Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1492

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,710,674	+		Echvi_1490	0.79	+0.4
1,710,754	-		Echvi_1490	0.83	+0.9
1,710,842	-		Echvi_1490	0.86	+0.1
1,710,896	+		Echvi_1490	0.88	+0.4
1,710,983	+				+1.1
1,710,984	-				-0.8
1,710,984	-				-0.6
1,711,011	+				-0.6
1,711,072	-				-0.5
1,711,072	-				+0.7
1,711,074	-				-0.6
1,711,097	-				-0.5
1,711,178	+				-0.8
1,711,179	-				+1.1
1,711,179	-				+0.4
1,711,358	+		Echvi_1491	0.40	+0.3
1,711,397	-		Echvi_1491	0.51	-2.1
1,711,449	+		Echvi_1491	0.67	+0.7
1,711,460	+		Echvi_1491	0.70	+1.5
1,711,463	-		Echvi_1491	0.71	+0.7
1,711,563	-				+0.1
1,711,570	-				-0.8
1,711,709	+		Echvi_1492	0.20	+0.3
1,711,821	-		Echvi_1492	0.52	-2.2
1,711,822	+		Echvi_1492	0.52	-1.0
1,711,822	+		Echvi_1492	0.52	-0.9
1,711,892	+		Echvi_1492	0.72	-1.2
1,711,988	+				+0.9
1,712,013	+				-0.1
1,712,014	-				-1.6
1,712,072	+				-0.3
1,712,072	+				+0.7
1,712,072	+				-0.2
1,712,073	-				-0.5
1,712,073	-				+0.4
1,712,073	-				-0.1
1,712,078	+				+0.1
1,712,079	-				-0.7
1,712,079	-				+0.1
1,712,079	-				-2.3
1,712,099	+				-0.6
1,712,099	+				+0.8
1,712,101	+				-0.9
1,712,101	+				-1.1
1,712,111	-				-0.4
1,712,147	+				-0.4
1,712,157	-				-0.1
1,712,293	+				-0.4
1,712,294	-				-0.5
1,712,387	+				+0.8
1,712,559	+		Echvi_1493	0.63	-0.6
1,712,561	+		Echvi_1493	0.65	+0.0
1,712,561	+		Echvi_1493	0.65	-2.0
1,712,561	+		Echvi_1493	0.65	-0.5
1,712,628	-				+0.5
1,712,672	-				-0.5
1,712,672	-				+0.8
1,712,691	-				+1.7
1,712,693	-				-1.1
1,712,724	+				-0.0
1,712,724	+				+1.1
1,712,759	+				-1.9
1,712,880	+				-0.4
1,712,881	-				+0.8
1,712,882	+				+1.3
1,712,892	+				+0.9
1,712,892	+				+0.5
1,712,892	+				+0.9
1,712,892	+				+2.4
1,712,892	+				-0.4
1,712,892	+				+0.9
1,712,892	+				+0.6
1,712,893	-				-0.1
1,712,893	-				-0.5
1,712,893	-				-1.2
1,712,893	-				+0.1
1,712,893	-				-1.3
1,712,893	-				-0.5
1,712,893	-				+0.2
1,712,893	-				+0.3
1,712,893	-				-0.5
1,712,900	+				+1.2
1,712,900	+				+0.5
1,712,900	+				+0.9
1,712,900	+				-2.3
1,712,900	+				-0.8
1,712,900	+				-0.5
1,712,901	-				+0.4
1,712,901	-				-1.0
1,712,901	-				+1.5
1,712,901	-				-0.6
1,712,914	+				-0.3
1,712,915	-				-0.7
1,712,944	-				+0.7