Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1704

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,005,225	+		Echvi_1703	0.63	-0.8
2,005,225	+		Echvi_1703	0.63	-1.2
2,005,226	-		Echvi_1703	0.63	-0.1
2,005,227	+		Echvi_1703	0.63	-0.2
2,005,228	-		Echvi_1703	0.64	+0.4
2,005,228	-		Echvi_1703	0.64	-0.7
2,005,228	-		Echvi_1703	0.64	-0.8
2,005,228	-		Echvi_1703	0.64	-0.5
2,005,229	+		Echvi_1703	0.64	-0.7
2,005,230	-		Echvi_1703	0.64	+1.4
2,005,288	+		Echvi_1703	0.66	+0.8
2,005,288	+		Echvi_1703	0.66	+0.5
2,005,288	+		Echvi_1703	0.66	-0.0
2,005,288	+		Echvi_1703	0.66	-1.5
2,005,288	+		Echvi_1703	0.66	-0.4
2,005,289	-		Echvi_1703	0.67	-1.5
2,005,289	-		Echvi_1703	0.67	-1.7
2,005,294	+		Echvi_1703	0.67	+1.1
2,005,296	+		Echvi_1703	0.67	-1.0
2,005,296	+		Echvi_1703	0.67	+0.7
2,005,296	+		Echvi_1703	0.67	-0.8
2,005,296	+		Echvi_1703	0.67	-0.8
2,005,297	-		Echvi_1703	0.67	-1.8
2,005,297	-		Echvi_1703	0.67	-0.0
2,005,297	-		Echvi_1703	0.67	-0.5
2,005,297	-		Echvi_1703	0.67	+1.7
2,005,319	-		Echvi_1703	0.68	-0.3
2,005,319	-		Echvi_1703	0.68	-0.3
2,005,331	-		Echvi_1703	0.69	+0.6
2,005,331	-		Echvi_1703	0.69	-3.1
2,005,341	+		Echvi_1703	0.69	-1.4
2,005,399	+		Echvi_1703	0.72	-0.8
2,005,453	+		Echvi_1703	0.75	+0.2
2,005,454	-		Echvi_1703	0.75	-0.6
2,005,547	-		Echvi_1703	0.79	-0.5
2,005,547	-		Echvi_1703	0.79	-0.5
2,005,550	+		Echvi_1703	0.79	+1.1
2,005,550	+		Echvi_1703	0.79	-0.2
2,005,615	+		Echvi_1703	0.82	+0.7
2,005,615	+		Echvi_1703	0.82	+0.5
2,005,616	-		Echvi_1703	0.83	-0.3
2,005,816	+				+0.4
2,005,816	+				-0.5
2,005,816	+				-0.3
2,005,816	+				+0.9
2,005,817	-				-1.3
2,005,819	+				-1.7
2,005,819	+				-1.3
2,005,890	+				+0.2
2,005,907	-				-0.9
2,005,909	+				-0.1
2,005,910	-				+0.5
2,005,910	-				-0.5
2,005,970	-				-0.9
2,006,033	+				+0.6
2,006,034	-				-0.0
2,006,034	-				+1.5
2,006,051	+				+1.3
2,006,224	+				-0.1
2,006,229	+				-1.0
2,006,242	+		Echvi_1704	0.10	+0.7
2,006,242	+		Echvi_1704	0.10	-0.6
2,006,297	+		Echvi_1704	0.18	-0.3
2,006,297	+		Echvi_1704	0.18	+0.6
2,006,300	+		Echvi_1704	0.19	-0.2
2,006,301	-		Echvi_1704	0.19	+2.1
2,006,322	-		Echvi_1704	0.22	-2.2
2,006,337	+		Echvi_1704	0.24	-0.3
2,006,369	+		Echvi_1704	0.29	-0.9
2,006,369	+		Echvi_1704	0.29	+0.7
2,006,370	-		Echvi_1704	0.29	+0.1
2,006,404	+		Echvi_1704	0.33	-0.2
2,006,405	-		Echvi_1704	0.34	+1.6
2,006,420	-		Echvi_1704	0.36	+0.5
2,006,420	-		Echvi_1704	0.36	+0.9
2,006,420	-		Echvi_1704	0.36	-0.4
2,006,421	+		Echvi_1704	0.36	+1.0
2,006,421	+		Echvi_1704	0.36	+0.3
2,006,421	+		Echvi_1704	0.36	+0.9
2,006,421	+		Echvi_1704	0.36	+0.4
2,006,421	+		Echvi_1704	0.36	-0.1
2,006,421	+		Echvi_1704	0.36	-0.3
2,006,421	+		Echvi_1704	0.36	-0.9
2,006,422	-		Echvi_1704	0.36	+0.1
2,006,422	-		Echvi_1704	0.36	+0.5
2,006,422	-		Echvi_1704	0.36	-0.4
2,006,422	-		Echvi_1704	0.36	+1.0
2,006,475	+		Echvi_1704	0.44	-0.9
2,006,535	+		Echvi_1704	0.52	+0.7
2,006,535	+		Echvi_1704	0.52	-0.7
2,006,535	+		Echvi_1704	0.52	-1.3
2,006,535	+		Echvi_1704	0.52	+0.5
2,006,536	-		Echvi_1704	0.52	-0.3
2,006,581	+		Echvi_1704	0.59	-0.9
2,006,581	+		Echvi_1704	0.59	+0.7
2,006,581	+		Echvi_1704	0.59	+0.2
2,006,582	-		Echvi_1704	0.59	+0.3
2,006,582	-		Echvi_1704	0.59	-0.3
2,006,582	-				+2.7
2,006,599	+		Echvi_1704	0.61	+0.5
2,006,623	+		Echvi_1704	0.65	-0.7
2,006,623	+		Echvi_1704	0.65	+0.7
2,006,627	-		Echvi_1704	0.65	+0.5
2,006,627	-		Echvi_1704	0.65	-0.4
2,006,627	-		Echvi_1704	0.65	+2.0
2,006,635	+		Echvi_1704	0.66	+1.3
2,006,636	-		Echvi_1704	0.66	-0.3
2,006,659	+		Echvi_1704	0.70	+0.1
2,006,705	+		Echvi_1704	0.76	-0.7
2,006,706	-		Echvi_1704	0.76	+1.1
2,006,770	+		Echvi_1704	0.85	+0.1
2,006,770	+		Echvi_1704	0.85	-0.2
2,006,770	+		Echvi_1704	0.85	+1.5
2,006,770	+		Echvi_1704	0.85	+0.6
2,006,770	+		Echvi_1704	0.85	-0.6
2,006,770	+		Echvi_1704	0.85	+1.5
2,006,792	+		Echvi_1704	0.89	-1.0
2,006,792	+		Echvi_1704	0.89	+0.5
2,006,793	-		Echvi_1704	0.89	+1.1
2,006,902	+				+1.0
2,006,902	+				-0.4
2,006,903	-				-0.2
2,006,920	+				-1.7
2,006,920	+				-0.1
2,006,931	+				+1.2
2,006,932	-				-0.5
2,006,932	-				+1.7
2,006,945	-				+0.8
2,006,957	-				-2.2
2,006,968	-				+0.6
2,006,972	+				-1.2
2,006,981	-				+0.1
2,007,021	+				+0.3
2,007,142	+				+0.8
2,007,168	-				-1.1
2,007,174	-				-0.4
2,007,174	-				-0.8
2,007,186	+				-0.3
2,007,206	+				-0.6
2,007,280	+				+2.3
2,007,297	+				+0.4
2,007,448	+		Echvi_1705	0.22	-0.5
2,007,474	+		Echvi_1705	0.27	+0.6
2,007,474	+		Echvi_1705	0.27	-0.2
2,007,475	-		Echvi_1705	0.28	-2.0
2,007,475	-		Echvi_1705	0.28	-1.3
2,007,476	+		Echvi_1705	0.28	+0.7
2,007,476	+		Echvi_1705	0.28	+0.1
2,007,477	-		Echvi_1705	0.28	-0.1
2,007,477	-		Echvi_1705	0.28	+0.4
2,007,477	-		Echvi_1705	0.28	+0.3
2,007,485	+		Echvi_1705	0.30	-1.3
2,007,697	-		Echvi_1705	0.73	-1.6
2,007,714	-		Echvi_1705	0.76	-0.1
2,007,829	-				-0.2
2,007,868	+				+0.1
2,007,868	+				-0.3
2,007,869	-				-0.2
2,007,869	-				-1.5
2,007,869	-				-0.1
2,007,869	-				+1.4
2,007,869	-				-0.5
2,007,869	-				-0.2