Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1297

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,493,431	+				+1.4
1,493,432	-				-1.8
1,493,436	+				+0.7
1,493,471	+				+1.6
1,493,471	+				+1.2
1,493,471	+				+0.6
1,493,471	+				+1.0
1,493,471	+				+0.1
1,493,472	-				-0.3
1,493,475	+				+1.2
1,493,476	-				-1.7
1,493,492	-				-0.8
1,493,600	+		Echvi_1297	0.43	-1.5
1,493,601	-		Echvi_1297	0.44	-2.7
1,493,601	-		Echvi_1297	0.44	-0.4
1,493,622	+		Echvi_1297	0.54	+0.4
1,493,622	+		Echvi_1297	0.54	-1.9
1,493,623	-		Echvi_1297	0.54	-0.4
1,493,668	-		Echvi_1297	0.76	-2.5
1,493,754	-				+0.2
1,493,765	+				+0.4
1,493,774	+				+0.4
1,493,774	+				-0.3
1,493,778	+				+1.0
1,493,778	+				-0.0
1,493,833	+				-0.2
1,493,916	+		Echvi_1298	0.19	-2.8
1,493,950	+		Echvi_1298	0.24	+0.4
1,493,950	+		Echvi_1298	0.24	+0.3
1,493,976	+		Echvi_1298	0.28	+0.3
1,493,976	+		Echvi_1298	0.28	+1.3
1,493,977	-		Echvi_1298	0.28	+0.8
1,493,977	-		Echvi_1298	0.28	+1.3
1,493,997	+		Echvi_1298	0.31	-1.4
1,493,997	+		Echvi_1298	0.31	+0.3
1,493,997	+		Echvi_1298	0.31	+2.0
1,494,036	+		Echvi_1298	0.36	+0.2
1,494,037	-		Echvi_1298	0.37	+0.6
1,494,051	+		Echvi_1298	0.39	+0.6
1,494,102	+		Echvi_1298	0.46	+0.6
1,494,102	+		Echvi_1298	0.46	-1.5
1,494,132	+		Echvi_1298	0.50	-2.8
1,494,231	-		Echvi_1298	0.65	+2.2
1,494,252	-		Echvi_1298	0.68	+0.2
1,494,256	-		Echvi_1298	0.69	-0.5
1,494,288	-		Echvi_1298	0.73	+0.2
1,494,291	+		Echvi_1298	0.74	+0.2
1,494,291	+		Echvi_1298	0.74	-0.0
1,494,292	-		Echvi_1298	0.74	+0.9
1,494,314	+		Echvi_1298	0.77	+2.2
1,494,315	-		Echvi_1298	0.77	+0.8
1,494,315	-		Echvi_1298	0.77	-0.2
1,494,332	+		Echvi_1298	0.80	-2.1
1,494,355	+		Echvi_1298	0.83	-1.2
1,494,355	+		Echvi_1298	0.83	+0.5
1,494,356	-		Echvi_1298	0.83	+0.1
1,494,366	+		Echvi_1298	0.85	-0.2
1,494,366	+		Echvi_1298	0.85	-2.0
1,494,367	-		Echvi_1298	0.85	-0.0
1,494,441	+				-1.0
1,494,454	+				-0.8
1,494,455	-				-0.4
1,494,468	+				-1.7
1,494,495	+				+1.1
1,494,499	+				+1.2
1,494,499	+				-0.7
1,494,499	+				-2.4
1,494,499	+				+0.0
1,494,500	-				-0.4
1,494,500	-				+1.2
1,494,500	-				+1.6
1,494,554	+				+0.5
1,494,584	+				+1.2
1,494,585	-				-0.5
1,494,663	+				-0.2
1,494,663	+				-1.7
1,494,664	-				+0.4
1,494,677	+				-0.6
1,494,678	-				-0.8
1,494,701	+				-0.5
1,494,702	-				+0.4
1,494,702	-				+0.1
1,494,705	+				+0.2