Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1349

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,554,645	+		Echvi_1348	0.56	-0.3
1,554,667	+		Echvi_1348	0.58	+1.9
1,554,671	+		Echvi_1348	0.58	+0.6
1,554,816	+		Echvi_1348	0.72	-0.1
1,554,839	+		Echvi_1348	0.74	+1.4
1,554,946	+		Echvi_1348	0.84	+0.5
1,554,970	+		Echvi_1348	0.86	+1.0
1,554,972	+		Echvi_1348	0.87	-0.1
1,555,014	+				+0.2
1,555,015	-				+1.6
1,555,128	+				+0.6
1,555,227	+				-0.0
1,555,227	+				+1.0
1,555,282	+				+1.1
1,555,416	+				-1.7
1,555,416	+				+0.8
1,555,455	+				-0.4
1,555,482	+				-0.4
1,555,484	+				+0.6
1,555,485	-				-0.4
1,555,485	-				+0.8
1,555,560	-				+1.1
1,555,584	+				-0.6
1,555,604	+				+0.1
1,555,615	+				-2.6
1,555,636	+				-2.2
1,555,675	+		Echvi_1349	0.12	-1.7
1,555,683	-		Echvi_1349	0.13	+0.7
1,555,694	+		Echvi_1349	0.15	-2.4
1,555,694	+		Echvi_1349	0.15	-1.9
1,555,696	+		Echvi_1349	0.15	-1.5
1,555,697	-		Echvi_1349	0.15	+0.1
1,555,712	+		Echvi_1349	0.17	-1.3
1,555,754	+		Echvi_1349	0.23	-0.6
1,555,757	+		Echvi_1349	0.23	-0.5
1,555,785	-		Echvi_1349	0.27	-2.1
1,555,807	+		Echvi_1349	0.30	-0.9
1,555,807	+		Echvi_1349	0.30	-1.3
1,555,813	+		Echvi_1349	0.31	+2.1
1,555,814	-		Echvi_1349	0.31	-1.3
1,555,814	-		Echvi_1349	0.31	-0.9
1,555,814	-		Echvi_1349	0.31	+0.3
1,555,823	-		Echvi_1349	0.32	-1.7
1,555,853	+		Echvi_1349	0.36	-1.1
1,555,853	+		Echvi_1349	0.36	-1.3
1,555,854	-		Echvi_1349	0.36	-0.1
1,555,895	-		Echvi_1349	0.42	-1.7
1,555,919	+		Echvi_1349	0.45	-3.4
1,555,928	+		Echvi_1349	0.46	-1.9
1,555,959	-		Echvi_1349	0.50	-2.4
1,555,964	+		Echvi_1349	0.51	-0.2
1,555,992	-		Echvi_1349	0.55	+0.6
1,555,992	-		Echvi_1349	0.55	-1.2
1,556,054	-		Echvi_1349	0.63	+1.3
1,556,054	-		Echvi_1349	0.63	-0.9
1,556,056	+		Echvi_1349	0.63	-1.3
1,556,057	-		Echvi_1349	0.63	-0.8
1,556,064	-		Echvi_1349	0.64	-3.1
1,556,070	-		Echvi_1349	0.65	-0.9
1,556,070	-		Echvi_1349	0.65	-0.4
1,556,082	+		Echvi_1349	0.67	-1.2
1,556,082	+		Echvi_1349	0.67	-1.4
1,556,118	-		Echvi_1349	0.71	+0.2
1,556,224	+		Echvi_1349	0.85	-0.2
1,556,224	+		Echvi_1349	0.85	-0.7
1,556,225	-		Echvi_1349	0.86	-0.0
1,556,238	-		Echvi_1349	0.87	-0.5
1,556,273	+				+2.6
1,556,273	+				-2.7
1,556,327	+				-0.7
1,556,327	+				-1.2
1,556,328	-				+0.7
1,556,328	-				-0.2
1,556,338	+				+0.6
1,556,338	+				+2.4
1,556,343	-				+0.4
1,556,346	-				+1.1
1,556,377	+				+0.8
1,556,378	-				+1.1
1,556,385	+				+1.1
1,556,386	-				+0.2
1,556,389	+				+0.2
1,556,389	+				+2.1
1,556,437	-				+1.1
1,556,437	-				-0.7
1,556,453	+				-0.7
1,556,454	-				+1.6
1,556,454	-				-0.1
1,556,498	+		Echvi_1350	0.12	-0.4
1,556,499	-		Echvi_1350	0.12	+1.4
1,556,551	+		Echvi_1350	0.16	+0.1
1,556,558	-		Echvi_1350	0.16	-1.5
1,556,558	-		Echvi_1350	0.16	-0.2
1,556,560	+		Echvi_1350	0.17	-2.4
1,556,561	-		Echvi_1350	0.17	+1.4
1,556,564	+		Echvi_1350	0.17	+0.0
1,556,565	-		Echvi_1350	0.17	-0.8
1,556,667	+		Echvi_1350	0.25	-0.1
1,556,709	-		Echvi_1350	0.28	+0.2
1,556,709	-		Echvi_1350	0.28	+1.0
1,556,709	-		Echvi_1350	0.28	+0.2
1,556,722	-		Echvi_1350	0.29	+0.2
1,556,741	+		Echvi_1350	0.30	-1.8
1,556,741	+		Echvi_1350	0.30	+0.1
1,556,748	+		Echvi_1350	0.31	+1.1
1,556,749	-		Echvi_1350	0.31	+1.1
1,556,765	+		Echvi_1350	0.32	-1.5
1,556,765	+		Echvi_1350	0.32	-0.1
1,556,765	+		Echvi_1350	0.32	-1.1
1,556,766	-		Echvi_1350	0.32	-0.2
1,556,766	-		Echvi_1350	0.32	+0.5
1,556,766	-		Echvi_1350	0.32	+0.6
1,556,771	-		Echvi_1350	0.32	-0.1
1,556,783	+		Echvi_1350	0.33	+0.6
1,556,861	+		Echvi_1350	0.39	+0.1
1,556,902	-		Echvi_1350	0.42	-0.5
1,556,902	-		Echvi_1350	0.42	+1.6
1,556,902	-		Echvi_1350	0.42	-0.7
1,556,927	+		Echvi_1350	0.44	-0.1
1,556,930	-		Echvi_1350	0.44	-0.5
1,556,939	+		Echvi_1350	0.45	+0.1
1,556,966	+		Echvi_1350	0.47	-0.5
1,556,967	-		Echvi_1350	0.47	-0.1
1,556,967	-		Echvi_1350	0.47	+0.2
1,556,967	-		Echvi_1350	0.47	-3.2
1,556,979	+		Echvi_1350	0.48	+0.3
1,556,980	-		Echvi_1350	0.48	+1.1
1,556,982	-		Echvi_1350	0.48	-0.3
1,557,022	+		Echvi_1350	0.51	+2.2
1,557,033	+		Echvi_1350	0.52	-0.4
1,557,033	+		Echvi_1350	0.52	-1.5
1,557,039	+		Echvi_1350	0.52	+0.4
1,557,053	+		Echvi_1350	0.53	-1.1
1,557,053	+		Echvi_1350	0.53	-0.7
1,557,083	+		Echvi_1350	0.56	-2.1
1,557,084	-		Echvi_1350	0.56	-0.1
1,557,125	+		Echvi_1350	0.59	-0.5
1,557,125	+		Echvi_1350	0.59	-0.9
1,557,126	-		Echvi_1350	0.59	-0.7
1,557,146	+		Echvi_1350	0.60	-0.4
1,557,146	+		Echvi_1350	0.60	-0.9
1,557,146	+		Echvi_1350	0.60	-1.8
1,557,146	+		Echvi_1350	0.60	-1.6
1,557,147	-		Echvi_1350	0.60	-0.8
1,557,147	-		Echvi_1350	0.60	-0.7
1,557,147	-		Echvi_1350	0.60	-0.9
1,557,147	-		Echvi_1350	0.60	-0.1
1,557,167	+		Echvi_1350	0.62	-1.5
1,557,167	+		Echvi_1350	0.62	-0.8
1,557,187	-		Echvi_1350	0.63	+0.6
1,557,187	-		Echvi_1350	0.63	-0.4
1,557,234	+		Echvi_1350	0.67	-2.0
1,557,306	+		Echvi_1350	0.72	+0.7
1,557,307	-		Echvi_1350	0.72	+0.5