Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1305

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,499,687	+				-0.8
1,499,688	-				-0.3
1,499,688	-				-1.3
1,499,740	+				+0.6
1,499,740	+				+0.6
1,499,741	-				+0.0
1,499,741	-				-0.4
1,499,747	-				-1.4
1,499,762	+				+0.5
1,499,789	+				-1.1
1,499,790	-				+2.4
1,499,793	+				+0.2
1,499,793	+				-0.8
1,499,793	+				-0.9
1,499,794	-				-1.6
1,499,794	-				+1.0
1,499,794	-				+0.9
1,499,818	+				-2.6
1,499,937	+				-3.1
1,499,962	+				-0.7
1,499,962	+				-0.5
1,499,963	-				-1.3
1,499,981	+				+1.2
1,499,981	+				-0.4
1,499,996	+				+0.9
1,500,103	+				-0.5
1,500,104	-				+0.5
1,500,104	-				-0.2
1,500,104	-				+1.6
1,500,171	+		Echvi_1304	0.17	+0.1
1,500,324	+		Echvi_1304	0.44	-1.7
1,500,344	-		Echvi_1304	0.47	+1.6
1,500,354	+		Echvi_1304	0.49	-0.2
1,500,396	+		Echvi_1304	0.57	-0.5
1,500,397	-		Echvi_1304	0.57	+1.1
1,500,440	-		Echvi_1304	0.64	+0.3
1,500,440	-		Echvi_1304	0.64	+0.4
1,500,440	-		Echvi_1304	0.64	-0.6
1,500,518	-		Echvi_1304	0.78	+1.6
1,500,528	-		Echvi_1304	0.80	-0.4
1,500,528	-		Echvi_1304	0.80	-0.2
1,500,528	-		Echvi_1304	0.80	-0.1
1,500,528	-		Echvi_1304	0.80	-1.1
1,500,590	+				-1.9
1,500,591	-				+0.4
1,500,608	-				+0.8
1,500,608	-				-0.3
1,500,608	-				-1.4
1,500,615	+				+0.9
1,500,628	+				-1.1
1,500,629	-				-0.9
1,500,707	+		Echvi_1305	0.11	-0.5
1,500,715	-		Echvi_1305	0.12	-0.5
1,500,719	+		Echvi_1305	0.13	-1.7
1,500,720	-		Echvi_1305	0.13	+1.0
1,500,735	-		Echvi_1305	0.15	+1.2
1,500,764	+		Echvi_1305	0.20	+1.2
1,500,765	-		Echvi_1305	0.20	-2.2
1,500,807	+		Echvi_1305	0.27	-2.4
1,500,808	-		Echvi_1305	0.27	-1.4
1,500,808	-		Echvi_1305	0.27	-1.0
1,500,808	-		Echvi_1305	0.27	-0.9
1,500,890	+		Echvi_1305	0.41	+0.2
1,500,900	-		Echvi_1305	0.43	+0.8
1,500,900	-		Echvi_1305	0.43	-1.4
1,500,918	-		Echvi_1305	0.46	-2.5
1,500,918	-		Echvi_1305	0.46	-1.2
1,500,941	-		Echvi_1305	0.49	-0.1
1,500,986	+		Echvi_1305	0.57	+0.3
1,501,013	+		Echvi_1305	0.61	-1.4
1,501,014	-		Echvi_1305	0.62	-1.4
1,501,050	+		Echvi_1305	0.67	-2.5
1,501,102	+		Echvi_1305	0.76	+0.0
1,501,143	+		Echvi_1305	0.83	-2.7
1,501,144	-		Echvi_1305	0.83	-1.1
1,501,160	+		Echvi_1305	0.86	-1.3
1,501,298	+				-0.2
1,501,326	-				-0.6
1,501,358	-				-0.7
1,501,358	-				+0.6
1,501,360	-				-0.5
1,501,367	-				-1.3
1,501,371	-				-1.1
1,501,371	-				+0.1
1,501,371	-				+1.3
1,501,416	+				+0.9
1,501,440	+				-1.4
1,501,446	-				-0.8
1,501,446	-				-0.8
1,501,449	+				+0.4
1,501,458	+				-1.9
1,501,480	+				+0.5
1,501,488	+				-0.5
1,501,489	-				-0.1
1,501,489	-				+0.0
1,501,494	+				-0.3
1,501,501	+				+0.9
1,501,502	-				+1.7
1,501,557	+				+0.5
1,501,687	+		Echvi_1306	0.12	+0.1
1,501,687	+		Echvi_1306	0.12	+1.4
1,501,687	+		Echvi_1306	0.12	-0.1
1,501,687	+		Echvi_1306	0.12	+0.7
1,501,687	+		Echvi_1306	0.12	-0.6
1,501,687	+		Echvi_1306	0.12	-0.0
1,501,688	-		Echvi_1306	0.12	-0.4
1,501,688	-		Echvi_1306	0.12	-0.7
1,501,688	-		Echvi_1306	0.12	+0.1
1,501,688	-		Echvi_1306	0.12	-0.2
1,501,688	-		Echvi_1306	0.12	+1.3
1,501,793	-		Echvi_1306	0.18	+0.3
1,501,833	+		Echvi_1306	0.21	-1.1
1,501,927	+		Echvi_1306	0.27	+0.2
1,501,927	+		Echvi_1306	0.27	-1.1
1,501,928	-		Echvi_1306	0.27	-1.2
1,501,939	+		Echvi_1306	0.27	-1.2
1,501,961	+		Echvi_1306	0.29	+0.7
1,502,005	+		Echvi_1306	0.31	-0.5
1,502,005	+		Echvi_1306	0.31	-0.2
1,502,005	+		Echvi_1306	0.31	-0.2
1,502,005	+		Echvi_1306	0.31	+0.2
1,502,005	+		Echvi_1306	0.31	-0.1
1,502,040	+		Echvi_1306	0.34	-0.4
1,502,040	+		Echvi_1306	0.34	-0.4
1,502,075	+		Echvi_1306	0.36	-0.8
1,502,076	-		Echvi_1306	0.36	+0.3
1,502,076	-		Echvi_1306	0.36	-0.8
1,502,076	-		Echvi_1306	0.36	+1.2
1,502,077	+		Echvi_1306	0.36	+0.6
1,502,077	+		Echvi_1306	0.36	+0.5
1,502,077	+		Echvi_1306	0.36	-0.1
1,502,077	+		Echvi_1306	0.36	-0.2
1,502,077	+		Echvi_1306	0.36	-0.4
1,502,078	-		Echvi_1306	0.36	-0.0
1,502,114	+		Echvi_1306	0.38	+1.0
1,502,114	+		Echvi_1306	0.38	+0.5
1,502,115	-		Echvi_1306	0.38	-0.3
1,502,152	+		Echvi_1306	0.41	+0.4
1,502,153	-		Echvi_1306	0.41	-0.7
1,502,154	+		Echvi_1306	0.41	-0.2