Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1608

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,847,817	-		Echvi_1606	0.66	+0.7
1,847,968	+		Echvi_1606	0.80	+0.0
1,848,072	+		Echvi_1606	0.90	-0.7
1,848,141	-				+0.1
1,848,173	+				-2.6
1,848,186	-				+0.5
1,848,191	-				-0.6
1,848,217	-				+0.1
1,848,244	+				-0.2
1,848,245	-				-1.3
1,848,277	+				+0.4
1,848,277	+				+0.5
1,848,277	+				-0.4
1,848,278	-				+1.4
1,848,278	-				-1.6
1,848,278	-				-1.2
1,848,278	-				-0.2
1,848,311	-				-0.6
1,848,322	-				+0.4
1,848,377	-				+0.2
1,848,419	+				-0.4
1,848,602	+		Echvi_1607	0.75	-0.2
1,848,639	+		Echvi_1607	0.89	+1.2
1,848,675	-				+0.8
1,848,702	-				+0.7
1,848,707	-				-0.9
1,848,752	+		Echvi_1608	0.12	-0.3
1,848,820	+		Echvi_1608	0.26	-0.8
1,848,837	+		Echvi_1608	0.29	-0.9
1,848,900	+		Echvi_1608	0.42	-0.6
1,848,900	+		Echvi_1608	0.42	-0.6
1,848,900	+		Echvi_1608	0.42	-0.3
1,848,901	-		Echvi_1608	0.42	-2.1
1,848,901	-		Echvi_1608	0.42	+0.1
1,848,904	+		Echvi_1608	0.43	-1.8
1,848,904	+		Echvi_1608	0.43	-1.4
1,848,905	-		Echvi_1608	0.43	-2.9
1,848,929	+		Echvi_1608	0.48	-2.1
1,848,930	-		Echvi_1608	0.48	-0.2
1,848,954	+		Echvi_1608	0.53	-0.5
1,848,954	+		Echvi_1608	0.53	-1.5
1,848,955	-		Echvi_1608	0.53	-2.1
1,848,958	+		Echvi_1608	0.53	-2.0
1,848,958	+		Echvi_1608	0.53	-0.5
1,848,958	+		Echvi_1608	0.53	-2.0
1,848,959	-		Echvi_1608	0.54	+1.0
1,849,042	-		Echvi_1608	0.70	+0.2
1,849,042	-		Echvi_1608	0.70	-0.6
1,849,071	+		Echvi_1608	0.76	-1.1
1,849,071	+		Echvi_1608	0.76	-0.6
1,849,071	+		Echvi_1608	0.76	+1.7
1,849,072	-		Echvi_1608	0.76	+0.7
1,849,073	+		Echvi_1608	0.76	+2.3
1,849,076	+		Echvi_1608	0.77	-0.8
1,849,076	+		Echvi_1608	0.77	-0.3
1,849,077	-		Echvi_1608	0.77	-0.1
1,849,077	-		Echvi_1608	0.77	-1.1
1,849,077	-		Echvi_1608	0.77	-1.0
1,849,082	-		Echvi_1608	0.78	+0.1
1,849,158	+				+0.4
1,849,158	+				-0.7
1,849,159	-				-0.5
1,849,159	-				-2.1
1,849,159	-				-1.8
1,849,200	+				-0.7
1,849,200	+				-1.3
1,849,200	+				-0.1
1,849,204	+				-0.9
1,849,205	-				+1.5
1,849,205	-				-0.2
1,849,209	+				-0.5
1,849,325	-				+0.7
1,849,325	-				-2.3
1,849,358	+				-0.8
1,849,380	+				-0.5
1,849,380	+				+0.6
1,849,380	+				-0.3
1,849,398	-				+0.5
1,849,405	-				+1.0
1,849,418	+				+0.2
1,849,435	+				+0.2
1,849,443	+				+0.1
1,849,443	+				-1.4
1,849,443	+				-1.4
1,849,443	+				-0.1
1,849,444	-				-1.1
1,849,444	-				-1.7
1,849,445	+				-0.1
1,849,445	+				+0.8
1,849,445	+				+0.4
1,849,445	+				-0.5
1,849,445	+				-0.1
1,849,445	+				-0.7
1,849,445	+				-0.9
1,849,446	-				+1.0
1,849,446	-				-1.1
1,849,450	-				-1.0
1,849,468	+				+0.9
1,849,477	-				+0.1
1,849,498	+				-0.0
1,849,499	-				-1.4
1,849,559	-				-0.5
1,849,575	+				-0.7
1,849,643	+				-0.8
1,849,645	+				-0.3
1,849,645	+				-0.0
1,849,645	+				-0.6
1,849,646	-				+1.7
1,849,695	+		Echvi_1609	0.10	+0.4
1,849,695	+		Echvi_1609	0.10	-0.1
1,849,695	+		Echvi_1609	0.10	+0.7
1,849,695	+		Echvi_1609	0.10	-0.4
1,849,696	-		Echvi_1609	0.10	-0.9
1,849,696	-		Echvi_1609	0.10	+0.1
1,849,696	-		Echvi_1609	0.10	+0.9
1,849,696	-		Echvi_1609	0.10	-1.1
1,849,716	+		Echvi_1609	0.11	-1.5
1,849,717	-		Echvi_1609	0.11	+1.4
1,849,725	-		Echvi_1609	0.11	-0.1
1,849,728	-		Echvi_1609	0.12	+0.3
1,849,729	+		Echvi_1609	0.12	+0.1
1,849,729	+		Echvi_1609	0.12	-0.1
1,849,729	+		Echvi_1609	0.12	-0.3
1,849,730	-		Echvi_1609	0.12	-1.0
1,849,730	-		Echvi_1609	0.12	-0.1
1,849,770	+		Echvi_1609	0.13	+0.1
1,849,770	+		Echvi_1609	0.13	+1.5
1,849,771	-		Echvi_1609	0.13	+0.9
1,849,771	-		Echvi_1609	0.13	+1.5
1,849,771	-		Echvi_1609	0.13	+0.0
1,849,771	-		Echvi_1609	0.13	+0.1
1,849,815	-		Echvi_1609	0.15	+0.3
1,849,845	+		Echvi_1609	0.17	+0.5
1,849,845	+		Echvi_1609	0.17	-0.6
1,849,845	+		Echvi_1609	0.17	+1.3
1,849,845	+		Echvi_1609	0.17	-0.1
1,849,845	+		Echvi_1609	0.17	-1.0
1,849,845	+		Echvi_1609	0.17	+0.4
1,849,846	-		Echvi_1609	0.17	-0.5
1,849,846	-		Echvi_1609	0.17	-1.5
1,849,846	-		Echvi_1609	0.17	-0.4
1,849,846	-		Echvi_1609	0.17	+0.9
1,849,846	-		Echvi_1609	0.17	+0.3
1,849,846	-		Echvi_1609	0.17	-0.9
1,849,846	-		Echvi_1609	0.17	+1.4
1,849,846	-		Echvi_1609	0.17	-0.9
1,849,848	-		Echvi_1609	0.17	-2.4
1,849,848	-		Echvi_1609	0.17	-0.9
1,849,849	+		Echvi_1609	0.17	+0.4
1,849,849	+		Echvi_1609	0.17	-0.6
1,849,850	-		Echvi_1609	0.17	-0.2
1,849,866	-		Echvi_1609	0.18	+0.2
1,849,875	+		Echvi_1609	0.18	+0.7
1,849,876	-		Echvi_1609	0.18	-0.5
1,849,939	-		Echvi_1609	0.21	-0.2
1,849,964	+		Echvi_1609	0.22	+2.0
1,849,965	-		Echvi_1609	0.22	-0.8
1,849,965	-		Echvi_1609	0.22	+0.5
1,849,970	-		Echvi_1609	0.22	-1.4
1,849,970	-		Echvi_1609	0.22	-0.2
1,849,973	+		Echvi_1609	0.23	-0.3
1,849,973	+		Echvi_1609	0.23	-0.3
1,849,973	+		Echvi_1609	0.23	-1.1
1,849,974	-		Echvi_1609	0.23	-0.6
1,849,974	-		Echvi_1609	0.23	-1.4
1,849,988	+		Echvi_1609	0.23	+0.8
1,850,036	+		Echvi_1609	0.25	-0.2
1,850,037	-		Echvi_1609	0.25	-2.1
1,850,102	-		Echvi_1609	0.28	-0.8
1,850,158	-		Echvi_1609	0.31	-2.3
1,850,158	-		Echvi_1609	0.31	+1.3
1,850,169	+		Echvi_1609	0.31	+0.4
1,850,170	-		Echvi_1609	0.31	+1.4