Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1908

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,239,876	+		Echvi_1907	0.46	+1.1
2,239,918	+		Echvi_1907	0.49	+1.2
2,239,987	+		Echvi_1907	0.54	+2.6
2,239,988	-		Echvi_1907	0.54	-0.8
2,239,988	-		Echvi_1907	0.54	+0.2
2,240,099	+		Echvi_1907	0.62	-1.5
2,240,099	+		Echvi_1907	0.62	-0.2
2,240,099	+		Echvi_1907	0.62	-1.0
2,240,100	-		Echvi_1907	0.62	+1.8
2,240,165	+		Echvi_1907	0.67	+0.2
2,240,166	-		Echvi_1907	0.67	+1.1
2,240,166	-		Echvi_1907	0.67	+0.3
2,240,260	+		Echvi_1907	0.74	-0.1
2,240,260	+		Echvi_1907	0.74	-1.6
2,240,261	-		Echvi_1907	0.74	+0.5
2,240,294	+		Echvi_1907	0.77	+0.0
2,240,319	-		Echvi_1907	0.79	+0.2
2,240,319	-		Echvi_1907	0.79	+0.6
2,240,319	-		Echvi_1907	0.79	-0.1
2,240,319	-		Echvi_1907	0.79	+0.9
2,240,374	-		Echvi_1907	0.83	+0.2
2,240,380	+		Echvi_1907	0.83	-0.5
2,240,380	+		Echvi_1907	0.83	+0.4
2,240,380	+		Echvi_1907	0.83	-0.3
2,240,381	-		Echvi_1907	0.83	-1.2
2,240,381	-		Echvi_1907	0.83	+3.0
2,240,381	-		Echvi_1907	0.83	+0.0
2,240,413	+		Echvi_1907	0.86	+0.8
2,240,414	-		Echvi_1907	0.86	-0.1
2,240,414	-		Echvi_1907	0.86	-1.2
2,240,483	+				+0.4
2,240,483	+				+0.5
2,240,483	+				-2.0
2,240,483	+				-0.0
2,240,483	+				+0.4
2,240,483	+				-0.3
2,240,483	+				-0.6
2,240,484	-				+0.2
2,240,484	-				+2.4
2,240,484	-				+0.8
2,240,484	-				-0.1
2,240,484	-				+0.1
2,240,484	-				+0.5
2,240,484	-				-0.3
2,240,484	-				+0.7
2,240,484	-				+0.4
2,240,484	-				+1.1
2,240,484	-				+1.2
2,240,484	-				+0.7
2,240,487	+				+0.2
2,240,488	-				-1.2
2,240,488	-				+1.4
2,240,521	-				+0.8
2,240,521	-				+0.5
2,240,531	-				+0.5
2,240,531	-				-1.2
2,240,539	+				+0.1
2,240,540	-				+0.6
2,240,637	+				-0.3
2,240,638	-				-0.2
2,240,638	-				+0.6
2,240,638	-				-1.6
2,240,638	-				-0.5
2,240,639	+				+0.8
2,240,639	+				+1.5
2,240,639	+				+1.8
2,240,639	+				-0.8
2,240,639	+				+0.7
2,240,640	-				-0.3
2,240,645	-				-0.1
2,240,711	-				-4.1
2,240,855	+				-1.6
2,240,855	+				+0.0
2,240,856	-				+0.0
2,240,859	+				+0.1
2,240,859	+				-0.8
2,240,971	+		Echvi_1908	0.15	-0.6
2,240,972	-		Echvi_1908	0.15	+0.1
2,240,972	-		Echvi_1908	0.15	+0.2
2,240,972	-		Echvi_1908	0.15	+0.0
2,240,975	+		Echvi_1908	0.16	+0.1
2,240,976	-		Echvi_1908	0.16	-1.8
2,241,059	+		Echvi_1908	0.29	+0.1
2,241,126	-		Echvi_1908	0.39	-0.9
2,241,143	+		Echvi_1908	0.41	-0.5
2,241,143	+		Echvi_1908	0.41	-0.0
2,241,144	-		Echvi_1908	0.41	+0.1
2,241,160	-		Echvi_1908	0.44	-0.5
2,241,222	+		Echvi_1908	0.53	+0.2
2,241,223	-		Echvi_1908	0.53	-0.5
2,241,302	+		Echvi_1908	0.65	-0.6
2,241,302	+		Echvi_1908	0.65	+0.6
2,241,302	+		Echvi_1908	0.65	-1.1
2,241,303	-		Echvi_1908	0.65	+0.4
2,241,306	+		Echvi_1908	0.66	+0.2
2,241,307	-		Echvi_1908	0.66	-0.7
2,241,332	+		Echvi_1908	0.70	+1.5
2,241,333	-		Echvi_1908	0.70	-0.4
2,241,386	+		Echvi_1908	0.78	+0.4
2,241,400	-		Echvi_1908	0.80	-0.7
2,241,436	+		Echvi_1908	0.85	-0.4
2,241,436	+		Echvi_1908	0.85	-0.2
2,241,436	+		Echvi_1908	0.85	-1.5
2,241,437	-		Echvi_1908	0.85	-0.3
2,241,437	-		Echvi_1908	0.85	-0.5
2,241,437	-		Echvi_1908	0.85	-0.2
2,241,437	-		Echvi_1908	0.85	-0.3
2,241,437	-		Echvi_1908	0.85	-0.4
2,241,438	+		Echvi_1908	0.85	-0.5
2,241,439	-		Echvi_1908	0.86	-0.2
2,241,469	+				-0.1
2,241,470	-				-0.9
2,241,470	-				-0.8
2,241,489	-				+1.2
2,241,490	+				+0.9
2,241,491	-				-0.8
2,241,491	-				-1.3
2,241,620	+				-0.4
2,241,649	-				-1.1
2,241,738	-				-1.3
2,241,738	-				+0.1
2,241,766	+				+0.3
2,241,766	+				+0.4
2,241,767	-				-0.4
2,241,767	-				+0.2
2,241,821	+		Echvi_1909	0.11	+0.1
2,241,822	-		Echvi_1909	0.11	+1.1
2,241,855	+		Echvi_1909	0.16	+0.2
2,241,897	+		Echvi_1909	0.22	-0.9
2,241,897	+		Echvi_1909	0.22	-0.7
2,241,897	+		Echvi_1909	0.22	-1.4
2,241,898	-		Echvi_1909	0.22	+0.5
2,241,898	-		Echvi_1909	0.22	+0.2
2,241,907	+		Echvi_1909	0.24	-1.0
2,241,907	+		Echvi_1909	0.24	-0.1
2,242,059	+		Echvi_1909	0.47	-0.7
2,242,059	+		Echvi_1909	0.47	+0.7
2,242,060	-		Echvi_1909	0.47	-1.8
2,242,112	+		Echvi_1909	0.55	-0.8
2,242,112	+		Echvi_1909	0.55	+0.7
2,242,112	+		Echvi_1909	0.55	-0.9
2,242,112	+		Echvi_1909	0.55	-0.2
2,242,113	-		Echvi_1909	0.55	-1.1
2,242,113	-		Echvi_1909	0.55	-0.6
2,242,186	-		Echvi_1909	0.66	-1.0
2,242,186	-		Echvi_1909	0.66	+0.3
2,242,186	-		Echvi_1909	0.66	-0.6
2,242,190	-		Echvi_1909	0.67	+0.9
2,242,211	+		Echvi_1909	0.70	-0.8
2,242,245	-		Echvi_1909	0.75	+0.9
2,242,245	-		Echvi_1909	0.75	-0.8
2,242,380	-				-0.9
2,242,407	+				-0.3