Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1761

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,071,509	-		Echvi_1758	0.62	-1.2
2,071,617	+				+0.7
2,071,622	-				+1.1
2,071,661	+				+0.4
2,071,661	+				+1.3
2,071,661	+				-0.9
2,071,662	-				-1.9
2,071,662	-				-0.6
2,071,665	-				-3.6
2,071,808	+		Echvi_1759	0.32	+1.3
2,071,864	-		Echvi_1759	0.42	-2.2
2,071,864	-		Echvi_1759	0.42	-2.6
2,071,864	-		Echvi_1759	0.42	-2.7
2,071,883	+		Echvi_1759	0.46	-1.9
2,071,884	-		Echvi_1759	0.46	-2.0
2,071,887	-		Echvi_1759	0.47	-0.3
2,071,893	+		Echvi_1759	0.48	+0.5
2,071,894	-				+1.7
2,071,894	-		Echvi_1759	0.48	-1.7
2,071,894	-		Echvi_1759	0.48	-0.4
2,071,894	-		Echvi_1759	0.48	-1.0
2,071,899	+		Echvi_1759	0.49	+2.7
2,071,899	+		Echvi_1759	0.49	+0.2
2,071,899	+		Echvi_1759	0.49	+0.4
2,071,943	+		Echvi_1759	0.57	-0.3
2,072,015	+		Echvi_1759	0.71	+0.4
2,072,015	+		Echvi_1759	0.71	-1.1
2,072,015	+		Echvi_1759	0.71	-0.7
2,072,082	+		Echvi_1759	0.83	+0.8
2,072,106	+		Echvi_1759	0.88	+0.4
2,072,123	+				-0.2
2,072,127	+				-0.5
2,072,150	+				-0.1
2,072,151	-				-1.7
2,072,151	-				-1.4
2,072,151	-				-2.0
2,072,151	-				-0.9
2,072,264	+		Echvi_1760	0.28	+1.0
2,072,265	-		Echvi_1760	0.28	-2.0
2,072,269	-		Echvi_1760	0.29	-1.3
2,072,321	+		Echvi_1760	0.45	+4.3
2,072,323	+		Echvi_1760	0.46	-1.1
2,072,324	-		Echvi_1760	0.46	-1.0
2,072,324	-		Echvi_1760	0.46	-1.5
2,072,366	+		Echvi_1760	0.60	+0.7
2,072,366	+		Echvi_1760	0.60	+2.7
2,072,367	-		Echvi_1760	0.60	-2.2
2,072,380	+		Echvi_1760	0.64	+0.9
2,072,380	+		Echvi_1760	0.64	-0.6
2,072,382	+		Echvi_1760	0.64	+0.3
2,072,389	+		Echvi_1760	0.67	+3.1
2,072,389	+		Echvi_1760	0.67	+2.1
2,072,390	-		Echvi_1760	0.67	-2.3
2,072,456	-		Echvi_1760	0.88	-1.1
2,072,490	-				-0.2
2,072,585	-				-2.7
2,072,621	+		Echvi_1761	0.12	+0.1
2,072,622	-		Echvi_1761	0.12	-0.4
2,072,631	+		Echvi_1761	0.13	-0.0
2,072,631	+		Echvi_1761	0.13	-0.6
2,072,631	+		Echvi_1761	0.13	-2.7
2,072,631	+		Echvi_1761	0.13	-2.6
2,072,632	-		Echvi_1761	0.13	-1.4
2,072,632	-		Echvi_1761	0.13	-1.0
2,072,667	+		Echvi_1761	0.17	-0.6
2,072,682	+		Echvi_1761	0.18	-2.3
2,072,682	+		Echvi_1761	0.18	-2.1
2,072,682	+		Echvi_1761	0.18	-1.9
2,072,682	+		Echvi_1761	0.18	-1.8
2,072,683	-		Echvi_1761	0.18	-0.9
2,072,683	-		Echvi_1761	0.18	-2.9
2,072,713	+				+1.7
2,072,713	+		Echvi_1761	0.21	-0.5
2,072,713	+		Echvi_1761	0.21	-1.3
2,072,714	-		Echvi_1761	0.22	-1.5
2,072,773	+		Echvi_1761	0.28	-1.9
2,072,773	+		Echvi_1761	0.28	-3.2
2,072,814	-		Echvi_1761	0.32	-1.0
2,072,814	-		Echvi_1761	0.32	-1.7
2,072,814	-		Echvi_1761	0.32	-2.4
2,072,817	+		Echvi_1761	0.32	-1.4
2,072,835	+		Echvi_1761	0.34	-0.9
2,072,836	-		Echvi_1761	0.34	-2.4
2,072,888	-		Echvi_1761	0.39	-3.2
2,072,916	-		Echvi_1761	0.42	-0.6
2,073,041	+		Echvi_1761	0.55	-0.7
2,073,094	+		Echvi_1761	0.61	+0.9
2,073,094	+		Echvi_1761	0.61	-0.6
2,073,094	+		Echvi_1761	0.61	+0.4
2,073,114	+		Echvi_1761	0.63	+0.3
2,073,114	+		Echvi_1761	0.63	-0.8
2,073,114	+		Echvi_1761	0.63	+0.6
2,073,128	-		Echvi_1761	0.64	-0.3
2,073,128	-		Echvi_1761	0.64	-0.9
2,073,128	-		Echvi_1761	0.64	-2.3
2,073,154	+		Echvi_1761	0.67	-0.2
2,073,155	-		Echvi_1761	0.67	-2.3
2,073,215	+		Echvi_1761	0.73	+0.3
2,073,239	+		Echvi_1761	0.76	+0.0
2,073,287	-		Echvi_1761	0.80	-1.0
2,073,295	-		Echvi_1761	0.81	+0.1
2,073,384	-				-0.0
2,073,417	+				-0.1
2,073,417	+				+0.3
2,073,417	+				+0.6
2,073,419	+				-0.1
2,073,420	-				+0.3
2,073,420	-				-0.9
2,073,420	-				-0.5
2,073,420	-				+1.7
2,073,420	-				+1.1
2,073,422	+				-1.3
2,073,423	-				-1.1
2,073,423	-				-0.6
2,073,457	+				+0.9
2,073,458	-				-0.2
2,073,458	-				-0.7
2,073,460	+				+1.7
2,073,461	-				-1.5
2,073,461	-				-0.3
2,073,461	-				-0.6
2,073,461	-				+0.3
2,073,462	+				+1.1
2,073,462	+				+1.1
2,074,098	+				-1.1
2,074,105	+				-0.0
2,074,105	+				+2.7
2,074,105	+				+0.1
2,074,106	-				+0.2
2,074,195	-		Echvi_1763	0.40	-0.1
2,074,195	-		Echvi_1763	0.40	-1.7
2,074,209	+		Echvi_1763	0.46	+0.7
2,074,209	+		Echvi_1763	0.46	-1.9
2,074,210	-		Echvi_1763	0.47	+0.6
2,074,210	-		Echvi_1763	0.47	+0.2
2,074,227	+		Echvi_1763	0.53	-1.4
2,074,228	-		Echvi_1763	0.54	+0.6
2,074,229	+		Echvi_1763	0.54	-0.4
2,074,230	-		Echvi_1763	0.55	-0.6
2,074,240	+		Echvi_1763	0.59	-1.8
2,074,240	+		Echvi_1763	0.59	+0.1
2,074,240	+		Echvi_1763	0.59	-0.7
2,074,241	-		Echvi_1763	0.59	+0.1
2,074,241	-		Echvi_1763	0.59	-0.7
2,074,241	-		Echvi_1763	0.59	-0.3
2,074,241	-		Echvi_1763	0.59	-0.7
2,074,248	+		Echvi_1763	0.62	-0.9
2,074,248	+		Echvi_1763	0.62	+0.1
2,074,249	-		Echvi_1763	0.63	+1.5
2,074,251	+		Echvi_1763	0.63	+0.5
2,074,252	-		Echvi_1763	0.64	+0.7
2,074,252	-		Echvi_1763	0.64	+1.9
2,074,283	-		Echvi_1763	0.77	+0.8
2,074,303	+		Echvi_1763	0.85	+0.5
2,074,345	-				-1.1
2,074,354	-				+0.8
2,074,381	-				+2.2
2,074,397	-				-0.0