Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1707

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,009,999	+		Echvi_1706	0.67	-0.9
2,010,000	-		Echvi_1706	0.67	+1.0
2,010,008	+		Echvi_1706	0.67	-0.9
2,010,008	+		Echvi_1706	0.67	+1.0
2,010,008	+		Echvi_1706	0.67	-1.3
2,010,009	-		Echvi_1706	0.67	+1.1
2,010,009	-		Echvi_1706	0.67	-1.9
2,010,146	-		Echvi_1706	0.72	-0.6
2,010,167	+		Echvi_1706	0.72	-1.3
2,010,274	+		Echvi_1706	0.76	-2.2
2,010,717	-				-0.4
2,010,717	-				-2.9
2,010,717	-				-2.6
2,010,717	-				-3.1
2,010,838	-				-1.1
2,010,968	+				-0.4
2,010,970	+				+1.7
2,010,970	+				-1.4
2,010,970	+				-0.3
2,010,971	-				-1.0
2,010,971	-				-2.3
2,010,971	-				+0.7
2,010,971	-				-1.4
2,010,992	-				-1.2
2,011,002	+				+1.7
2,011,002	+				-0.6
2,011,003	-				+0.1
2,011,003	-				-2.4
2,011,003	-				+0.3
2,011,003	-				+0.9
2,011,003	-				-0.7
2,011,003	-				-0.5
2,011,347	+		Echvi_1707	0.28	-2.0
2,011,379	+		Echvi_1707	0.31	-1.0
2,011,379	+		Echvi_1707	0.31	-1.6
2,011,379	+		Echvi_1707	0.31	+2.1
2,011,380	-		Echvi_1707	0.31	+4.0
2,011,380	-		Echvi_1707	0.31	-1.6
2,011,380	-		Echvi_1707	0.31	-0.4
2,011,435	+		Echvi_1707	0.35	-0.8
2,011,676	-		Echvi_1707	0.55	-1.3
2,011,790	+		Echvi_1707	0.64	-1.3
2,011,900	+		Echvi_1707	0.73	+0.1
2,011,910	-		Echvi_1707	0.74	-2.3
2,012,033	+		Echvi_1707	0.84	+0.9
2,012,033	+		Echvi_1707	0.84	-2.4
2,012,033	+		Echvi_1707	0.84	+0.1
2,012,035	+		Echvi_1707	0.84	-0.5
2,012,169	-				-1.2
2,012,169	-				-0.4
2,012,169	-				+0.6
2,012,194	-				-0.4
2,012,318	+				+0.1
2,012,319	-				-0.0
2,012,319	-				+1.2
2,012,319	-				+0.4
2,012,355	+				-0.4
2,012,355	+				+0.1
2,012,356	-				+0.6
2,012,356	-				-0.3
2,012,357	+				-1.1
2,012,357	+				+0.4
2,012,401	-				-0.2
2,012,409	+				+0.5
2,012,409	+				+0.5
2,012,410	-				-1.2
2,012,410	-				-0.5
2,012,410	-				+0.1
2,012,479	+				-1.1
2,012,479	+				-1.5
2,012,490	-				+0.8
2,012,490	-				+0.1
2,012,526	-				+0.2
2,012,611	+		Echvi_1708	0.14	+1.6
2,012,627	+		Echvi_1708	0.17	-0.8
2,012,627	+		Echvi_1708	0.17	+0.2
2,012,638	+		Echvi_1708	0.19	+0.0
2,012,704	+		Echvi_1708	0.32	+0.4
2,012,704	+		Echvi_1708	0.32	-0.4
2,012,705	-		Echvi_1708	0.32	-0.4
2,012,792	+		Echvi_1708	0.48	-0.4
2,012,792	+		Echvi_1708	0.48	+0.3
2,012,793	-		Echvi_1708	0.48	-0.3
2,012,793	-		Echvi_1708	0.48	+0.8
2,012,949	+		Echvi_1708	0.76	-0.3
2,012,952	+		Echvi_1708	0.77	+0.4
2,012,977	+		Echvi_1708	0.82	-0.9
2,012,991	+		Echvi_1708	0.84	-0.3
2,012,992	-		Echvi_1708	0.84	-1.2
2,012,992	-		Echvi_1708	0.84	+1.1
2,013,079	+				-1.4
2,013,081	+				+0.1
2,013,113	+				-0.7
2,013,143	+				-0.2
2,013,143	+				-0.3
2,013,190	+				-0.3
2,013,190	+				+0.6
2,013,190	+				-0.3
2,013,191	-				+0.5
2,013,191	-				+0.1
2,013,191	-				-1.2
2,013,191	-				+0.9