Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1348

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,553,120	+				-0.0
1,553,120	+				-1.4
1,553,120	+				-1.5
1,553,142	-				-0.6
1,553,142	-				-0.7
1,553,173	-				-0.4
1,553,208	+				+0.2
1,553,208	+				-2.7
1,553,208	+				-1.8
1,553,208	+				+1.4
1,553,208	+				-0.1
1,553,210	+				+0.1
1,553,210	+				+0.1
1,553,302	+		Echvi_1347	0.14	-0.7
1,553,394	+		Echvi_1347	0.34	-2.6
1,553,592	+		Echvi_1347	0.76	+0.6
1,553,592	+		Echvi_1347	0.76	-0.9
1,553,592	+		Echvi_1347	0.76	-2.0
1,553,594	+		Echvi_1347	0.77	-1.5
1,553,989	+				+0.6
1,554,077	+				+0.2
1,554,232	+		Echvi_1348	0.17	-0.2
1,554,232	+		Echvi_1348	0.17	+1.6
1,554,235	+		Echvi_1348	0.17	+2.6
1,554,645	+		Echvi_1348	0.56	-0.3
1,554,667	+		Echvi_1348	0.58	+1.9
1,554,671	+		Echvi_1348	0.58	+0.6
1,554,816	+		Echvi_1348	0.72	-0.1
1,554,839	+		Echvi_1348	0.74	+1.4
1,554,946	+		Echvi_1348	0.84	+0.5
1,554,970	+		Echvi_1348	0.86	+1.0
1,554,972	+		Echvi_1348	0.87	-0.1
1,555,014	+				+0.2
1,555,015	-				+1.6
1,555,128	+				+0.6
1,555,227	+				-0.0
1,555,227	+				+1.0
1,555,282	+				+1.1
1,555,416	+				-1.7
1,555,416	+				+0.8
1,555,455	+				-0.4
1,555,482	+				-0.4
1,555,484	+				+0.6
1,555,485	-				-0.4
1,555,485	-				+0.8
1,555,560	-				+1.1
1,555,584	+				-0.6
1,555,604	+				+0.1
1,555,615	+				-2.6
1,555,636	+				-2.2
1,555,675	+		Echvi_1349	0.12	-1.7
1,555,683	-		Echvi_1349	0.13	+0.7
1,555,694	+		Echvi_1349	0.15	-2.4
1,555,694	+		Echvi_1349	0.15	-1.9
1,555,696	+		Echvi_1349	0.15	-1.5
1,555,697	-		Echvi_1349	0.15	+0.1
1,555,712	+		Echvi_1349	0.17	-1.3
1,555,754	+		Echvi_1349	0.23	-0.6
1,555,757	+		Echvi_1349	0.23	-0.5
1,555,785	-		Echvi_1349	0.27	-2.1
1,555,807	+		Echvi_1349	0.30	-0.9
1,555,807	+		Echvi_1349	0.30	-1.3
1,555,813	+		Echvi_1349	0.31	+2.1
1,555,814	-		Echvi_1349	0.31	-1.3
1,555,814	-		Echvi_1349	0.31	-0.9
1,555,814	-		Echvi_1349	0.31	+0.3
1,555,823	-		Echvi_1349	0.32	-1.7
1,555,853	+		Echvi_1349	0.36	-1.1
1,555,853	+		Echvi_1349	0.36	-1.3
1,555,854	-		Echvi_1349	0.36	-0.1
1,555,895	-		Echvi_1349	0.42	-1.7
1,555,919	+		Echvi_1349	0.45	-3.4
1,555,928	+		Echvi_1349	0.46	-1.9
1,555,959	-		Echvi_1349	0.50	-2.4
1,555,964	+		Echvi_1349	0.51	-0.2
1,555,992	-		Echvi_1349	0.55	+0.6
1,555,992	-		Echvi_1349	0.55	-1.2
1,556,054	-		Echvi_1349	0.63	+1.3
1,556,054	-		Echvi_1349	0.63	-0.9
1,556,056	+		Echvi_1349	0.63	-1.3
1,556,057	-		Echvi_1349	0.63	-0.8
1,556,064	-		Echvi_1349	0.64	-3.1
1,556,070	-		Echvi_1349	0.65	-0.9
1,556,070	-		Echvi_1349	0.65	-0.4
1,556,082	+		Echvi_1349	0.67	-1.2
1,556,082	+		Echvi_1349	0.67	-1.4