Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1347

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,552,261	-		Echvi_1345	0.53	-0.3
1,552,301	-		Echvi_1345	0.56	-0.2
1,552,320	-		Echvi_1345	0.57	+0.2
1,552,320	-		Echvi_1345	0.57	+0.9
1,552,320	-		Echvi_1345	0.57	-0.1
1,552,339	-		Echvi_1345	0.58	+2.2
1,552,339	-		Echvi_1345	0.58	+0.1
1,552,339	-		Echvi_1345	0.58	+1.5
1,552,340	+		Echvi_1345	0.58	-0.4
1,552,340	+		Echvi_1345	0.58	+0.6
1,552,341	-		Echvi_1345	0.58	+0.8
1,552,482	+		Echvi_1345	0.67	+0.6
1,552,482	+		Echvi_1345	0.67	+0.2
1,552,490	+		Echvi_1345	0.68	-1.0
1,552,509	+		Echvi_1345	0.69	-0.1
1,552,509	+		Echvi_1345	0.69	+0.6
1,552,509	+		Echvi_1345	0.69	-0.2
1,552,509	+		Echvi_1345	0.69	-1.2
1,552,509	+		Echvi_1345	0.69	-0.3
1,552,511	+		Echvi_1345	0.69	-0.9
1,552,533	+		Echvi_1345	0.71	+1.6
1,552,534	-		Echvi_1345	0.71	+1.5
1,552,534	-		Echvi_1345	0.71	-0.2
1,552,535	+		Echvi_1345	0.71	+1.6
1,552,536	-		Echvi_1345	0.71	-1.2
1,552,570	+		Echvi_1345	0.73	+0.5
1,552,649	-		Echvi_1345	0.78	-1.8
1,552,707	+		Echvi_1345	0.82	+0.1
1,552,707	+		Echvi_1345	0.82	-0.4
1,552,722	-		Echvi_1345	0.83	+0.2
1,552,744	-		Echvi_1345	0.84	+0.5
1,552,779	+		Echvi_1345	0.86	+0.1
1,552,779	+		Echvi_1345	0.86	-0.1
1,552,851	-				+0.5
1,552,851	-				-0.3
1,552,851	-				+0.2
1,552,898	+				-0.6
1,552,898	+				-1.2
1,552,935	-				-0.2
1,552,960	-				-1.2
1,552,963	+				-0.4
1,552,964	-				-0.4
1,552,964	-				+0.1
1,552,969	-				+0.2
1,552,969	-				+0.1
1,552,971	+				-0.2
1,552,972	-				+1.2
1,552,973	+				-0.7
1,552,974	-				+0.6
1,552,974	-				-0.4
1,552,974	-				-0.5
1,552,974	-				-0.5
1,552,995	-		Echvi_1346	0.17	+0.2
1,553,000	-		Echvi_1346	0.20	-0.7
1,553,000	-		Echvi_1346	0.20	-1.9
1,553,000	-		Echvi_1346	0.20	+0.1
1,553,000	-		Echvi_1346	0.20	+0.8
1,553,019	-		Echvi_1346	0.31	+0.2
1,553,019	-		Echvi_1346	0.31	+1.4
1,553,024	-		Echvi_1346	0.34	-0.7
1,553,120	+				-0.0
1,553,120	+				-1.4
1,553,120	+				-1.5
1,553,142	-				-0.6
1,553,142	-				-0.7
1,553,173	-				-0.4
1,553,208	+				+0.2
1,553,208	+				-2.7
1,553,208	+				-1.8
1,553,208	+				+1.4
1,553,208	+				-0.1
1,553,210	+				+0.1
1,553,210	+				+0.1
1,553,302	+		Echvi_1347	0.14	-0.7
1,553,394	+		Echvi_1347	0.34	-2.6
1,553,592	+		Echvi_1347	0.76	+0.6
1,553,592	+		Echvi_1347	0.76	-0.9
1,553,592	+		Echvi_1347	0.76	-2.0
1,553,594	+		Echvi_1347	0.77	-1.5
1,553,989	+				+0.6
1,554,077	+				+0.2
1,554,232	+		Echvi_1348	0.17	-0.2
1,554,232	+		Echvi_1348	0.17	+1.6
1,554,235	+		Echvi_1348	0.17	+2.6
1,554,645	+		Echvi_1348	0.56	-0.3
1,554,667	+		Echvi_1348	0.58	+1.9
1,554,671	+		Echvi_1348	0.58	+0.6