Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1560

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,790,801	+		Echvi_1559	0.80	+1.1
1,790,801	+		Echvi_1559	0.80	+0.4
1,790,873	+		Echvi_1559	0.83	+1.5
1,790,873	+		Echvi_1559	0.83	+0.8
1,790,874	-		Echvi_1559	0.83	-1.3
1,790,950	-		Echvi_1559	0.85	-0.0
1,790,981	+		Echvi_1559	0.86	+0.4
1,791,055	+		Echvi_1559	0.89	+2.4
1,791,055	+		Echvi_1559	0.89	+0.7
1,791,056	-		Echvi_1559	0.89	+0.3
1,791,056	-		Echvi_1559	0.89	+0.7
1,791,057	+				+1.7
1,791,114	-				-0.6
1,791,115	+				-0.2
1,791,118	+				+0.9
1,791,119	-				+0.4
1,791,119	-				-0.7
1,791,119	-				-0.5
1,791,119	-				+0.4
1,791,121	-				+0.8
1,791,136	-				-0.7
1,791,175	+				-0.0
1,791,176	-				+0.8
1,791,177	+				-0.4
1,791,178	-				+0.8
1,791,198	-				+0.5
1,791,276	+				+1.0
1,791,277	-				-0.9
1,791,302	-				+1.0
1,791,362	+				+0.9
1,791,362	+				-0.0
1,791,363	-				-0.3
1,791,394	-				+0.2
1,791,398	-				+1.0
1,791,402	-				+0.7
1,791,418	-				+0.5
1,791,418	-				+0.2
1,791,420	-				-0.6
1,791,431	+				-0.2
1,791,434	+				-0.1
1,791,434	+				-0.0
1,791,435	-				-0.8
1,791,483	+				+1.2
1,791,518	+				+0.2
1,791,529	+				+0.9
1,791,541	-				-0.0
1,791,541	-				-0.9
1,791,541	-				+0.1
1,791,541	-				+0.5
1,791,564	+				-1.3
1,791,565	-				+0.2
1,791,570	-				+0.5
1,791,570	-				-0.7
1,791,582	+				+0.9
1,791,583	-				+0.2
1,791,585	+				+1.3
1,791,585	+				+1.1
1,791,586	-				-1.8
1,791,597	+				+0.4
1,791,597	+				+1.4
1,791,597	+				+0.7
1,791,599	+				+0.1
1,791,599	+				+1.8
1,791,599	+				+0.7
1,791,600	-				+0.0
1,791,600	-				-0.0
1,791,607	-				-0.2
1,791,607	-				+0.3
1,791,735	+				+0.1
1,791,735	+				+0.4
1,791,735	+				-1.2
1,791,735	+				+0.5
1,791,736	-				-1.7
1,791,736	-				+1.5
1,791,824	-				-3.0
1,791,846	+				+1.5
1,791,846	+				+0.9
1,791,846	+				-0.7
1,791,846	+				-0.5
1,791,846	+				-0.3
1,791,846	+				+0.1
1,791,860	-				-0.3
1,791,985	+				-0.3
1,791,986	-				-0.9
1,791,986	-				-0.2
1,791,986	-				-0.1
1,792,006	+				-1.3
1,792,006	+				-2.0
1,792,006	+				-0.1
1,792,048	+				+0.1
1,792,049	-				+1.2
1,792,049	-				-0.5
1,792,049	-				-0.3
1,792,099	-		Echvi_1560	0.11	-0.3
1,792,150	+		Echvi_1560	0.13	+2.1
1,792,153	-		Echvi_1560	0.13	-0.4
1,792,243	+		Echvi_1560	0.16	+1.0
1,792,243	+		Echvi_1560	0.16	+0.7
1,792,243	+		Echvi_1560	0.16	-0.0
1,792,243	+		Echvi_1560	0.16	+0.7
1,792,244	-		Echvi_1560	0.16	-0.3
1,792,252	-		Echvi_1560	0.16	+0.1
1,792,284	+		Echvi_1560	0.17	+0.8
1,792,305	+		Echvi_1560	0.17	+0.3
1,792,360	+		Echvi_1560	0.19	+0.4
1,792,361	-		Echvi_1560	0.19	-0.8
1,792,361	-		Echvi_1560	0.19	-1.1
1,792,362	+		Echvi_1560	0.19	-0.2
1,792,400	-		Echvi_1560	0.20	-3.3
1,792,435	-		Echvi_1560	0.21	-0.7
1,792,441	+		Echvi_1560	0.22	-0.0
1,792,441	+		Echvi_1560	0.22	-0.8
1,792,441	+		Echvi_1560	0.22	+0.1
1,792,447	+		Echvi_1560	0.22	-0.3
1,792,496	-		Echvi_1560	0.23	-0.9
1,792,536	-		Echvi_1560	0.24	-1.1
1,792,539	+		Echvi_1560	0.25	+1.7
1,792,558	+		Echvi_1560	0.25	-0.5
1,792,596	-		Echvi_1560	0.26	+0.5
1,792,607	+		Echvi_1560	0.27	+0.3
1,792,658	-		Echvi_1560	0.28	-0.9
1,792,681	+		Echvi_1560	0.29	+1.7
1,792,681	+		Echvi_1560	0.29	-0.5
1,792,682	-		Echvi_1560	0.29	-0.8
1,792,817	-		Echvi_1560	0.33	+0.1
1,792,907	-		Echvi_1560	0.36	-0.9
1,792,950	+		Echvi_1560	0.37	+1.1
1,792,987	+		Echvi_1560	0.38	+1.9
1,792,987	+		Echvi_1560	0.38	-0.2
1,792,987	+		Echvi_1560	0.38	+1.3
1,792,988	-		Echvi_1560	0.38	-0.3
1,792,988	-		Echvi_1560	0.38	+0.5
1,792,988	-		Echvi_1560	0.38	+0.5
1,792,988	-		Echvi_1560	0.38	-2.1
1,792,994	-		Echvi_1560	0.38	+0.2
1,793,095	+		Echvi_1560	0.42	-0.3
1,793,231	-		Echvi_1560	0.46	+0.8
1,793,236	+		Echvi_1560	0.46	-0.2
1,793,237	-		Echvi_1560	0.46	-0.2
1,793,270	-		Echvi_1560	0.47	+0.1
1,793,270	-		Echvi_1560	0.47	-1.8
1,793,270	-		Echvi_1560	0.47	-1.4
1,793,308	-		Echvi_1560	0.48	-1.0
1,793,335	-		Echvi_1560	0.49	-0.8
1,793,542	+		Echvi_1560	0.55	+0.1
1,793,543	-		Echvi_1560	0.55	+0.4
1,793,543	-		Echvi_1560	0.55	-1.0
1,793,543	-		Echvi_1560	0.55	-0.6
1,793,545	-		Echvi_1560	0.55	+0.4
1,793,548	-		Echvi_1560	0.55	-0.1
1,793,629	+		Echvi_1560	0.58	+0.8
1,793,629	+		Echvi_1560	0.58	+0.5
1,793,629	+		Echvi_1560	0.58	-0.5
1,793,632	+		Echvi_1560	0.58	-0.2
1,793,632	+		Echvi_1560	0.58	-1.2
1,793,633	-		Echvi_1560	0.58	+0.2
1,793,633	-		Echvi_1560	0.58	+0.1
1,793,633	-		Echvi_1560	0.58	-1.1
1,793,633	-		Echvi_1560	0.58	+1.2
1,793,633	-		Echvi_1560	0.58	+0.5
1,793,685	+		Echvi_1560	0.60	+1.4
1,793,685	+		Echvi_1560	0.60	+1.0
1,793,686	-		Echvi_1560	0.60	-0.8
1,793,686	-		Echvi_1560	0.60	-0.6
1,793,717	+		Echvi_1560	0.61	+1.4
1,793,873	-		Echvi_1560	0.65	+0.4
1,793,966	-		Echvi_1560	0.68	+0.4
1,793,966	-				+0.7
1,793,972	+		Echvi_1560	0.68	+0.5
1,793,973	-		Echvi_1560	0.68	-1.0
1,794,007	-		Echvi_1560	0.69	-0.2
1,794,010	+		Echvi_1560	0.70	+0.8
1,794,027	+		Echvi_1560	0.70	+2.1
1,794,027	+		Echvi_1560	0.70	-0.3
1,794,028	-		Echvi_1560	0.70	+0.7
1,794,028	-		Echvi_1560	0.70	-1.0
1,794,037	-		Echvi_1560	0.70	-0.5
1,794,037	-		Echvi_1560	0.70	-0.8
1,794,037	-		Echvi_1560	0.70	-0.6
1,794,059	-		Echvi_1560	0.71	-0.1
1,794,214	-		Echvi_1560	0.76	+1.6
1,794,281	+		Echvi_1560	0.78	+3.5
1,794,282	-		Echvi_1560	0.78	-0.4
1,794,369	-		Echvi_1560	0.81	-0.2
1,794,369	-		Echvi_1560	0.81	-0.1
1,794,413	+		Echvi_1560	0.82	+0.7
1,794,413	+		Echvi_1560	0.82	-0.6
1,794,414	-		Echvi_1560	0.82	-0.3
1,794,419	-		Echvi_1560	0.82	-1.3
1,794,419	-		Echvi_1560	0.82	+0.0
1,794,419	-		Echvi_1560	0.82	-0.4
1,794,420	+		Echvi_1560	0.82	+1.0
1,794,420	+		Echvi_1560	0.82	-0.5
1,794,420	+		Echvi_1560	0.82	+0.9
1,794,420	+		Echvi_1560	0.82	-0.6
1,794,420	+		Echvi_1560	0.82	-0.1
1,794,420	+		Echvi_1560	0.82	+1.7
1,794,420	+		Echvi_1560	0.82	+0.6
1,794,420	+		Echvi_1560	0.82	+0.8
1,794,420	+		Echvi_1560	0.82	-0.9
1,794,421	-		Echvi_1560	0.82	-0.8
1,794,421	-		Echvi_1560	0.82	-1.6
1,794,421	-		Echvi_1560	0.82	+0.4
1,794,421	-		Echvi_1560	0.82	+2.1
1,794,421	-		Echvi_1560	0.82	+0.1
1,794,421	-		Echvi_1560	0.82	+0.4
1,794,421	-		Echvi_1560	0.82	-1.1
1,794,421	-		Echvi_1560	0.82	-1.2
1,794,424	+		Echvi_1560	0.82	+1.1
1,794,424	+		Echvi_1560	0.82	+0.5
1,794,425	-		Echvi_1560	0.82	-0.5
1,794,425	-		Echvi_1560	0.82	+0.1
1,794,425	-		Echvi_1560	0.82	-0.1
1,794,425	-		Echvi_1560	0.82	-0.9
1,794,425	-		Echvi_1560	0.82	-0.4
1,794,425	-		Echvi_1560	0.82	-0.1
1,794,557	+		Echvi_1560	0.86	+0.3
1,794,557	+		Echvi_1560	0.86	+1.4
1,794,558	-		Echvi_1560	0.86	-0.8
1,794,591	-		Echvi_1560	0.87	-0.2
1,794,695	-				-0.2
1,794,736	-				+0.4
1,795,033	+				+0.6
1,795,034	-				+0.3
1,795,034	-				-0.5
1,795,093	-				-0.4
1,795,123	+				+0.4
1,795,139	+				-0.6
1,795,212	+				-1.5
1,795,216	-				+0.8
1,795,225	+				+1.9
1,795,225	+				+0.9
1,795,225	+				-0.6
1,795,225	+				+0.1
1,795,226	-				+1.0
1,795,259	-		Echvi_1561	0.12	-0.6
1,795,271	+		Echvi_1561	0.13	-0.6
1,795,271	+		Echvi_1561	0.13	-0.9
1,795,316	+		Echvi_1561	0.17	-0.2
1,795,316	+		Echvi_1561	0.17	-2.0
1,795,326	+		Echvi_1561	0.18	+0.3
1,795,327	-		Echvi_1561	0.18	-0.4
1,795,379	+		Echvi_1561	0.23	+0.6
1,795,394	-		Echvi_1561	0.25	-0.9
1,795,402	+		Echvi_1561	0.25	+0.4
1,795,449	-		Echvi_1561	0.30	-0.8
1,795,474	+		Echvi_1561	0.32	+0.7
1,795,497	+		Echvi_1561	0.34	-0.4
1,795,497	+		Echvi_1561	0.34	+0.6
1,795,506	+		Echvi_1561	0.35	+1.5
1,795,507	-		Echvi_1561	0.35	-1.7
1,795,525	+		Echvi_1561	0.37	-0.6
1,795,526	-		Echvi_1561	0.37	-0.4
1,795,526	-		Echvi_1561	0.37	-1.4
1,795,593	+		Echvi_1561	0.43	+1.9
1,795,742	+		Echvi_1561	0.57	-0.3
1,795,815	+		Echvi_1561	0.64	+0.1
1,795,816	-		Echvi_1561	0.64	-0.3
1,795,816	-		Echvi_1561	0.64	-1.1
1,795,839	+		Echvi_1561	0.66	-0.8
1,795,849	+		Echvi_1561	0.67	-0.6
1,795,849	+		Echvi_1561	0.67	+0.8
1,795,851	+		Echvi_1561	0.68	-2.3
1,795,851	+		Echvi_1561	0.68	+1.3
1,795,852	-		Echvi_1561	0.68	-0.9
1,795,940	-		Echvi_1561	0.76	-0.8
1,795,960	-		Echvi_1561	0.78	-0.5