Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1846

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,160,964	+		Echvi_1845	0.24	-0.3
2,160,964	+		Echvi_1845	0.24	+0.0
2,160,965	-		Echvi_1845	0.24	-1.2
2,160,965	-		Echvi_1845	0.24	-2.5
2,160,976	+		Echvi_1845	0.25	-0.4
2,160,977	-		Echvi_1845	0.25	-1.1
2,160,988	+		Echvi_1845	0.26	-0.1
2,160,990	+		Echvi_1845	0.26	+0.4
2,160,990	+		Echvi_1845	0.26	+1.2
2,160,991	-		Echvi_1845	0.26	+0.2
2,161,065	+		Echvi_1845	0.32	+0.3
2,161,165	+		Echvi_1845	0.40	-0.1
2,161,165	+		Echvi_1845	0.40	-1.2
2,161,166	-		Echvi_1845	0.40	-2.0
2,161,166	-		Echvi_1845	0.40	-2.4
2,161,166	-		Echvi_1845	0.40	-0.6
2,161,200	-		Echvi_1845	0.43	-1.2
2,161,210	+		Echvi_1845	0.44	+0.2
2,161,218	+		Echvi_1845	0.45	+0.5
2,161,218	+		Echvi_1845	0.45	+0.3
2,161,218	+		Echvi_1845	0.45	+0.3
2,161,218	+		Echvi_1845	0.45	+1.1
2,161,219	-		Echvi_1845	0.45	+0.4
2,161,219	-		Echvi_1845	0.45	-1.7
2,161,219	-		Echvi_1845	0.45	-1.4
2,161,369	+		Echvi_1845	0.57	-0.6
2,161,370	-		Echvi_1845	0.57	-1.3
2,161,370	-		Echvi_1845	0.57	-0.7
2,161,373	-		Echvi_1845	0.57	-1.8
2,161,420	-		Echvi_1845	0.61	-0.8
2,161,420	-		Echvi_1845	0.61	+0.4
2,161,544	-		Echvi_1845	0.71	-1.8
2,161,651	+		Echvi_1845	0.80	+1.2
2,161,654	-		Echvi_1845	0.80	-0.6
2,161,717	+		Echvi_1845	0.85	-0.1
2,161,771	+		Echvi_1845	0.90	+1.5
2,161,774	-		Echvi_1845	0.90	-0.6
2,161,786	-				-2.6
2,161,901	-				-2.4
2,161,924	-				-1.0
2,161,924	-				-0.9
2,161,965	+				-0.8
2,162,022	+				+0.8
2,162,023	-				-1.1
2,162,050	+		Echvi_1846	0.13	+0.2
2,162,050	+		Echvi_1846	0.13	+0.0
2,162,051	-		Echvi_1846	0.13	-2.5
2,162,051	-		Echvi_1846	0.13	+1.8
2,162,051	-		Echvi_1846	0.13	+1.4
2,162,075	+		Echvi_1846	0.16	+0.3
2,162,075	+		Echvi_1846	0.16	+0.7
2,162,075	+		Echvi_1846	0.16	+1.2
2,162,076	-		Echvi_1846	0.16	-2.1
2,162,076	-		Echvi_1846	0.16	-0.5
2,162,092	+		Echvi_1846	0.18	+0.4
2,162,095	-		Echvi_1846	0.18	+1.8
2,162,104	-		Echvi_1846	0.19	-2.9
2,162,152	+		Echvi_1846	0.25	+1.8
2,162,152	+		Echvi_1846	0.25	+1.2
2,162,161	+		Echvi_1846	0.26	+2.2
2,162,162	-		Echvi_1846	0.26	+0.2
2,162,162	-		Echvi_1846	0.26	-1.3
2,162,209	-		Echvi_1846	0.32	+0.8
2,162,319	+		Echvi_1846	0.45	-0.7
2,162,352	-		Echvi_1846	0.49	-2.1
2,162,352	-		Echvi_1846	0.49	-1.7
2,162,352	-		Echvi_1846	0.49	-0.7
2,162,430	-		Echvi_1846	0.59	-1.8
2,162,430	-		Echvi_1846	0.59	-2.3
2,162,445	+		Echvi_1846	0.60	-0.0
2,162,445	+		Echvi_1846	0.60	-1.1
2,162,445	+		Echvi_1846	0.60	+0.8
2,162,446	-		Echvi_1846	0.60	-2.2
2,162,446	-		Echvi_1846	0.60	-0.2
2,162,515	+		Echvi_1846	0.69	+2.0
2,162,524	+		Echvi_1846	0.70	+0.9
2,162,524	+		Echvi_1846	0.70	+0.4
2,162,524	+		Echvi_1846	0.70	+1.5
2,162,524	+		Echvi_1846	0.70	+0.9
2,162,525	-		Echvi_1846	0.70	-2.3
2,162,525	-		Echvi_1846	0.70	-2.7
2,162,529	+		Echvi_1846	0.70	+3.0
2,162,530	-		Echvi_1846	0.71	-1.8
2,162,581	+		Echvi_1846	0.77	+0.1
2,162,581	+		Echvi_1846	0.77	+0.0
2,162,582	-		Echvi_1846	0.77	-1.9
2,162,582	-		Echvi_1846	0.77	-1.7
2,162,582	-		Echvi_1846	0.77	-1.2
2,162,582	-		Echvi_1846	0.77	-0.0
2,162,584	+		Echvi_1846	0.77	+0.3
2,162,584	+		Echvi_1846	0.77	+0.9
2,162,593	+		Echvi_1846	0.78	+0.3
2,162,594	-		Echvi_1846	0.78	-1.8
2,162,598	+		Echvi_1846	0.79	+1.0
2,162,599	-		Echvi_1846	0.79	-1.6
2,162,599	-		Echvi_1846	0.79	-1.9
2,162,645	+		Echvi_1846	0.84	+2.6
2,162,646	-		Echvi_1846	0.84	-1.1
2,162,646	-		Echvi_1846	0.84	-0.6
2,162,646	-		Echvi_1846	0.84	-2.0
2,162,689	-		Echvi_1846	0.90	-2.1
2,162,695	+				-0.5
2,162,696	-				+0.8
2,162,697	+				-0.2
2,162,697	+				+0.2
2,162,697	+				+0.6
2,162,698	-				-2.1
2,162,763	-				-1.8
2,162,788	+				-2.3
2,162,789	-				-0.6
2,162,792	-				-1.2
2,162,798	+				+1.0
2,162,800	+				+0.8
2,162,810	-				-2.6
2,162,825	+				-0.3
2,162,825	+				-1.5
2,162,851	+				+0.3
2,162,851	+				-1.5
2,162,851	+				+0.8
2,162,852	-				-4.4
2,162,852	-				-1.3
2,162,853	+				-1.3
2,162,872	+				-1.1
2,162,907	+				+1.8
2,162,929	-				-1.4
2,162,948	-				-1.9
2,163,038	+		Echvi_1847	0.14	-0.6
2,163,038	+		Echvi_1847	0.14	-2.3
2,163,039	-		Echvi_1847	0.14	-0.6
2,163,083	-		Echvi_1847	0.16	-1.2
2,163,083	-		Echvi_1847	0.16	-2.0
2,163,092	+		Echvi_1847	0.17	+0.7
2,163,093	-		Echvi_1847	0.17	-2.2
2,163,093	-		Echvi_1847	0.17	-1.5
2,163,093	-		Echvi_1847	0.17	-0.7
2,163,096	+		Echvi_1847	0.17	-0.6
2,163,096	+		Echvi_1847	0.17	-0.9
2,163,097	-		Echvi_1847	0.17	-1.2
2,163,113	-		Echvi_1847	0.18	+2.8
2,163,204	+		Echvi_1847	0.23	-1.6
2,163,241	+		Echvi_1847	0.26	+0.8
2,163,242	-		Echvi_1847	0.26	-1.5
2,163,242	-		Echvi_1847	0.26	-0.7
2,163,267	-		Echvi_1847	0.27	-1.9
2,163,335	-		Echvi_1847	0.31	-2.4
2,163,372	+		Echvi_1847	0.33	-1.7
2,163,373	-		Echvi_1847	0.34	+0.4
2,163,373	-		Echvi_1847	0.34	-0.5
2,163,482	-		Echvi_1847	0.40	-3.1
2,163,482	-		Echvi_1847	0.40	+1.8
2,163,482	-		Echvi_1847	0.40	-1.3
2,163,513	-		Echvi_1847	0.42	-1.6
2,163,513	-		Echvi_1847	0.42	+0.1
2,163,533	-		Echvi_1847	0.43	-0.2
2,163,564	+		Echvi_1847	0.45	-1.9
2,163,588	+		Echvi_1847	0.46	-1.9
2,163,588	+		Echvi_1847	0.46	+2.8
2,163,589	-		Echvi_1847	0.46	-2.3
2,163,589	-		Echvi_1847	0.46	-2.9
2,163,598	-		Echvi_1847	0.47	-0.8
2,163,603	-		Echvi_1847	0.47	-2.9
2,163,603	-		Echvi_1847	0.47	-0.7
2,163,671	+		Echvi_1847	0.51	-0.2
2,163,673	+		Echvi_1847	0.51	-1.1
2,163,673	+		Echvi_1847	0.51	-0.5
2,163,688	-		Echvi_1847	0.52	+0.1
2,163,709	+		Echvi_1847	0.54	-1.3
2,163,723	+		Echvi_1847	0.54	-0.0
2,163,724	-		Echvi_1847	0.54	-1.8
2,163,724	-		Echvi_1847	0.54	-1.8
2,163,745	+		Echvi_1847	0.56	+0.8
2,163,746	-		Echvi_1847	0.56	-0.2
2,163,769	+		Echvi_1847	0.57	+0.1
2,163,769	+		Echvi_1847	0.57	-1.5
2,163,769	+		Echvi_1847	0.57	-0.6