Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1500

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,721,126	+				+0.8
1,721,161	+				+0.3
1,721,161	+				-0.7
1,721,162	-				-1.0
1,721,162	-				-0.5
1,721,162	-				+0.8
1,721,162	-				-1.8
1,721,162	-				-0.7
1,721,162	-				+0.3
1,721,442	-		Echvi_1499	0.31	-0.7
1,721,463	+		Echvi_1499	0.33	+0.5
1,721,463	+		Echvi_1499	0.33	+0.6
1,721,463	+		Echvi_1499	0.33	+0.7
1,721,463	+		Echvi_1499	0.33	+0.1
1,721,464	-		Echvi_1499	0.33	-1.5
1,721,532	+		Echvi_1499	0.40	-0.4
1,721,569	-		Echvi_1499	0.44	-1.0
1,721,570	+		Echvi_1499	0.44	-0.5
1,721,571	-		Echvi_1499	0.44	-0.8
1,721,571	-		Echvi_1499	0.44	-1.9
1,721,571	-		Echvi_1499	0.44	-0.5
1,721,600	-		Echvi_1499	0.47	-0.5
1,721,603	+		Echvi_1499	0.47	-1.2
1,721,603	+		Echvi_1499	0.47	-1.3
1,721,604	-		Echvi_1499	0.47	-0.6
1,721,604	-		Echvi_1499	0.47	-0.5
1,721,604	-		Echvi_1499	0.47	-1.0
1,721,604	-		Echvi_1499	0.47	-0.9
1,721,655	+		Echvi_1499	0.52	-0.6
1,721,655	+		Echvi_1499	0.52	+1.4
1,721,655	+		Echvi_1499	0.52	-0.4
1,721,655	+		Echvi_1499	0.52	-0.3
1,721,655	+		Echvi_1499	0.52	+1.7
1,721,655	+		Echvi_1499	0.52	-0.9
1,721,656	-		Echvi_1499	0.53	+0.9
1,721,656	-		Echvi_1499	0.53	-1.6
1,721,666	+		Echvi_1499	0.54	-1.2
1,721,666	+		Echvi_1499	0.54	-2.0
1,721,667	-		Echvi_1499	0.54	-1.7
1,721,667	-		Echvi_1499	0.54	+0.9
1,721,724	+		Echvi_1499	0.60	-1.6
1,721,724	+		Echvi_1499	0.60	-1.0
1,721,733	-		Echvi_1499	0.60	+1.1
1,721,733	-		Echvi_1499	0.60	+2.7
1,721,740	-		Echvi_1499	0.61	+1.1
1,721,740	-		Echvi_1499	0.61	+0.1
1,721,768	+		Echvi_1499	0.64	+0.2
1,721,836	-		Echvi_1499	0.71	-0.1
1,721,840	+		Echvi_1499	0.71	-1.1
1,721,854	+		Echvi_1499	0.73	+2.3
1,721,890	-		Echvi_1499	0.76	+1.4
1,721,939	+		Echvi_1499	0.81	+0.3
1,721,981	+		Echvi_1499	0.86	+0.6
1,721,982	-		Echvi_1499	0.86	-0.4
1,721,991	-		Echvi_1499	0.87	+0.5
1,721,991	-		Echvi_1499	0.87	+1.7
1,722,014	+		Echvi_1499	0.89	+0.4
1,722,015	-		Echvi_1499	0.89	-0.7
1,722,037	+				+0.7
1,722,072	+				+0.1
1,722,073	-				-0.1
1,722,073	-				+0.6
1,722,074	+				+0.9
1,722,075	-				-0.4
1,722,092	+				+0.5
1,722,097	+				+0.2
1,722,097	+				-1.9
1,722,098	-				-1.0
1,722,102	-				-0.3
1,722,102	-				-0.1
1,722,121	+				+1.5
1,722,186	-				-0.3
1,722,225	-				-0.5
1,722,232	-				-0.6
1,722,234	+				-1.9
1,722,234	+				-0.6
1,722,234	+				-0.5
1,722,235	-				+1.9
1,722,235	-				-0.3
1,722,235	-				-1.9
1,722,235	-				+0.6
1,722,235	-				-1.0
1,722,261	-				-0.5
1,722,261	-				-1.1
1,722,402	-		Echvi_1500	0.11	+0.1
1,722,428	+		Echvi_1500	0.12	-0.6
1,722,428	+		Echvi_1500	0.12	-0.0
1,722,428	+		Echvi_1500	0.12	-1.2
1,722,429	-		Echvi_1500	0.12	+0.7
1,722,505	-		Echvi_1500	0.15	+1.2
1,722,707	+		Echvi_1500	0.22	-0.1
1,722,707	+		Echvi_1500	0.22	-1.1
1,722,741	-		Echvi_1500	0.23	+1.1
1,722,836	-		Echvi_1500	0.27	+0.9
1,722,845	+		Echvi_1500	0.27	+0.1
1,722,846	-		Echvi_1500	0.27	+0.9
1,722,854	-		Echvi_1500	0.28	-0.1
1,722,944	+		Echvi_1500	0.31	-3.9
1,722,945	-		Echvi_1500	0.31	+0.7
1,722,945	-		Echvi_1500	0.31	-0.3
1,722,945	-		Echvi_1500	0.31	-0.6
1,722,973	+		Echvi_1500	0.32	-0.3
1,722,973	+		Echvi_1500	0.32	-1.1
1,722,974	-		Echvi_1500	0.32	+0.0
1,723,046	-		Echvi_1500	0.35	-1.2
1,723,084	-		Echvi_1500	0.36	+0.3
1,723,084	-		Echvi_1500	0.36	+0.4
1,723,084	-		Echvi_1500	0.36	-0.4
1,723,086	-		Echvi_1500	0.36	+1.2
1,723,121	+		Echvi_1500	0.37	-0.2
1,723,130	+		Echvi_1500	0.38	-2.3
1,723,195	+		Echvi_1500	0.40	-0.1
1,723,196	-		Echvi_1500	0.40	-0.2
1,723,196	-		Echvi_1500	0.40	-0.6
1,723,235	-		Echvi_1500	0.42	+0.7
1,723,345	+		Echvi_1500	0.46	+0.2
1,723,397	+		Echvi_1500	0.48	+0.1
1,723,438	+		Echvi_1500	0.49	+0.2
1,723,438	+		Echvi_1500	0.49	-0.1
1,723,442	+		Echvi_1500	0.49	-0.6
1,723,443	-		Echvi_1500	0.49	-0.8
1,723,444	+		Echvi_1500	0.49	-0.6
1,723,644	-		Echvi_1500	0.57	+1.3
1,723,707	-		Echvi_1500	0.59	+0.2
1,723,708	+		Echvi_1500	0.59	-1.1
1,723,709	-		Echvi_1500	0.59	+0.3
1,723,761	-		Echvi_1500	0.61	+0.9
1,723,761	-		Echvi_1500	0.61	+0.2
1,723,761	-		Echvi_1500	0.61	-2.6
1,723,841	+		Echvi_1500	0.64	+0.9
1,723,845	+		Echvi_1500	0.64	+0.9
1,723,846	-		Echvi_1500	0.64	-1.4
1,723,867	+		Echvi_1500	0.65	+0.3
1,723,892	+		Echvi_1500	0.66	-0.4
1,723,930	-		Echvi_1500	0.67	-2.0
1,723,938	-		Echvi_1500	0.68	+0.9
1,724,105	+		Echvi_1500	0.74	+0.3
1,724,126	-		Echvi_1500	0.75	+1.4
1,724,200	+		Echvi_1500	0.77	+0.2
1,724,201	-		Echvi_1500	0.78	-0.4
1,724,201	-		Echvi_1500	0.78	-0.4
1,724,201	-		Echvi_1500	0.78	-0.6
1,724,290	+		Echvi_1500	0.81	-1.4
1,724,290	+		Echvi_1500	0.81	+0.6
1,724,316	-		Echvi_1500	0.82	-0.2
1,724,316	-		Echvi_1500	0.82	+0.4
1,724,317	+		Echvi_1500	0.82	-1.2
1,724,317	+		Echvi_1500	0.82	+1.1
1,724,317	+		Echvi_1500	0.82	+1.3
1,724,317	+		Echvi_1500	0.82	-1.4
1,724,317	+		Echvi_1500	0.82	+0.8
1,724,317	+		Echvi_1500	0.82	+0.2
1,724,318	-		Echvi_1500	0.82	-1.3
1,724,318	-		Echvi_1500	0.82	-1.1
1,724,318	-		Echvi_1500	0.82	-1.0
1,724,318	-		Echvi_1500	0.82	-0.6
1,724,318	-		Echvi_1500	0.82	-2.5
1,724,318	-		Echvi_1500	0.82	+0.6
1,724,361	-		Echvi_1500	0.83	-0.3
1,724,361	-		Echvi_1500	0.83	+2.2
1,724,395	+		Echvi_1500	0.85	+0.1
1,724,395	+		Echvi_1500	0.85	+0.4
1,724,395	+		Echvi_1500	0.85	+0.3
1,724,395	+		Echvi_1500	0.85	-0.1
1,724,395	+		Echvi_1500	0.85	-0.6
1,724,396	-		Echvi_1500	0.85	-0.3
1,724,396	-		Echvi_1500	0.85	+0.3
1,724,399	+		Echvi_1500	0.85	-0.9
1,724,400	-		Echvi_1500	0.85	-0.8
1,724,400	-		Echvi_1500	0.85	+0.4
1,724,401	+		Echvi_1500	0.85	+0.3
1,724,408	+		Echvi_1500	0.85	-0.9
1,724,453	-		Echvi_1500	0.87	-0.5
1,724,515	+		Echvi_1500	0.89	-0.4
1,724,519	-		Echvi_1500	0.89	+0.9
1,724,519	-		Echvi_1500	0.89	-0.8
1,724,589	-				+0.2
1,724,639	-				+1.4
1,724,676	-				-0.3
1,724,702	+				+0.1
1,724,702	+				-0.4
1,724,702	+				-1.2
1,724,702	+				+0.5
1,724,702	+				+0.2
1,724,702	+				+1.4
1,724,703	-				-0.1
1,724,711	+				-1.0
1,724,712	-				+0.3
1,724,732	+				-0.3
1,724,732	+				-0.5
1,724,733	-				+0.4
1,724,733	-				+0.9
1,724,733	-				+0.0
1,724,754	+				-0.1
1,724,755	-				-1.2
1,724,764	+				-1.1
1,724,765	-				-0.5
1,724,829	+				-0.1
1,724,835	+				-0.3
1,724,835	+				-0.8
1,724,835	+				-1.5
1,724,836	-				+0.0
1,724,836	-				+0.2
1,724,836	-				-0.5
1,724,891	-				-0.4
1,724,912	+				+0.3
1,724,918	+				-0.8
1,724,935	-				+0.6
1,724,952	+				-2.1
1,724,953	-				-2.3
1,724,975	+				-0.9
1,724,975	+				-1.9
1,724,998	+				-0.2
1,724,998	+				+1.2
1,724,999	-				-0.6
1,725,004	+				+0.7
1,725,005	-				-0.1
1,725,005	-				+0.4
1,725,019	+				-1.2
1,725,080	+		Echvi_1501	0.12	-1.1
1,725,080	+		Echvi_1501	0.12	-0.7
1,725,080	+		Echvi_1501	0.12	+0.1
1,725,081	-		Echvi_1501	0.12	-0.1
1,725,081	-		Echvi_1501	0.12	-1.1
1,725,081	-		Echvi_1501	0.12	+0.2
1,725,081	-		Echvi_1501	0.12	-0.9
1,725,148	+		Echvi_1501	0.23	+0.3
1,725,149	-		Echvi_1501	0.23	-1.3
1,725,174	+		Echvi_1501	0.27	+0.5
1,725,174	+		Echvi_1501	0.27	-0.4
1,725,175	-		Echvi_1501	0.28	-1.1
1,725,175	-		Echvi_1501	0.28	-0.1
1,725,304	-		Echvi_1501	0.48	+0.9
1,725,310	-		Echvi_1501	0.49	-0.5
1,725,310	-		Echvi_1501	0.49	-0.4
1,725,314	+		Echvi_1501	0.50	+0.3
1,725,315	-		Echvi_1501	0.50	-0.5
1,725,315	-		Echvi_1501	0.50	-0.8
1,725,315	-		Echvi_1501	0.50	+0.6
1,725,315	-		Echvi_1501	0.50	-0.6
1,725,316	+		Echvi_1501	0.50	-0.1
1,725,316	+		Echvi_1501	0.50	+0.1
1,725,393	+		Echvi_1501	0.63	-0.4
1,725,490	+		Echvi_1501	0.78	+0.9
1,725,491	-		Echvi_1501	0.79	+0.0
1,725,519	+		Echvi_1501	0.83	+2.7
1,725,521	+		Echvi_1501	0.83	-0.6
1,725,521	+		Echvi_1501	0.83	+0.0
1,725,521	+		Echvi_1501	0.83	-0.1
1,725,521	+		Echvi_1501	0.83	-2.0
1,725,522	-		Echvi_1501	0.84	-2.2
1,725,527	+		Echvi_1501	0.84	+0.6
1,725,527	+		Echvi_1501	0.84	+2.0
1,725,528	-		Echvi_1501	0.85	-0.3
1,725,528	-		Echvi_1501	0.85	+0.4
1,725,529	+		Echvi_1501	0.85	+0.2
1,725,543	+		Echvi_1501	0.87	-0.8
1,725,559	+		Echvi_1501	0.90	-2.7
1,725,559	+		Echvi_1501	0.90	+1.1
1,725,560	-		Echvi_1501	0.90	+1.4
1,725,565	-				-0.9
1,725,588	-				-0.2
1,725,617	-				+0.6
1,725,677	+				+1.3
1,725,683	+				-1.3