Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1381

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,592,395	-		Echvi_1380	0.16	+0.7
1,592,418	-		Echvi_1380	0.18	+0.3
1,592,418	-		Echvi_1380	0.18	-0.6
1,592,453	-		Echvi_1380	0.21	+0.5
1,592,472	+		Echvi_1380	0.23	+0.9
1,592,472	+		Echvi_1380	0.23	-0.9
1,592,472	+		Echvi_1380	0.23	+0.1
1,592,473	-		Echvi_1380	0.23	-0.8
1,592,477	-		Echvi_1380	0.24	+0.6
1,592,640	+		Echvi_1380	0.39	+1.0
1,592,641	-		Echvi_1380	0.39	+0.2
1,592,699	-		Echvi_1380	0.45	-1.3
1,592,702	-		Echvi_1380	0.45	-0.1
1,592,702	-		Echvi_1380	0.45	+0.8
1,592,864	-		Echvi_1380	0.61	+0.6
1,592,970	-		Echvi_1380	0.71	+0.6
1,592,972	+		Echvi_1380	0.71	-1.1
1,593,022	+		Echvi_1380	0.76	-0.3
1,593,023	-		Echvi_1380	0.76	+0.8
1,593,038	-		Echvi_1380	0.78	-0.1
1,593,073	+		Echvi_1380	0.81	-1.3
1,593,073	+		Echvi_1380	0.81	-0.2
1,593,073	+		Echvi_1380	0.81	+0.2
1,593,073	+		Echvi_1380	0.81	-0.1
1,593,073	+		Echvi_1380	0.81	+0.1
1,593,074	-		Echvi_1380	0.81	+0.7
1,593,074	-		Echvi_1380	0.81	+0.2
1,593,074	-		Echvi_1380	0.81	+0.5
1,593,074	-		Echvi_1380	0.81	+0.5
1,593,074	-		Echvi_1380	0.81	+0.1
1,593,078	+		Echvi_1380	0.81	-0.7
1,593,078	+		Echvi_1380	0.81	+0.8
1,593,078	+		Echvi_1380	0.81	-1.0
1,593,079	-		Echvi_1380	0.81	+1.0
1,593,079	-		Echvi_1380	0.81	-0.4
1,593,079	-		Echvi_1380	0.81	+0.5
1,593,086	+		Echvi_1380	0.82	-0.2
1,593,182	+				-2.0
1,593,183	-				+1.9
1,593,183	-				+1.0
1,593,235	-				-1.0
1,593,303	+				-0.5
1,593,303	+				-0.8
1,593,331	-				-0.2
1,593,331	-				-0.9
1,593,334	-				-0.1
1,593,334	-				+0.7
1,593,334	-				-0.9
1,593,348	+				-0.7
1,593,366	+				+0.0
1,593,402	+				-2.2
1,593,402	+				+1.7
1,593,402	+				-1.4
1,593,403	-				+0.2
1,593,470	-		Echvi_1381	0.17	-1.0
1,593,536	+		Echvi_1381	0.28	-0.8
1,593,536	+		Echvi_1381	0.28	+1.9
1,593,537	-		Echvi_1381	0.29	-0.2
1,593,537	-		Echvi_1381	0.29	+0.2
1,593,537	-		Echvi_1381	0.29	+0.7
1,593,537	-		Echvi_1381	0.29	+0.7
1,593,537	-		Echvi_1381	0.29	-0.1
1,593,625	+		Echvi_1381	0.43	+0.5
1,593,625	+		Echvi_1381	0.43	-0.5
1,593,626	-		Echvi_1381	0.43	-0.5
1,593,626	-		Echvi_1381	0.43	+0.0
1,593,626	-		Echvi_1381	0.43	+0.8
1,593,649	-		Echvi_1381	0.47	-0.1
1,593,661	+		Echvi_1381	0.49	+0.1
1,593,662	-		Echvi_1381	0.49	+1.3
1,593,662	-		Echvi_1381	0.49	+0.2
1,593,666	-		Echvi_1381	0.50	+0.6
1,593,801	-		Echvi_1381	0.73	+0.2
1,593,819	-		Echvi_1381	0.76	-0.2
1,593,862	-		Echvi_1381	0.83	+0.2
1,593,862	-		Echvi_1381	0.83	-0.5
1,593,862	-		Echvi_1381	0.83	-0.7
1,593,869	+		Echvi_1381	0.84	+0.2
1,593,869	+		Echvi_1381	0.84	+0.4
1,593,919	+				-0.4
1,593,940	+				+0.7
1,593,940	+				-1.1
1,593,941	-				-0.9
1,593,947	-				-0.5
1,593,947	-				-2.4
1,593,947	-				-2.0
1,593,953	-				+0.4
1,593,967	-				-0.7
1,593,967	-				-0.5
1,593,967	-				+1.0
1,593,970	-				-0.9
1,593,972	+				+0.8
1,593,973	-				+0.2
1,593,998	-				-0.4
1,594,001	+				+0.7
1,594,002	-				-0.4
1,594,002	-				-0.5
1,594,002	-				-0.7
1,594,008	-				+0.8
1,594,008	-				+0.3
1,594,022	+				-0.3
1,594,022	+				-1.1
1,594,023	-				-0.8
1,594,023	-				+1.7
1,594,026	+				-1.8
1,594,026	+				+1.4
1,594,026	+				+0.1
1,594,027	-				+0.9
1,594,027	-				+0.7
1,594,027	-				-0.8
1,594,031	+				-1.2
1,594,032	-				-1.0
1,594,032	-				-0.4
1,594,034	+				-1.6
1,594,034	+				-3.1
1,594,168	+				-0.2
1,594,168	+				-0.5
1,594,172	+				-0.5
1,594,180	+				-0.9
1,594,181	-				-0.5
1,594,181	-				+0.6
1,594,270	+		Echvi_1382	0.10	-0.7
1,594,292	+		Echvi_1382	0.12	+1.7
1,594,292	+		Echvi_1382	0.12	-1.7
1,594,313	-		Echvi_1382	0.14	+0.7
1,594,316	+		Echvi_1382	0.14	+0.5
1,594,317	-		Echvi_1382	0.14	+0.1
1,594,317	-		Echvi_1382	0.14	-1.4
1,594,354	+		Echvi_1382	0.17	-0.3
1,594,359	-		Echvi_1382	0.17	+0.8
1,594,359	-		Echvi_1382	0.17	-1.1
1,594,359	-		Echvi_1382	0.17	+0.2
1,594,365	+		Echvi_1382	0.18	-1.3
1,594,366	-		Echvi_1382	0.18	-1.9
1,594,366	-		Echvi_1382	0.18	-0.3
1,594,369	+		Echvi_1382	0.18	-0.4
1,594,369	+		Echvi_1382	0.18	-0.3
1,594,369	+		Echvi_1382	0.18	+0.2
1,594,370	-		Echvi_1382	0.18	-1.0
1,594,370	-		Echvi_1382	0.18	+0.1
1,594,370	-		Echvi_1382	0.18	+0.5
1,594,372	-		Echvi_1382	0.18	-1.5
1,594,377	+		Echvi_1382	0.19	+0.8
1,594,378	-		Echvi_1382	0.19	-0.7
1,594,396	+		Echvi_1382	0.20	+0.6
1,594,408	-		Echvi_1382	0.21	-0.5
1,594,430	+		Echvi_1382	0.23	+0.1
1,594,430	+		Echvi_1382	0.23	+0.1
1,594,430	+		Echvi_1382	0.23	+1.7
1,594,430	+		Echvi_1382	0.23	-1.1
1,594,431	-		Echvi_1382	0.23	-1.6
1,594,437	-		Echvi_1382	0.23	-1.2
1,594,437	-		Echvi_1382	0.23	-0.3
1,594,524	+		Echvi_1382	0.30	-0.9
1,594,524	+		Echvi_1382	0.30	-0.1
1,594,524	+		Echvi_1382	0.30	+0.9
1,594,524	+		Echvi_1382	0.30	-1.7
1,594,524	+		Echvi_1382	0.30	-1.0
1,594,525	-		Echvi_1382	0.30	+1.1
1,594,525	-		Echvi_1382	0.30	+0.0
1,594,525	-		Echvi_1382	0.30	-0.4
1,594,525	-		Echvi_1382	0.30	+1.2
1,594,532	+		Echvi_1382	0.31	+0.9
1,594,539	-		Echvi_1382	0.31	+0.1
1,594,557	+		Echvi_1382	0.33	-0.4
1,594,557	+		Echvi_1382	0.33	-0.2
1,594,558	-		Echvi_1382	0.33	+0.7
1,594,558	-		Echvi_1382	0.33	-1.2
1,594,655	+		Echvi_1382	0.40	+1.0
1,594,655	+		Echvi_1382	0.40	-0.9
1,594,679	-		Echvi_1382	0.42	+0.3
1,594,679	-		Echvi_1382	0.42	-1.2
1,594,679	-		Echvi_1382	0.42	+0.8
1,594,684	+		Echvi_1382	0.43	-0.4
1,594,703	+		Echvi_1382	0.44	+1.3
1,594,703	+		Echvi_1382	0.44	-2.0
1,594,704	-		Echvi_1382	0.44	-1.5
1,594,757	+		Echvi_1382	0.48	+0.3
1,594,757	+		Echvi_1382	0.48	-0.8
1,594,758	-		Echvi_1382	0.48	-0.9
1,594,758	-		Echvi_1382	0.48	-0.0
1,594,758	-		Echvi_1382	0.48	-0.1
1,594,758	-		Echvi_1382	0.48	-1.5
1,594,758	-		Echvi_1382	0.48	+0.3
1,594,759	+		Echvi_1382	0.48	-1.1
1,594,759	+		Echvi_1382	0.48	+0.5
1,594,760	-		Echvi_1382	0.48	+1.7
1,594,760	-		Echvi_1382	0.48	+0.0
1,594,760	-		Echvi_1382	0.48	+1.9
1,594,760	-		Echvi_1382	0.48	-1.9
1,594,766	+		Echvi_1382	0.49	-0.5
1,594,766	+		Echvi_1382	0.49	-1.3
1,594,767	-		Echvi_1382	0.49	+0.2
1,594,780	-		Echvi_1382	0.50	+0.5
1,594,789	+		Echvi_1382	0.51	+4.0
1,594,789	+		Echvi_1382	0.51	-1.3
1,594,792	+		Echvi_1382	0.51	-1.8
1,594,793	-		Echvi_1382	0.51	+0.4
1,594,795	+		Echvi_1382	0.51	-1.2
1,594,799	+		Echvi_1382	0.52	-0.5
1,594,799	+		Echvi_1382	0.52	-0.8
1,594,800	-		Echvi_1382	0.52	-1.1
1,594,800	-		Echvi_1382	0.52	-1.2
1,594,924	+		Echvi_1382	0.61	-2.0
1,594,927	-		Echvi_1382	0.61	+0.5
1,594,927	-		Echvi_1382	0.61	+1.0