Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1489

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,706,529	+				-1.1
1,706,571	+				+0.3
1,706,571	+				-1.3
1,706,654	+				-0.2
1,706,697	-		Echvi_1488	0.15	-0.1
1,706,697	-		Echvi_1488	0.15	-0.8
1,706,743	+		Echvi_1488	0.22	+0.2
1,706,866	+		Echvi_1488	0.41	-0.7
1,706,867	-		Echvi_1488	0.41	-2.9
1,706,867	-		Echvi_1488	0.41	+1.4
1,706,867	-		Echvi_1488	0.41	-0.1
1,706,867	-		Echvi_1488	0.41	-1.1
1,706,923	-		Echvi_1488	0.49	-1.0
1,706,931	-		Echvi_1488	0.50	-0.6
1,706,952	+		Echvi_1488	0.54	-0.2
1,706,952	+		Echvi_1488	0.54	-0.3
1,706,953	-		Echvi_1488	0.54	-0.2
1,706,953	-		Echvi_1488	0.54	+0.9
1,706,953	-		Echvi_1488	0.54	-0.3
1,706,953	-		Echvi_1488	0.54	+0.1
1,707,030	-		Echvi_1488	0.65	+1.7
1,707,036	+		Echvi_1488	0.66	+0.9
1,707,048	+		Echvi_1488	0.68	-0.6
1,707,048	+		Echvi_1488	0.68	+0.7
1,707,065	-		Echvi_1488	0.71	-0.7
1,707,093	+		Echvi_1488	0.75	+0.1
1,707,128	+		Echvi_1488	0.80	+1.0
1,707,162	+		Echvi_1488	0.85	+0.7
1,707,231	+				-0.4
1,707,235	-				+1.1
1,707,236	+				-1.4
1,707,236	+				-1.7
1,707,265	+				-0.1
1,707,266	-				-1.6
1,707,266	-				-1.0
1,707,268	+				-1.5
1,707,268	+				+0.2
1,707,268	+				-1.3
1,707,269	-				-0.8
1,707,269	-				-0.5
1,707,270	+				-0.2
1,707,270	+				-0.2
1,707,271	-				+2.4
1,707,271	-				+0.6
1,707,271	-				+1.7
1,707,349	-				-0.9
1,707,351	-				+0.4
1,707,388	+				-1.6
1,707,389	-				-0.3
1,707,389	-				-1.1
1,707,458	-				+0.3
1,707,473	+				-1.3
1,707,473	+				+0.3
1,707,473	+				+0.5
1,707,473	+				-0.3
1,707,474	-				-1.7
1,707,474	-				+0.3
1,707,477	-				+0.7
1,707,505	+				+0.5
1,707,506	-				-1.2
1,707,509	+				-0.9
1,707,509	+				+0.5
1,707,509	+				-1.3
1,707,510	-				+0.9
1,707,570	-				-0.6
1,707,570	-				+1.0
1,707,570	-				+0.5
1,707,570	-				+0.6
1,707,578	+				+0.4
1,707,578	+				-0.1
1,707,590	-				-0.9
1,707,642	+		Echvi_1489	0.12	+0.0
1,707,773	+		Echvi_1489	0.24	-0.3
1,707,796	+		Echvi_1489	0.26	-0.4
1,707,796	+		Echvi_1489	0.26	-0.8
1,707,797	-		Echvi_1489	0.26	+1.2
1,707,797	-		Echvi_1489	0.26	+0.7
1,707,797	-		Echvi_1489	0.26	+0.8
1,707,806	-		Echvi_1489	0.27	+0.5
1,707,821	+		Echvi_1489	0.28	-0.7
1,707,821	+		Echvi_1489	0.28	-0.4
1,707,899	+		Echvi_1489	0.35	-0.3
1,707,900	-		Echvi_1489	0.35	-0.6
1,707,923	+		Echvi_1489	0.37	-0.8
1,707,923	+		Echvi_1489	0.37	-0.7
1,707,924	-		Echvi_1489	0.37	-0.0
1,707,924	-		Echvi_1489	0.37	+0.3
1,707,924	-		Echvi_1489	0.37	+1.7
1,708,046	+		Echvi_1489	0.48	-0.2
1,708,047	-		Echvi_1489	0.49	-0.7
1,708,131	-		Echvi_1489	0.56	-0.3
1,708,178	+		Echvi_1489	0.60	-0.5
1,708,290	+		Echvi_1489	0.70	-0.3
1,708,291	-		Echvi_1489	0.71	+0.0
1,708,291	-		Echvi_1489	0.71	-1.7
1,708,308	+		Echvi_1489	0.72	-0.9
1,708,371	-		Echvi_1489	0.78	-0.6
1,708,421	+		Echvi_1489	0.82	+0.1
1,708,487	+		Echvi_1489	0.88	-2.7
1,708,487	+		Echvi_1489	0.88	+0.3
1,708,530	+				-0.3
1,708,531	-				-0.8
1,708,578	-				+2.2
1,708,578	-				-0.7
1,708,648	+				+0.5
1,708,648	+				+1.0
1,708,648	+				+0.2
1,708,651	-				-0.5
1,708,651	-				-1.6
1,708,651	-				+0.1
1,708,651	-				+0.1
1,708,722	+				-0.2
1,708,723	-				+0.7
1,708,732	-				+0.4
1,708,811	+				-1.9
1,708,830	+				+1.3
1,708,830	+				-1.4
1,708,831	-				-0.3
1,708,831	-				+0.9
1,708,894	+				+0.3
1,708,894	+				+0.7
1,708,931	+				+0.7
1,708,934	-				-0.5
1,709,038	+		Echvi_1490	0.13	+1.4
1,709,050	+		Echvi_1490	0.13	+0.8
1,709,050	+		Echvi_1490	0.13	-1.1
1,709,050	+		Echvi_1490	0.13	+0.1
1,709,050	+		Echvi_1490	0.13	+0.6
1,709,228	+		Echvi_1490	0.21	+0.0
1,709,255	+		Echvi_1490	0.22	-0.7
1,709,255	+		Echvi_1490	0.22	+0.1
1,709,256	-		Echvi_1490	0.22	+0.3
1,709,343	+		Echvi_1490	0.25	+1.7
1,709,343	+		Echvi_1490	0.25	-0.9
1,709,344	-		Echvi_1490	0.25	+0.1
1,709,344	-		Echvi_1490	0.25	+1.7
1,709,345	+		Echvi_1490	0.25	+0.0
1,709,345	+		Echvi_1490	0.25	+0.6
1,709,345	+		Echvi_1490	0.25	+0.1
1,709,345	+		Echvi_1490	0.25	-0.2
1,709,345	+		Echvi_1490	0.25	-0.7
1,709,346	-		Echvi_1490	0.25	+0.9
1,709,346	-		Echvi_1490	0.25	+0.1
1,709,346	-		Echvi_1490	0.25	-0.7
1,709,346	-		Echvi_1490	0.25	+0.4
1,709,346	-		Echvi_1490	0.25	-0.9
1,709,453	+		Echvi_1490	0.30	+0.7
1,709,453	+		Echvi_1490	0.30	+0.1
1,709,453	+		Echvi_1490	0.30	+0.2
1,709,485	-		Echvi_1490	0.31	-2.0
1,709,515	+		Echvi_1490	0.32	-0.5
1,709,516	-		Echvi_1490	0.32	-0.4
1,709,517	+		Echvi_1490	0.32	-0.4
1,709,539	-		Echvi_1490	0.33	-0.6
1,709,539	-		Echvi_1490	0.33	-0.8