echvi_2006	0.23	+0.5
2,358,119	+		Echvi_2006	0.44	+1.4
2,358,120	-		Echvi_2006	0.44	+0.8
2,358,124	+		Echvi_2006	0.44	-0.1
2,358,125	-		Echvi_2006	0.44	+0.4
2,358,151	-		Echvi_2006	0.48	-0.8
2,358,153	+		Echvi_2006	0.48	-0.7
2,358,153	+		Echvi_2006	0.48	+0.5
2,358,165	+		Echvi_2006	0.50	+1.0
2,358,166	-		Echvi_2006	0.50	-0.4
2,358,433	+		Echvi_2006	0.85	-0.0
2,358,440	+		Echvi_2006	0.86	+2.2
2,358,440	+		Echvi_2006	0.86	+0.8
2,358,468	-		Echvi_2006	0.89	-0.2
2,358,546	+				-0.5
2,358,551	-				-1.5
2,358,551	-				-0.5
2,358,631	-				-0.6
2,358,631	-				+1.1
2,358,631	-				-2.0
2,358,631	-				+0.8
2,358,632	+				+0.2
2,358,632	+				+0.5
2,358,633	-				+1.4
2,358,633	-				+0.8
2,358,677	+				+1.1
2,358,718	+				+0.2
2,358,724	-				+0.6
2,358,727	+				-1.7
2,358,727	+				-0.6
2,358,728	-				-0.4
2,358,728	-				-0.2
2,358,728	-				+0.4
2,358,764	+		Echvi_2007	0.13	-1.5
2,358,764	+		Echvi_2007	0.13	-0.5
2,358,830	+		Echvi_2007	0.19	-1.3
2,358,830	+		Echvi_2007	0.19	-0.1
2,358,831	-		Echvi_2007	0.20	+0.2
2,358,831	-		Echvi_2007	0.20	-0.9
2,358,842	+		Echvi_2007	0.21	-0.4
2,358,843	-		Echvi_2007	0.21	-0.3
2,358,843	-		Echvi_2007	0.21	-0.3
2,358,873	+		Echvi_2007	0.24	-0.5
2,358,905	-		Echvi_2007	0.27	+0.4
2,358,910	+		Echvi_2007	0.28	+0.5
2,358,910	+		Echvi_2007	0.28	+0.9
2,358,911	-		Echvi_2007	0.28	+0.5
2,358,916	+		Echvi_2007	0.28	-1.2
2,358,917	-		Echvi_2007	0.28	+0.7
2,358,917	-		Echvi_2007	0.28	-1.0
2,358,917	-		Echvi_2007	0.28	+0.3
2,358,918	+		Echvi_2007	0.28	+0.7
2,358,919	-		Echvi_2007	0.29	-1.9
2,358,970	-		Echvi_2007	0.34	-0.9
2,358,987	+		Echvi_2007	0.35	-1.6
2,358,987	+		Echvi_2007	0.35	+1.1
2,359,080	+		Echvi_2007	0.45	+0.5
2,359,081	-		Echvi_2007	0.45	+0.1
2,359,081	-		Echvi_2007	0.45	+1.3
2,359,083	+		Echvi_2007	0.45	-0.9
2,359,084	-		Echvi_2007	0.45	+2.2
2,359,101	+		Echvi_2007	0.47	-0.8
2,359,102	-		Echvi_2007	0.47	+1.0
2,359,102	-		Echvi_2007	0.47	-0.4
2,359,102	-		Echvi_2007	0.47	-3.3
2,359,102	-		Echvi_2007	0.47	+1.1
2,359,102	-		Echvi_2007	0.47	-1.0
2,359,102	-		Echvi_2007	0.47	-0.7
2,359,208	+		Echvi_2007	0.58	-2.1
2,359,230	+		Echvi_2007	0.60	+1.3
2,359,230	+		Echvi_2007	0.60	+3.4
2,359,230	+		Echvi_2007	0.60	-0.2
2,359,231	-		Echvi_2007	0.60	+0.3
2,359,250	-		Echvi_2007	0.62	-1.2
2,359,250	-		Echvi_2007	0.62	+1.2
2,359,289	+		Echvi_2007	0.66	-0.1
2,359,373	-		Echvi_2007	0.75	+0.2
2,359,511	-		Echvi_2007	0.89	+0.2
2,359,511	-		Echvi_2007	0.89	-2.4
2,359,529	+				-0.3
2,359,529	+				-0.6
2,359,530	-				-0.8
2,359,530	-				-0.6
2,359,530	-				-0.7