Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1937

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,279,794	+		Echvi_1936	0.39	-0.3
2,279,794	+		Echvi_1936	0.39	-0.9
2,279,795	-		Echvi_1936	0.39	+1.1
2,279,795	-		Echvi_1936	0.39	-0.9
2,279,800	+		Echvi_1936	0.40	-0.3
2,279,800	+		Echvi_1936	0.40	-0.5
2,279,875	+		Echvi_1936	0.45	+0.1
2,279,875	+		Echvi_1936	0.45	+0.2
2,279,885	+		Echvi_1936	0.45	-1.2
2,279,885	+		Echvi_1936	0.45	-0.6
2,279,885	+		Echvi_1936	0.45	+0.1
2,279,885	+		Echvi_1936	0.45	+0.3
2,279,907	-				-0.2
2,279,915	+		Echvi_1936	0.47	+0.1
2,279,916	-		Echvi_1936	0.47	-0.6
2,279,980	+		Echvi_1936	0.51	-1.5
2,279,980	+		Echvi_1936	0.51	+0.2
2,280,000	-		Echvi_1936	0.53	-0.3
2,280,019	+		Echvi_1936	0.54	+1.8
2,280,069	+		Echvi_1936	0.57	-0.2
2,280,193	+		Echvi_1936	0.65	+0.4
2,280,276	+		Echvi_1936	0.70	+0.4
2,280,276	+		Echvi_1936	0.70	-0.3
2,280,276	+		Echvi_1936	0.70	-0.5
2,280,277	-		Echvi_1936	0.70	-0.1
2,280,280	+		Echvi_1936	0.71	-0.6
2,280,280	+		Echvi_1936	0.71	-1.4
2,280,280	+		Echvi_1936	0.71	+0.7
2,280,313	-		Echvi_1936	0.73	+1.1
2,280,331	+		Echvi_1936	0.74	-0.6
2,280,331	+		Echvi_1936	0.74	-0.8
2,280,350	+		Echvi_1936	0.75	+1.0
2,280,350	+		Echvi_1936	0.75	+1.4
2,280,353	-		Echvi_1936	0.75	-0.7
2,280,368	-		Echvi_1936	0.76	+0.0
2,280,371	+		Echvi_1936	0.76	-1.3
2,280,392	+		Echvi_1936	0.78	+0.1
2,280,392	+		Echvi_1936	0.78	-1.4
2,280,393	-		Echvi_1936	0.78	+1.2
2,280,393	-		Echvi_1936	0.78	+0.6
2,280,393	-		Echvi_1936	0.78	-0.8
2,280,393	-		Echvi_1936	0.78	+1.3
2,280,393	-		Echvi_1936	0.78	-1.9
2,280,393	-		Echvi_1936	0.78	+0.1
2,280,393	-		Echvi_1936	0.78	+1.5
2,280,393	-		Echvi_1936	0.78	-0.3
2,280,397	+		Echvi_1936	0.78	-0.2
2,280,397	+		Echvi_1936	0.78	-1.7
2,280,397	+		Echvi_1936	0.78	+0.2
2,280,397	+		Echvi_1936	0.78	+0.6
2,280,397	+		Echvi_1936	0.78	-0.3
2,280,397	+		Echvi_1936	0.78	-1.0
2,280,398	-		Echvi_1936	0.78	-0.0
2,280,399	+		Echvi_1936	0.78	+0.6
2,280,399	+		Echvi_1936	0.78	-0.0
2,280,399	+		Echvi_1936	0.78	+0.8
2,280,400	-		Echvi_1936	0.78	-2.7
2,280,400	-		Echvi_1936	0.78	+1.3
2,280,423	-		Echvi_1936	0.80	-2.2
2,280,443	+		Echvi_1936	0.81	-0.0
2,280,483	+		Echvi_1936	0.84	-2.2
2,280,484	-		Echvi_1936	0.84	-0.1
2,280,547	+		Echvi_1936	0.88	+0.5
2,280,551	+		Echvi_1936	0.88	+0.2
2,280,551	+		Echvi_1936	0.88	-0.5
2,280,556	+		Echvi_1936	0.88	-0.9
2,280,560	+		Echvi_1936	0.88	-1.2
2,280,608	+				+0.1
2,280,609	-				+2.5
2,280,609	-				+0.2
2,280,609	-				-0.5
2,280,643	+				-0.1
2,280,739	+				-0.3
2,280,763	-				-3.2
2,280,763	-				-2.8
2,280,763	-				-3.0
2,280,803	+				+0.1
2,280,803	+				+0.4
2,280,823	+				-0.6
2,280,823	+				+1.1
2,280,827	+				+0.1
2,280,885	+		Echvi_1937	0.10	+0.4
2,280,922	+		Echvi_1937	0.13	+1.8
2,280,922	+		Echvi_1937	0.13	-0.3
2,280,922	+		Echvi_1937	0.13	+2.1
2,280,924	+		Echvi_1937	0.14	-1.7
2,280,946	-		Echvi_1937	0.16	-2.6
2,280,948	+		Echvi_1937	0.16	-1.1
2,280,959	+		Echvi_1937	0.17	-1.4
2,280,972	-		Echvi_1937	0.18	-0.2
2,280,976	+		Echvi_1937	0.18	-1.7
2,280,977	-		Echvi_1937	0.18	-0.7
2,280,977	-				+1.8
2,280,977	-		Echvi_1937	0.18	+0.0
2,280,977	-		Echvi_1937	0.18	-3.1
2,280,977	-		Echvi_1937	0.18	-2.3
2,280,977	-		Echvi_1937	0.18	+0.2
2,280,995	+		Echvi_1937	0.20	+1.2
2,281,006	-		Echvi_1937	0.21	-0.3
2,281,043	-		Echvi_1937	0.24	-1.8
2,281,045	+		Echvi_1937	0.24	-1.0
2,281,045	+		Echvi_1937	0.24	-0.2
2,281,045	+		Echvi_1937	0.24	-0.7
2,281,045	+		Echvi_1937	0.24	-0.9
2,281,045	+		Echvi_1937	0.24	-0.5
2,281,046	-		Echvi_1937	0.25	-1.8
2,281,046	-		Echvi_1937	0.25	+0.2
2,281,068	-		Echvi_1937	0.27	-0.7
2,281,077	+		Echvi_1937	0.27	-0.2
2,281,077	+		Echvi_1937	0.27	+0.4
2,281,097	-		Echvi_1937	0.29	+0.2
2,281,099	+		Echvi_1937	0.29	-2.7
2,281,111	+		Echvi_1937	0.30	-1.0
2,281,112	-		Echvi_1937	0.30	-2.2
2,281,113	+		Echvi_1937	0.31	-0.8
2,281,113	+		Echvi_1937	0.31	-0.1
2,281,113	+		Echvi_1937	0.31	-2.2
2,281,114	-		Echvi_1937	0.31	-0.8
2,281,150	+		Echvi_1937	0.34	-1.9
2,281,154	-		Echvi_1937	0.34	-0.9
2,281,184	-		Echvi_1937	0.37	-1.3
2,281,224	-		Echvi_1937	0.41	-1.4
2,281,246	-		Echvi_1937	0.42	-2.4
2,281,257	+		Echvi_1937	0.43	-0.8
2,281,258	-		Echvi_1937	0.44	-1.0
2,281,260	+		Echvi_1937	0.44	-0.1
2,281,288	+		Echvi_1937	0.46	-2.1
2,281,292	+		Echvi_1937	0.47	+1.5
2,281,293	-		Echvi_1937	0.47	-1.0
2,281,293	-		Echvi_1937	0.47	-1.4
2,281,293	-		Echvi_1937	0.47	-1.6
2,281,293	-		Echvi_1937	0.47	-2.4
2,281,295	+		Echvi_1937	0.47	-0.8
2,281,295	+		Echvi_1937	0.47	-0.4
2,281,295	+		Echvi_1937	0.47	-0.5
2,281,295	+		Echvi_1937	0.47	+1.8
2,281,341	-		Echvi_1937	0.51	-3.1
2,281,417	+		Echvi_1937	0.58	-0.1
2,281,417	+		Echvi_1937	0.58	+1.1
2,281,417	+		Echvi_1937	0.58	-0.8
2,281,417	+		Echvi_1937	0.58	+0.1
2,281,480	+		Echvi_1937	0.64	+0.2
2,281,584	-		Echvi_1937	0.73	-0.7
2,281,600	+		Echvi_1937	0.74	-0.2
2,281,600	+		Echvi_1937	0.74	-0.3
2,281,600	+		Echvi_1937	0.74	+0.9
2,281,600	+		Echvi_1937	0.74	-0.1
2,281,600	+		Echvi_1937	0.74	-2.0
2,281,600	+		Echvi_1937	0.74	+1.2
2,281,600	+		Echvi_1937	0.74	+0.1
2,281,601	-		Echvi_1937	0.74	-1.9
2,281,601	-		Echvi_1937	0.74	-0.8
2,281,601	-		Echvi_1937	0.74	-2.8
2,281,601	-		Echvi_1937	0.74	-0.8
2,281,601	-		Echvi_1937	0.74	-1.5
2,281,601	-		Echvi_1937	0.74	-2.2
2,281,601	-		Echvi_1937	0.74	-2.4
2,281,601	-		Echvi_1937	0.74	-3.0
2,281,601	-		Echvi_1937	0.74	-1.2
2,281,611	-		Echvi_1937	0.75	-3.1
2,281,611	-		Echvi_1937	0.75	+1.2
2,281,615	+		Echvi_1937	0.76	-4.1
2,281,615	+		Echvi_1937	0.76	+0.5
2,281,681	-		Echvi_1937	0.82	-1.0
2,281,681	-		Echvi_1937	0.82	-1.7
2,281,691	-		Echvi_1937	0.82	+0.0
2,281,733	-		Echvi_1937	0.86	-0.5
2,281,736	-		Echvi_1937	0.87	-3.1
2,281,742	-		Echvi_1937	0.87	+0.3
2,281,744	+		Echvi_1937	0.87	-0.2
2,281,749	-		Echvi_1937	0.88	-0.4
2,281,749	-		Echvi_1937	0.88	+0.8
2,281,764	+		Echvi_1937	0.89	-2.4
2,281,764	+		Echvi_1937	0.89	-0.8
2,281,824	+				-0.4
2,281,837	+				-1.7
2,282,044	+				-0.7
2,282,045	-				-1.0
2,282,051	+				-0.4
2,282,058	+				+0.6
2,282,065	+				-0.7
2,282,068	+				-0.1
2,282,075	+				-1.5
2,282,076	-				+1.8
2,282,095	+				-0.4
2,282,095	+				+1.5
2,282,108	+				-1.9
2,282,108	+				+1.3
2,282,109	-				+0.1
2,282,192	+				-1.1
2,282,404	+		Echvi_1938	0.22	+0.6
2,282,406	+		Echvi_1938	0.22	+0.2
2,282,407	-		Echvi_1938	0.23	-0.5
2,282,407	-		Echvi_1938	0.23	+1.3
2,282,407	-		Echvi_1938	0.23	-0.8
2,282,407	-		Echvi_1938	0.23	+0.5
2,282,488	-		Echvi_1938	0.33	-0.4
2,282,488	-		Echvi_1938	0.33	-1.1
2,282,569	-		Echvi_1938	0.44	-0.9
2,282,569	-		Echvi_1938	0.44	-1.6
2,282,580	+		Echvi_1938	0.45	+1.8
2,282,580	+		Echvi_1938	0.45	+0.5
2,282,646	+		Echvi_1938	0.54	+0.7
2,282,646	+		Echvi_1938	0.54	+0.8
2,282,647	-		Echvi_1938	0.54	-0.3
2,282,677	+		Echvi_1938	0.58	-2.0
2,282,678	-		Echvi_1938	0.58	-0.5
2,282,678	-		Echvi_1938	0.58	-1.4
2,282,679	+		Echvi_1938	0.58	-0.5
2,282,739	+		Echvi_1938	0.66	-0.4
2,282,740	-		Echvi_1938	0.66	+1.9
2,282,776	+		Echvi_1938	0.71	+1.1