Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1315

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,516,879	-				+0.3
1,517,071	+		Echvi_1314	0.16	-0.5
1,517,072	-		Echvi_1314	0.16	-1.0
1,517,102	+		Echvi_1314	0.20	-1.0
1,517,102	+		Echvi_1314	0.20	+0.5
1,517,102	+		Echvi_1314	0.20	-1.8
1,517,102	+		Echvi_1314	0.20	+0.1
1,517,103	-		Echvi_1314	0.20	-0.6
1,517,103	-		Echvi_1314	0.20	-0.4
1,517,103	-		Echvi_1314	0.20	-0.0
1,517,105	+		Echvi_1314	0.20	-0.3
1,517,106	-		Echvi_1314	0.20	-0.4
1,517,106	-		Echvi_1314	0.20	+1.0
1,517,106	-		Echvi_1314	0.20	+0.0
1,517,106	-		Echvi_1314	0.20	+0.6
1,517,110	+		Echvi_1314	0.20	-1.7
1,517,111	-		Echvi_1314	0.21	-1.2
1,517,111	-		Echvi_1314	0.21	-1.4
1,517,148	+		Echvi_1314	0.24	-1.4
1,517,148	+		Echvi_1314	0.24	+1.4
1,517,149	-		Echvi_1314	0.25	-0.7
1,517,171	+		Echvi_1314	0.27	-0.7
1,517,282	+		Echvi_1314	0.39	+0.2
1,517,293	-		Echvi_1314	0.40	-0.7
1,517,327	+		Echvi_1314	0.43	-2.8
1,517,327	+		Echvi_1314	0.43	-0.6
1,517,327	+		Echvi_1314	0.43	-1.7
1,517,328	-		Echvi_1314	0.43	-2.0
1,517,328	-		Echvi_1314	0.43	-0.6
1,517,328	-		Echvi_1314	0.43	-1.4
1,517,374	-		Echvi_1314	0.48	-0.8
1,517,381	-		Echvi_1314	0.49	-0.4
1,517,381	-		Echvi_1314	0.49	-2.2
1,517,435	+		Echvi_1314	0.55	-0.7
1,517,486	-		Echvi_1314	0.60	+0.2
1,517,491	-		Echvi_1314	0.61	-0.3
1,517,591	+		Echvi_1314	0.71	-1.2
1,517,591	+		Echvi_1314	0.71	-0.3
1,517,620	-		Echvi_1314	0.74	+0.6
1,517,620	-		Echvi_1314	0.74	-2.1
1,517,628	+		Echvi_1314	0.75	+0.6
1,517,658	+		Echvi_1314	0.78	+0.1
1,517,658	+		Echvi_1314	0.78	-0.1
1,517,659	-		Echvi_1314	0.79	+1.0
1,517,674	+		Echvi_1314	0.80	-0.3
1,517,677	+		Echvi_1314	0.80	-0.3
1,517,677	+		Echvi_1314	0.80	+0.6
1,517,678	-		Echvi_1314	0.81	-0.0
1,517,678	-		Echvi_1314	0.81	+0.4
1,517,692	+		Echvi_1314	0.82	+0.2
1,517,692	+		Echvi_1314	0.82	-1.1
1,517,692	+		Echvi_1314	0.82	-1.1
1,517,692	+		Echvi_1314	0.82	+0.9
1,517,692	+		Echvi_1314	0.82	-0.8
1,517,692	+		Echvi_1314	0.82	-0.5
1,517,692	+		Echvi_1314	0.82	+0.3
1,517,692	+		Echvi_1314	0.82	-1.2
1,517,693	-		Echvi_1314	0.82	-0.5
1,517,693	-		Echvi_1314	0.82	-1.7
1,517,693	-		Echvi_1314	0.82	-0.2
1,517,693	-		Echvi_1314	0.82	+0.9
1,517,755	+		Echvi_1314	0.89	-1.8
1,517,756	-		Echvi_1314	0.89	+0.9
1,517,829	+				-0.4
1,517,830	-				-1.1
1,517,834	+				-1.5
1,517,835	-				+0.0
1,517,835	-				-0.4
1,517,840	+				+0.5
1,517,840	+				+1.5
1,517,840	+				-1.7
1,517,953	-				+2.0
1,517,953	-				+0.8
1,517,958	+				-1.4
1,518,020	+		Echvi_1315	0.11	-1.3
1,518,020	+		Echvi_1315	0.11	-0.5
1,518,021	-		Echvi_1315	0.11	-0.8
1,518,021	-		Echvi_1315	0.11	-3.1
1,518,021	-		Echvi_1315	0.11	-0.9
1,518,037	+		Echvi_1315	0.13	-1.0
1,518,050	+		Echvi_1315	0.14	-0.6
1,518,051	-		Echvi_1315	0.14	-1.9
1,518,051	-		Echvi_1315	0.14	-0.2
1,518,051	-		Echvi_1315	0.14	-2.0
1,518,070	-		Echvi_1315	0.15	-0.4
1,518,113	-		Echvi_1315	0.18	-0.9
1,518,139	+		Echvi_1315	0.20	-1.7
1,518,140	-		Echvi_1315	0.20	-1.2
1,518,220	+		Echvi_1315	0.26	-1.3
1,518,221	-		Echvi_1315	0.26	-1.4
1,518,338	-		Echvi_1315	0.35	+1.2
1,518,406	+		Echvi_1315	0.40	-1.2
1,518,406	+		Echvi_1315	0.40	-1.2
1,518,427	+		Echvi_1315	0.41	-0.6
1,518,442	+		Echvi_1315	0.42	-1.0
1,518,443	-				+0.0
1,518,443	-		Echvi_1315	0.42	-0.5
1,518,446	+		Echvi_1315	0.42	-0.3
1,518,482	+		Echvi_1315	0.45	-0.5
1,518,482	+		Echvi_1315	0.45	-1.4
1,518,483	-		Echvi_1315	0.45	-1.0
1,518,573	+		Echvi_1315	0.52	-1.4
1,518,573	+		Echvi_1315	0.52	-0.9
1,518,574	-		Echvi_1315	0.52	-0.7
1,518,589	-		Echvi_1315	0.53	-1.1
1,518,632	+		Echvi_1315	0.56	-0.7
1,518,633	-		Echvi_1315	0.56	-1.7
1,518,635	-		Echvi_1315	0.56	+1.3
1,518,636	+		Echvi_1315	0.56	-1.4
1,518,637	-		Echvi_1315	0.56	-0.2
1,518,683	+		Echvi_1315	0.60	-2.0
1,518,727	-		Echvi_1315	0.63	-1.1
1,518,727	-		Echvi_1315	0.63	-2.2
1,518,782	-		Echvi_1315	0.67	-0.7
1,518,783	+		Echvi_1315	0.67	-1.0
1,518,783	+		Echvi_1315	0.67	-1.4
1,518,784	-		Echvi_1315	0.67	-0.0
1,518,784	-		Echvi_1315	0.67	-1.5
1,518,784	-		Echvi_1315	0.67	-0.7
1,518,820	+		Echvi_1315	0.70	-0.4
1,518,820	+		Echvi_1315	0.70	-1.8
1,518,820	+		Echvi_1315	0.70	-0.5
1,518,820	+		Echvi_1315	0.70	-1.5
1,518,822	+		Echvi_1315	0.70	+0.2
1,518,822	+		Echvi_1315	0.70	-1.1
1,518,939	+		Echvi_1315	0.78	-0.4
1,518,968	+		Echvi_1315	0.81	-0.8
1,518,969	-		Echvi_1315	0.81	-0.7
1,518,969	-		Echvi_1315	0.81	-0.8
1,518,989	+		Echvi_1315	0.82	-0.5
1,519,010	+		Echvi_1315	0.84	-0.6
1,519,011	-		Echvi_1315	0.84	-1.4
1,519,040	+		Echvi_1315	0.86	-0.2
1,519,040	+				+1.6
1,519,041	-		Echvi_1315	0.86	-0.6
1,519,041	-		Echvi_1315	0.86	-0.4
1,519,047	+		Echvi_1315	0.86	-0.1
1,519,047	+		Echvi_1315	0.86	-0.5
1,519,071	-		Echvi_1315	0.88	-1.8
1,519,071	-		Echvi_1315	0.88	-1.4
1,519,082	-		Echvi_1315	0.89	-1.6
1,519,082	-		Echvi_1315	0.89	-1.0
1,519,086	-		Echvi_1315	0.89	-0.6
1,519,089	+		Echvi_1315	0.89	+0.4
1,519,089	+		Echvi_1315	0.89	-1.0
1,519,090	-		Echvi_1315	0.89	+0.3
1,519,090	-		Echvi_1315	0.89	-1.2
1,519,090	-		Echvi_1315	0.89	-0.7
1,519,099	-				-1.8
1,519,123	+				-1.4
1,519,124	-				-1.3
1,519,124	-				-2.3
1,519,131	-				-2.8
1,519,131	-				-0.6
1,519,135	+				+1.3
1,519,173	-				-0.5
1,519,200	-				-1.5
1,519,212	+				-0.7
1,519,218	+				-2.1
1,519,283	+				-1.5
1,519,337	-				-0.8
1,519,338	+				+0.2
1,519,382	+				-1.3
1,519,397	-				-0.3
1,519,602	+				-0.2
1,519,603	-				-0.3
1,519,604	+				-1.0
1,519,604	+				-0.2
1,519,643	-				-2.0
1,519,680	+				-1.0
1,519,682	+				-0.2
1,519,682	+				-0.5
1,519,683	-				-1.8
1,519,683	-				+1.2
1,519,684	+				-2.1
1,519,684	+				-0.2
1,519,684	+				+2.6
1,519,684	+				-0.5
1,519,684	+				+0.5
1,519,684	+				-1.0
1,519,684	+				+0.2
1,519,685	-				-0.8
1,519,685	-				-1.0
1,519,706	+				+0.6
1,519,706	+				+0.6
1,519,706	+				+0.3
1,519,707	-				-0.3
1,519,710	+				-0.7
1,519,710	+				-0.9
1,519,711	-				-1.1
1,519,717	+				-0.8
1,519,717	+				+0.6
1,519,717	+				+0.3
1,519,717	+				-0.5
1,519,717	+				+0.2
1,519,718	-				+0.4
1,519,718	-				-2.3
1,519,718	-				-0.4
1,519,718	-				+1.3
1,519,718	-				-0.7
1,519,718	-				+1.6
1,519,772	+				-1.1
1,519,786	-				+0.2
1,519,797	+				+0.2
1,519,797	+				-1.0
1,519,797	+				+0.7
1,519,797	+				-0.6
1,519,798	-				-1.5
1,519,798	-				+0.0
1,519,798	-				+0.2
1,519,832	+				-1.3
1,519,841	+				+0.1
1,519,842	-				-0.2
1,519,906	-		Echvi_1316	0.13	+0.3
1,520,007	-		Echvi_1316	0.20	-0.6
1,520,115	+		Echvi_1316	0.28	-0.2
1,520,115	+		Echvi_1316	0.28	+0.1
1,520,129	+		Echvi_1316	0.29	-0.5
1,520,129	+		Echvi_1316	0.29	-0.3
1,520,129	+		Echvi_1316	0.29	+0.1
1,520,130	-		Echvi_1316	0.29	+0.5
1,520,130	-		Echvi_1316	0.29	-1.5
1,520,131	+		Echvi_1316	0.29	+0.3
1,520,137	-		Echvi_1316	0.29	+0.1
1,520,193	-		Echvi_1316	0.33	+1.6