Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1702

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,000,284	+		Echvi_1701	0.32	+0.1
2,000,284	+		Echvi_1701	0.32	+0.3
2,000,285	-		Echvi_1701	0.32	-0.3
2,000,289	-		Echvi_1701	0.32	-0.3
2,000,289	-		Echvi_1701	0.32	-0.6
2,000,293	+		Echvi_1701	0.32	+2.7
2,000,294	-		Echvi_1701	0.32	-0.7
2,000,306	+		Echvi_1701	0.34	-0.0
2,000,306	+		Echvi_1701	0.34	-2.3
2,000,315	+		Echvi_1701	0.34	-0.8
2,000,316	-		Echvi_1701	0.34	-0.6
2,000,316	-		Echvi_1701	0.34	+0.7
2,000,340	-		Echvi_1701	0.36	-0.3
2,000,347	+		Echvi_1701	0.37	-0.5
2,000,347	+		Echvi_1701	0.37	-0.2
2,000,347	+		Echvi_1701	0.37	+0.2
2,000,348	-		Echvi_1701	0.37	-1.4
2,000,360	+		Echvi_1701	0.38	-0.5
2,000,360	+		Echvi_1701	0.38	+0.6
2,000,360	+		Echvi_1701	0.38	-2.4
2,000,360	+		Echvi_1701	0.38	+0.3
2,000,361	-		Echvi_1701	0.38	-0.9
2,000,361	-		Echvi_1701	0.38	+0.1
2,000,361	-		Echvi_1701	0.38	+0.6
2,000,374	+		Echvi_1701	0.39	+2.5
2,000,374	+		Echvi_1701	0.39	-0.0
2,000,375	-		Echvi_1701	0.40	-0.0
2,000,376	+		Echvi_1701	0.40	+0.9
2,000,377	-		Echvi_1701	0.40	-0.5
2,000,378	+		Echvi_1701	0.40	-0.7
2,000,384	+		Echvi_1701	0.40	-1.9
2,000,409	-		Echvi_1701	0.43	-0.7
2,000,409	-		Echvi_1701	0.43	-0.2
2,000,409	-		Echvi_1701	0.43	-0.4
2,000,413	+		Echvi_1701	0.43	-1.0
2,000,414	-		Echvi_1701	0.43	+0.8
2,000,533	+		Echvi_1701	0.53	-0.6
2,000,533	+		Echvi_1701	0.53	-0.5
2,000,533	+		Echvi_1701	0.53	-0.3
2,000,533	+		Echvi_1701	0.53	+0.2
2,000,533	+		Echvi_1701	0.53	-0.8
2,000,534	-		Echvi_1701	0.53	-0.0
2,000,534	-		Echvi_1701	0.53	+0.1
2,000,534	-		Echvi_1701	0.53	-1.4
2,000,627	-		Echvi_1701	0.62	+0.7
2,000,640	-		Echvi_1701	0.63	+0.9
2,000,640	-		Echvi_1701	0.63	+0.1
2,000,646	+		Echvi_1701	0.63	+0.6
2,000,647	-		Echvi_1701	0.63	-2.4
2,000,651	-		Echvi_1701	0.64	-2.0
2,000,686	-		Echvi_1701	0.67	-2.4
2,000,697	-		Echvi_1701	0.68	+0.5
2,000,714	+		Echvi_1701	0.69	-0.3
2,000,714	+		Echvi_1701	0.69	+0.6
2,000,715	-		Echvi_1701	0.69	-0.2
2,000,779	+		Echvi_1701	0.75	+1.1
2,000,780	-		Echvi_1701	0.75	+0.5
2,000,783	+		Echvi_1701	0.75	-0.4
2,000,784	-		Echvi_1701	0.75	-0.6
2,000,784	-		Echvi_1701	0.75	-0.2
2,000,872	+		Echvi_1701	0.83	-0.3
2,000,872	+		Echvi_1701	0.83	+0.2
2,000,873	-		Echvi_1701	0.83	+1.0
2,000,881	+		Echvi_1701	0.84	-0.3
2,000,882	-		Echvi_1701	0.84	+0.3
2,000,884	-		Echvi_1701	0.84	-2.1
2,000,898	-		Echvi_1701	0.85	-0.2
2,000,941	+		Echvi_1701	0.89	+0.7
2,000,941	+		Echvi_1701	0.89	-0.5
2,000,941	+		Echvi_1701	0.89	+0.2
2,000,942	-		Echvi_1701	0.89	-0.9
2,000,951	+				+0.1
2,000,952	-				+0.1
2,000,952	-				+1.9
2,000,952	-				-1.1
2,000,957	-				-0.5
2,000,985	-				+0.2
2,001,014	+				-1.7
2,001,015	-				-0.0
2,001,015	-				+0.9
2,001,022	-				+2.7
2,001,022	-				+0.9
2,001,022	-				-0.3
2,001,047	-				+0.4
2,001,113	-				-1.3
2,001,214	+				-0.2
2,001,228	-				+1.0
2,001,232	-				-0.5
2,001,232	-				+2.7
2,001,259	+				+0.0
2,001,259	+				-0.9
2,001,260	-				-0.0
2,001,260	-				-0.5
2,001,262	+				-0.5
2,001,263	-				-0.4
2,001,328	+				+0.0
2,001,328	+				-0.2
2,001,403	-				-1.5
2,001,458	+				+0.3
2,001,490	+				+3.2
2,001,491	-				+0.2
2,001,491	-				+0.3
2,001,491	-				+0.2
2,001,493	+				-1.9
2,001,493	+				-2.1
2,001,493	+				+1.1
2,001,494	-				-3.0
2,001,494	-				-0.8
2,001,494	-				+0.5
2,001,494	-				-0.5
2,001,494	-				-0.2
2,001,608	+		Echvi_1702	0.14	+0.5
2,001,609	-		Echvi_1702	0.14	-0.7
2,001,609	-		Echvi_1702	0.14	+1.6
2,001,609	-		Echvi_1702	0.14	+0.4
2,001,640	-		Echvi_1702	0.15	+0.3
2,001,640	-		Echvi_1702	0.15	-0.1
2,001,663	+		Echvi_1702	0.16	-0.5
2,001,708	+		Echvi_1702	0.18	-0.6
2,001,708	+		Echvi_1702	0.18	+1.7
2,001,709	-		Echvi_1702	0.18	-0.8
2,001,709	-		Echvi_1702	0.18	-1.9
2,001,709	-		Echvi_1702	0.18	+1.1
2,001,802	+		Echvi_1702	0.22	+0.8
2,001,803	-		Echvi_1702	0.22	+0.9
2,001,803	-		Echvi_1702	0.22	+0.7
2,001,806	+		Echvi_1702	0.22	+1.0
2,001,807	-		Echvi_1702	0.22	+0.2
2,001,889	-		Echvi_1702	0.25	-1.7
2,001,985	+		Echvi_1702	0.29	+0.2
2,001,985	+		Echvi_1702	0.29	+0.7
2,001,986	-		Echvi_1702	0.29	-0.2
2,001,989	-		Echvi_1702	0.29	-0.7
2,001,989	-		Echvi_1702	0.29	-0.3
2,002,039	-		Echvi_1702	0.31	-0.1
2,002,217	+		Echvi_1702	0.38	+0.7
2,002,217	+		Echvi_1702	0.38	+0.6
2,002,218	-		Echvi_1702	0.38	+0.2
2,002,309	+		Echvi_1702	0.42	+0.6
2,002,309	+		Echvi_1702	0.42	+0.0
2,002,309	+		Echvi_1702	0.42	-0.2
2,002,310	-		Echvi_1702	0.42	-0.5
2,002,310	-		Echvi_1702	0.42	-0.4
2,002,310	-		Echvi_1702	0.42	+3.7
2,002,310	-		Echvi_1702	0.42	-0.3
2,002,316	+		Echvi_1702	0.42	+0.6
2,002,326	-		Echvi_1702	0.43	-1.7
2,002,354	+		Echvi_1702	0.44	+1.1
2,002,371	-		Echvi_1702	0.45	-0.6
2,002,372	+		Echvi_1702	0.45	+1.1
2,002,393	+		Echvi_1702	0.46	-0.7
2,002,426	+		Echvi_1702	0.47	-3.0
2,002,427	-		Echvi_1702	0.47	+0.5
2,002,427	-		Echvi_1702	0.47	-1.6
2,002,455	-		Echvi_1702	0.48	-0.1
2,002,511	+		Echvi_1702	0.50	+1.1
2,002,554	-		Echvi_1702	0.52	+0.8
2,002,580	-		Echvi_1702	0.53	-0.5
2,002,598	+		Echvi_1702	0.54	+1.3
2,002,623	-		Echvi_1702	0.55	+0.3
2,002,624	+		Echvi_1702	0.55	+2.7
2,002,664	+		Echvi_1702	0.57	+0.8
2,002,665	-		Echvi_1702	0.57	+0.5
2,002,694	-		Echvi_1702	0.58	+0.5
2,002,699	-		Echvi_1702	0.58	+0.7
2,002,699	-		Echvi_1702	0.58	-0.3
2,002,737	-		Echvi_1702	0.60	-0.5
2,002,745	-		Echvi_1702	0.60	-0.2
2,002,760	+		Echvi_1702	0.60	-0.2
2,002,805	+		Echvi_1702	0.62	-0.3
2,002,805	+		Echvi_1702	0.62	+1.1
2,002,892	+		Echvi_1702	0.66	+0.1
2,002,895	-		Echvi_1702	0.66	-1.4
2,002,895	-		Echvi_1702	0.66	-0.7
2,002,904	+		Echvi_1702	0.66	-0.7
2,002,905	-		Echvi_1702	0.66	-0.5
2,002,905	-		Echvi_1702	0.66	-1.9
2,002,953	+		Echvi_1702	0.68	-0.9
2,002,956	+		Echvi_1702	0.68	-1.0
2,002,981	+		Echvi_1702	0.69	-0.2
2,002,981	+		Echvi_1702	0.69	+1.3
2,002,981	+		Echvi_1702	0.69	-0.8
2,002,982	-		Echvi_1702	0.70	-0.4
2,002,982	-		Echvi_1702	0.70	+1.9
2,002,982	-		Echvi_1702	0.70	+0.8
2,002,982	-		Echvi_1702	0.70	+1.0
2,002,982	-		Echvi_1702	0.70	+0.7
2,002,982	-		Echvi_1702	0.70	-0.6
2,002,982	-		Echvi_1702	0.70	+1.7
2,002,985	+		Echvi_1702	0.70	+0.4
2,002,986	-		Echvi_1702	0.70	+2.5
2,003,025	-		Echvi_1702	0.71	+1.7
2,003,094	+		Echvi_1702	0.74	-0.2
2,003,095	-		Echvi_1702	0.74	-2.5
2,003,114	+		Echvi_1702	0.75	+2.7
2,003,130	-		Echvi_1702	0.76	+3.7
2,003,193	+		Echvi_1702	0.78	+1.4
2,003,211	+		Echvi_1702	0.79	-0.2
2,003,212	-		Echvi_1702	0.79	+0.5
2,003,231	-		Echvi_1702	0.80	-0.3
2,003,231	-		Echvi_1702	0.80	+1.3
2,003,231	-		Echvi_1702	0.80	+0.3
2,003,625	+				+0.7
2,003,625	+				-0.5
2,003,672	-				+0.7
2,003,678	-				-0.7
2,003,739	+				+0.0
2,003,740	-				+0.8
2,003,919	+				+0.7
2,003,920	-				-1.6
2,003,925	+				+1.3
2,003,928	+				-1.6
2,003,928	+				+0.9
2,003,928	+				+0.4
2,003,929	-				+1.7
2,003,945	-				+0.2
2,003,948	+				+4.0
2,003,949	-				+0.1
2,004,133	-				+0.1
2,004,334	-		Echvi_1703	0.20	+0.9
2,004,334	-		Echvi_1703	0.20	+0.3
2,004,339	+		Echvi_1703	0.20	+1.5
2,004,339	+		Echvi_1703	0.20	+0.2
2,004,340	-		Echvi_1703	0.20	+1.3
2,004,404	+		Echvi_1703	0.23	-0.7
2,004,446	-		Echvi_1703	0.25	+0.4
2,004,450	+		Echvi_1703	0.25	-0.8
2,004,486	+		Echvi_1703	0.27	-0.1
2,004,487	-		Echvi_1703	0.27	-0.1
2,004,487	-		Echvi_1703	0.27	-1.1
2,004,504	+		Echvi_1703	0.28	+1.1
2,004,556	-		Echvi_1703	0.31	-0.4
2,004,604	+		Echvi_1703	0.33	+1.1
2,004,604	+		Echvi_1703	0.33	-0.4
2,004,604	+		Echvi_1703	0.33	+1.3
2,004,605	-		Echvi_1703	0.33	-0.4
2,004,626	-		Echvi_1703	0.34	+0.3
2,004,643	-		Echvi_1703	0.35	-0.3