Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1663

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,931,615	+		Echvi_1661	0.72	+0.9
1,931,615	+		Echvi_1661	0.72	+0.4
1,931,619	-		Echvi_1661	0.72	+1.5
1,931,713	-		Echvi_1661	0.75	+0.2
1,931,757	+		Echvi_1661	0.77	+1.6
1,931,757	+		Echvi_1661	0.77	-1.0
1,931,757	+		Echvi_1661	0.77	+1.0
1,931,758	-		Echvi_1661	0.77	-1.0
1,931,758	-		Echvi_1661	0.77	-0.0
1,931,759	+		Echvi_1661	0.77	-0.7
1,931,760	-		Echvi_1661	0.77	+0.7
1,931,780	+		Echvi_1661	0.78	-0.0
1,931,780	+		Echvi_1661	0.78	-0.1
1,931,782	+		Echvi_1661	0.78	+0.3
1,931,782	+		Echvi_1661	0.78	+1.9
1,931,783	-		Echvi_1661	0.78	-0.3
1,931,783	-		Echvi_1661	0.78	+0.4
1,932,029	-		Echvi_1661	0.87	-0.8
1,932,059	+		Echvi_1661	0.88	+0.7
1,932,059	+		Echvi_1661	0.88	-2.6
1,932,071	+		Echvi_1661	0.88	-1.1
1,932,072	-		Echvi_1661	0.88	-0.9
1,932,072	-		Echvi_1661	0.88	-0.2
1,932,073	+		Echvi_1661	0.88	-0.3
1,932,073	+		Echvi_1661	0.88	+1.3
1,932,074	-		Echvi_1661	0.88	-0.1
1,932,161	+				+0.7
1,932,162	-				-1.1
1,932,294	+				+0.9
1,932,294	+				+0.8
1,932,305	+				+1.0
1,932,305	+				-1.1
1,932,306	-				-0.2
1,932,307	+				+3.1
1,932,307	+				-0.4
1,932,307	+				+0.1
1,932,307	+				-0.9
1,932,307	+				+0.0
1,932,307	+				+0.7
1,932,307	+				+0.2
1,932,307	+				+0.5
1,932,307	+				+0.7
1,932,307	+				+1.0
1,932,308	-				-1.1
1,932,308	-				+0.1
1,932,308	-				-2.0
1,932,308	-				+0.8
1,932,308	-				+0.9
1,932,308	-				+0.7
1,932,308	-				+0.1
1,932,308	-				+0.2
1,932,386	+				+0.5
1,932,387	-				+1.7
1,932,390	+				+0.4
1,932,390	+				+0.2
1,932,393	+				+0.7
1,932,397	+				+1.3
1,932,411	-				-0.4
1,932,440	-				-1.4
1,932,440	-				-0.4
1,932,494	+		Echvi_1662	0.34	+0.4
1,932,560	+		Echvi_1662	0.69	-0.3
1,932,561	-		Echvi_1662	0.69	+0.7
1,932,581	-		Echvi_1662	0.80	+2.8
1,932,585	+		Echvi_1662	0.82	+2.9
1,932,595	+		Echvi_1662	0.87	+1.9
1,932,641	-				+0.7
1,932,658	+				-0.6
1,932,739	-				+0.3
1,932,739	-				-0.9
1,932,872	+		Echvi_1663	0.20	+0.6
1,932,872	+		Echvi_1663	0.20	-0.7
1,932,876	+		Echvi_1663	0.20	-0.6
1,932,876	+		Echvi_1663	0.20	+0.8
1,932,935	-		Echvi_1663	0.25	+3.4
1,932,949	+		Echvi_1663	0.26	+0.2
1,932,950	-		Echvi_1663	0.26	-0.4
1,932,955	+		Echvi_1663	0.26	-1.3
1,932,959	+		Echvi_1663	0.26	+0.8
1,932,960	-		Echvi_1663	0.26	-1.4
1,932,960	-		Echvi_1663	0.26	-1.8
1,932,960	-		Echvi_1663	0.26	-1.8
1,933,074	+		Echvi_1663	0.35	+1.8
1,933,075	-		Echvi_1663	0.35	+0.7
1,933,129	+		Echvi_1663	0.39	-1.6
1,933,129	+		Echvi_1663	0.39	+0.1
1,933,129	+		Echvi_1663	0.39	-1.1
1,933,129	+		Echvi_1663	0.39	+0.5
1,933,154	+		Echvi_1663	0.41	+0.7
1,933,154	+		Echvi_1663	0.41	-2.2
1,933,155	-		Echvi_1663	0.41	-2.0
1,933,267	+		Echvi_1663	0.50	-0.9
1,933,304	-		Echvi_1663	0.53	-0.6
1,933,339	+		Echvi_1663	0.55	-1.6
1,933,339	+		Echvi_1663	0.55	+0.2
1,933,340	-		Echvi_1663	0.55	-0.2
1,933,346	+		Echvi_1663	0.56	+0.3
1,933,346	+		Echvi_1663	0.56	+0.4
1,933,366	-		Echvi_1663	0.57	+0.2
1,933,366	-		Echvi_1663	0.57	+0.7
1,933,435	-		Echvi_1663	0.63	+0.8
1,933,455	+		Echvi_1663	0.64	+0.0
1,933,455	+		Echvi_1663	0.64	+0.5
1,933,455	+		Echvi_1663	0.64	+1.0
1,933,475	+		Echvi_1663	0.66	-0.9
1,933,547	+		Echvi_1663	0.71	-0.3
1,933,547	+		Echvi_1663	0.71	-1.6
1,933,638	+		Echvi_1663	0.78	+0.7
1,933,727	+		Echvi_1663	0.85	-1.6
1,933,728	-		Echvi_1663	0.85	+0.3
1,933,730	+		Echvi_1663	0.85	+1.0
1,933,730	+		Echvi_1663	0.85	+0.4
1,933,739	+		Echvi_1663	0.86	-0.9
1,933,742	+		Echvi_1663	0.86	+1.0
1,933,886	+				+1.0
1,933,945	+				-0.6
1,933,946	-				+1.1
1,933,946	-				-2.3
1,933,949	+				-0.8
1,933,957	+				+0.6
1,933,965	-				-1.2
1,933,965	-				-0.5
1,933,993	+				-1.0
1,933,993	+				-0.1
1,934,068	+				-1.5
1,934,071	-				-0.0
1,934,071	-				+0.1
1,934,071	-				-1.2
1,934,071	-				+0.1
1,934,115	+				-0.9
1,934,116	-				-0.2
1,934,116	-				-1.6
1,934,133	-				+0.2
1,934,191	+				+0.3
1,934,226	+				-0.2
1,934,226	+				-1.8
1,934,238	-				-0.8
1,934,298	+				-0.2
1,934,299	-				-1.4
1,934,299	-				+0.6
1,934,299	-				+0.4
1,934,346	+				-0.3
1,934,522	+		Echvi_1664	0.14	+0.8
1,934,522	+				+2.7
1,934,523	-		Echvi_1664	0.14	+0.2
1,934,567	+		Echvi_1664	0.16	-1.4
1,934,568	-		Echvi_1664	0.16	-0.1
1,934,640	+		Echvi_1664	0.19	+0.8
1,934,641	-		Echvi_1664	0.20	-1.1
1,934,658	-		Echvi_1664	0.20	+0.1
1,934,660	-		Echvi_1664	0.20	-1.5
1,934,660	-		Echvi_1664	0.20	-0.0
1,934,702	-		Echvi_1664	0.23	+0.1
1,934,878	+		Echvi_1664	0.32	-1.4