Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1280

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,468,050	+		Echvi_1279	0.39	+0.7
1,468,050	+		Echvi_1279	0.39	-1.2
1,468,088	+		Echvi_1279	0.42	+0.6
1,468,088	+		Echvi_1279	0.42	+1.1
1,468,088	+		Echvi_1279	0.42	-0.5
1,468,088	+		Echvi_1279	0.42	-0.6
1,468,088	+		Echvi_1279	0.42	+2.2
1,468,089	-		Echvi_1279	0.42	-0.2
1,468,089	-		Echvi_1279	0.42	-0.3
1,468,089	-		Echvi_1279	0.42	-1.1
1,468,089	-		Echvi_1279	0.42	-0.6
1,468,089	-		Echvi_1279	0.42	+0.0
1,468,111	+		Echvi_1279	0.43	-0.6
1,468,330	+		Echvi_1279	0.58	-0.4
1,468,413	+		Echvi_1279	0.64	+0.1
1,468,442	+		Echvi_1279	0.65	+0.3
1,468,451	-		Echvi_1279	0.66	+0.2
1,468,467	+		Echvi_1279	0.67	-0.2
1,468,517	+		Echvi_1279	0.70	-0.2
1,468,534	+		Echvi_1279	0.72	+0.0
1,468,571	-		Echvi_1279	0.74	-0.7
1,468,726	+		Echvi_1279	0.84	-0.4
1,468,726	+		Echvi_1279	0.84	+1.4
1,468,775	+		Echvi_1279	0.88	-1.5
1,468,910	-				+0.4
1,468,918	+				-0.4
1,468,918	+				-1.3
1,468,919	-				+0.2
1,469,021	+				-0.1
1,469,021	+				+0.1
1,469,022	-				+2.9
1,469,028	-				+1.2
1,469,028	-				+1.1
1,469,038	+				+0.9
1,469,038	+				-0.8
1,469,263	+		Echvi_1280	0.23	+0.8
1,469,428	+		Echvi_1280	0.40	-2.9
1,469,428	+		Echvi_1280	0.40	+0.0
1,469,642	+		Echvi_1280	0.62	-1.5
1,469,688	+		Echvi_1280	0.67	+1.6
1,469,715	+		Echvi_1280	0.70	+0.0
1,469,942	+				-1.0
1,469,942	+				+0.6
1,469,942	+				-0.6
1,469,942	+				-0.7
1,469,942	+				+0.3
1,469,942	+				-0.6
1,469,942	+				+1.0
1,470,017	+		Echvi_1281	0.16	+0.5
1,470,017	+		Echvi_1281	0.16	+0.2
1,470,018	-		Echvi_1281	0.16	+0.3
1,470,037	+		Echvi_1281	0.26	+0.4
1,470,037	+		Echvi_1281	0.26	-0.0
1,470,044	+		Echvi_1281	0.29	+1.6
1,470,052	+		Echvi_1281	0.33	+1.2
1,470,052	+		Echvi_1281	0.33	+0.6
1,470,085	+		Echvi_1281	0.50	-1.5
1,470,085	+		Echvi_1281	0.50	+0.0
1,470,085	+		Echvi_1281	0.50	-0.3
1,470,106	+		Echvi_1281	0.61	+0.0
1,470,108	+		Echvi_1281	0.62	+0.3
1,470,108	+		Echvi_1281	0.62	+0.3
1,470,108	+		Echvi_1281	0.62	+0.5
1,470,108	+		Echvi_1281	0.62	-1.2
1,470,122	-		Echvi_1281	0.69	+1.0
1,470,141	+		Echvi_1281	0.78	+2.3
1,470,345	+				-0.9
1,470,345	+				+1.3
1,470,389	+		Echvi_1282	0.13	-1.3
1,470,443	+		Echvi_1282	0.16	+0.1
1,470,549	+		Echvi_1282	0.23	-0.3
1,470,597	+		Echvi_1282	0.26	-0.2
1,470,597	+		Echvi_1282	0.26	-0.2
1,470,597	+		Echvi_1282	0.26	-0.0
1,470,597	+		Echvi_1282	0.26	-0.2
1,470,598	-		Echvi_1282	0.27	+1.3
1,470,620	+		Echvi_1282	0.28	+0.4
1,470,620	+		Echvi_1282	0.28	+0.5
1,470,620	+		Echvi_1282	0.28	-1.0
1,470,620	+		Echvi_1282	0.28	-0.1
1,470,621	-		Echvi_1282	0.28	+4.2
1,470,624	+		Echvi_1282	0.28	-0.5
1,470,624	+		Echvi_1282	0.28	-0.9
1,470,818	+		Echvi_1282	0.41	-2.4
1,470,819	-		Echvi_1282	0.41	+1.6