Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1504

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,725,849	+		Echvi_1502	0.30	-0.0
1,725,893	-		Echvi_1502	0.39	+1.3
1,725,893	-		Echvi_1502	0.39	+0.9
1,725,893	-		Echvi_1502	0.39	-0.8
1,725,917	-		Echvi_1502	0.44	-1.8
1,725,972	+		Echvi_1502	0.55	+0.9
1,726,009	-		Echvi_1502	0.62	+0.4
1,726,121	-		Echvi_1502	0.85	+0.5
1,726,125	-		Echvi_1502	0.85	-1.4
1,726,136	-		Echvi_1502	0.88	-1.7
1,726,191	+				-2.0
1,726,191	+				-0.4
1,726,192	-				+0.3
1,726,261	+				+0.5
1,726,268	+				-0.7
1,726,269	-				-0.3
1,726,269	-				-0.7
1,726,282	+				-2.4
1,726,283	-				-1.2
1,726,283	-				-1.4
1,726,368	+		Echvi_1503	0.20	+0.9
1,726,369	-		Echvi_1503	0.20	-1.3
1,726,396	-		Echvi_1503	0.25	+0.4
1,726,494	+		Echvi_1503	0.46	+0.7
1,726,494	+		Echvi_1503	0.46	-1.1
1,726,618	+		Echvi_1503	0.71	+0.9
1,726,618	+		Echvi_1503	0.71	+1.7
1,726,618	+		Echvi_1503	0.71	-1.0
1,726,618	+		Echvi_1503	0.71	-0.7
1,726,618	+		Echvi_1503	0.71	-0.7
1,726,619	-		Echvi_1503	0.72	-0.3
1,726,619	-		Echvi_1503	0.72	-0.4
1,726,743	+				+0.0
1,726,743	+				-0.7
1,726,753	+				-0.4
1,726,843	-				-0.3
1,726,870	+				+0.5
1,726,871	-				+0.1
1,726,909	+		Echvi_1504	0.10	-0.5
1,726,909	+		Echvi_1504	0.10	+0.7
1,726,909	+		Echvi_1504	0.10	-0.8
1,726,909	+		Echvi_1504	0.10	-2.2
1,726,910	-		Echvi_1504	0.10	+1.4
1,726,910	-		Echvi_1504	0.10	-2.0
1,726,910	-		Echvi_1504	0.10	-0.3
1,726,910	-		Echvi_1504	0.10	+0.1
1,726,919	+		Echvi_1504	0.11	+0.4
1,726,919	+		Echvi_1504	0.11	-0.1
1,726,919	+		Echvi_1504	0.11	-0.1
1,726,919	+		Echvi_1504	0.11	+0.4
1,726,920	-		Echvi_1504	0.11	+0.5
1,726,953	+		Echvi_1504	0.13	+0.1
1,726,953	+		Echvi_1504	0.13	-1.8
1,726,958	+		Echvi_1504	0.14	-1.8
1,726,958	+		Echvi_1504	0.14	-0.7
1,726,959	-		Echvi_1504	0.14	+0.3
1,727,134	+		Echvi_1504	0.25	-1.4
1,727,177	+		Echvi_1504	0.28	-1.7
1,727,177	+		Echvi_1504	0.28	-1.3
1,727,360	+		Echvi_1504	0.41	-2.2
1,727,687	+		Echvi_1504	0.63	+2.2
1,727,833	+		Echvi_1504	0.72	-0.1
1,727,833	+		Echvi_1504	0.72	+0.7
1,727,918	+		Echvi_1504	0.78	-0.1
1,727,918	+		Echvi_1504	0.78	+0.1
1,727,919	-		Echvi_1504	0.78	+0.7
1,727,919	-		Echvi_1504	0.78	-0.3
1,727,957	+		Echvi_1504	0.81	-1.9
1,727,957	+		Echvi_1504	0.81	-0.1
1,727,958	-		Echvi_1504	0.81	-0.1
1,728,005	+		Echvi_1504	0.84	-0.0
1,728,005	+		Echvi_1504	0.84	-0.3
1,728,007	+		Echvi_1504	0.84	+0.1
1,728,008	-		Echvi_1504	0.84	+0.3
1,728,023	+		Echvi_1504	0.85	-1.4
1,728,023	+		Echvi_1504	0.85	+0.3
1,728,023	+		Echvi_1504	0.85	-0.5
1,728,030	+		Echvi_1504	0.86	-0.1
1,728,031	-		Echvi_1504	0.86	-1.2
1,728,031	-		Echvi_1504	0.86	+0.8
1,728,031	-		Echvi_1504	0.86	-0.7
1,728,094	+				-0.1
1,728,095	-				-1.1
1,728,095	-				-0.4
1,728,095	-				-0.2
1,728,114	-				-0.8
1,728,210	-				+0.5
1,728,215	+				-2.0
1,728,216	-				+0.1
1,728,235	+				+0.3
1,728,259	+				-0.5
1,728,373	+		Echvi_1505	0.17	-0.3
1,728,373	+		Echvi_1505	0.17	+0.3
1,728,438	+		Echvi_1505	0.26	+0.8
1,728,439	-		Echvi_1505	0.26	-0.5
1,728,488	+		Echvi_1505	0.33	-1.0
1,728,495	+		Echvi_1505	0.34	+1.5
1,728,495	+		Echvi_1505	0.34	-0.4
1,728,495	+		Echvi_1505	0.34	-0.1
1,728,496	-		Echvi_1505	0.34	+0.2
1,728,496	-		Echvi_1505	0.34	+1.1
1,728,496	-		Echvi_1505	0.34	-0.7
1,728,627	-		Echvi_1505	0.53	-1.5
1,728,627	-		Echvi_1505	0.53	-1.6
1,728,635	-		Echvi_1505	0.55	+0.1
1,728,638	+		Echvi_1505	0.55	-1.2
1,728,638	+		Echvi_1505	0.55	+0.4
1,728,638	+		Echvi_1505	0.55	-0.8
1,728,638	+		Echvi_1505	0.55	-0.9
1,728,639	-		Echvi_1505	0.55	-1.0
1,728,639	-		Echvi_1505	0.55	-0.2
1,728,650	-		Echvi_1505	0.57	+0.8
1,728,683	+		Echvi_1505	0.62	-1.3
1,728,683	+		Echvi_1505	0.62	+0.6
1,728,684	-		Echvi_1505	0.62	+0.1
1,728,684	-		Echvi_1505	0.62	-0.6
1,728,684	-		Echvi_1505	0.62	-2.1
1,728,688	+		Echvi_1505	0.62	+0.5
1,728,872	-		Echvi_1505	0.89	-1.6
1,728,872	-		Echvi_1505	0.89	+0.9
1,728,961	-				-0.6