Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1274

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,460,255	+		Echvi_1273	0.51	+0.6
1,460,255	+		Echvi_1273	0.51	-0.2
1,460,255	+		Echvi_1273	0.51	+0.9
1,460,255	+		Echvi_1273	0.51	-0.5
1,460,256	-		Echvi_1273	0.51	-1.4
1,460,261	+		Echvi_1273	0.52	-2.0
1,460,261	+		Echvi_1273	0.52	-0.5
1,460,261	+		Echvi_1273	0.52	+0.6
1,460,262	-		Echvi_1273	0.52	+0.8
1,460,262	-		Echvi_1273	0.52	-0.9
1,460,262	-		Echvi_1273	0.52	+1.9
1,460,262	-		Echvi_1273	0.52	-0.7
1,460,441	+		Echvi_1273	0.65	-0.1
1,460,442	-		Echvi_1273	0.65	-1.4
1,460,442	-		Echvi_1273	0.65	+0.4
1,460,442	-		Echvi_1273	0.65	-0.4
1,460,442	-		Echvi_1273	0.65	+0.3
1,460,442	-		Echvi_1273	0.65	+0.2
1,460,442	-		Echvi_1273	0.65	-0.7
1,460,604	+		Echvi_1273	0.77	+0.1
1,460,604	+		Echvi_1273	0.77	+0.4
1,460,699	-		Echvi_1273	0.83	+0.6
1,460,776	-		Echvi_1273	0.89	+0.0
1,460,932	+				-1.0
1,460,946	-				-0.7
1,461,012	-				-1.6
1,461,019	-				-0.0
1,461,024	+				+0.1
1,461,024	+				+0.6
1,461,024	+				+1.6
1,461,024	+				-2.3
1,461,025	-				+0.6
1,461,025	-				-0.3
1,461,126	+				-0.2
1,461,127	-				-0.3
1,461,130	+				-1.0
1,461,204	+				-1.5
1,461,205	-				+0.4
1,461,255	+				+0.2
1,461,255	+				-1.0
1,461,255	+				+0.0
1,461,255	+				-1.4
1,461,255	+				-0.2
1,461,256	-				+0.0
1,461,256	-				-0.8
1,461,405	+		Echvi_1274	0.12	+0.2
1,461,405	+		Echvi_1274	0.12	-0.8
1,461,405	+		Echvi_1274	0.12	-0.0
1,461,414	+		Echvi_1274	0.12	-0.4
1,461,414	+		Echvi_1274	0.12	-0.5
1,461,414	+		Echvi_1274	0.12	-0.4
1,461,414	+		Echvi_1274	0.12	+0.4
1,461,433	-		Echvi_1274	0.13	+1.1
1,461,433	-		Echvi_1274	0.13	-0.7
1,461,451	+		Echvi_1274	0.14	-0.4
1,461,452	-		Echvi_1274	0.15	+0.3
1,461,564	+		Echvi_1274	0.21	+0.9
1,461,564	+		Echvi_1274	0.21	+2.0
1,461,631	-		Echvi_1274	0.25	+0.1
1,461,633	+		Echvi_1274	0.25	-0.2
1,461,712	+		Echvi_1274	0.30	-0.2
1,461,734	+		Echvi_1274	0.31	+0.3
1,461,735	-		Echvi_1274	0.31	+1.6
1,461,787	-		Echvi_1274	0.34	+0.5
1,461,964	+		Echvi_1274	0.44	-0.4
1,461,965	-		Echvi_1274	0.44	+2.4
1,461,965	-		Echvi_1274	0.44	-0.8
1,462,007	+		Echvi_1274	0.47	-0.5
1,462,007	+		Echvi_1274	0.47	+0.5
1,462,045	+		Echvi_1274	0.49	-0.1
1,462,045	+		Echvi_1274	0.49	+2.5
1,462,046	-		Echvi_1274	0.49	+1.2
1,462,069	+		Echvi_1274	0.51	+0.7
1,462,098	+		Echvi_1274	0.52	+0.2
1,462,127	-		Echvi_1274	0.54	+0.7
1,462,215	+		Echvi_1274	0.59	-1.5
1,462,390	-		Echvi_1274	0.69	+0.0
1,462,472	-		Echvi_1274	0.74	-0.5
1,462,521	+		Echvi_1274	0.77	-0.2
1,462,521	+		Echvi_1274	0.77	+0.2
1,462,522	-		Echvi_1274	0.77	-0.4
1,462,670	-		Echvi_1274	0.86	+0.6
1,462,715	+		Echvi_1274	0.88	+0.1
1,462,901	+				-1.0
1,462,902	-				-1.0
1,462,902	-				-1.9
1,462,902	-				-0.6
1,462,902	-				-2.4
1,462,918	+				+0.4
1,463,085	+				-0.6
1,463,360	+		Echvi_1275	0.27	+1.0
1,463,360	+		Echvi_1275	0.27	+1.6
1,463,360	+		Echvi_1275	0.27	-0.2
1,463,361	-		Echvi_1275	0.27	+2.0
1,463,361	-		Echvi_1275	0.27	-1.8
1,463,361	-		Echvi_1275	0.27	-0.5
1,463,370	-		Echvi_1275	0.28	+0.4
1,463,403	+		Echvi_1275	0.30	-0.1
1,463,421	+		Echvi_1275	0.31	-0.1
1,463,421	+		Echvi_1275	0.31	+1.0
1,463,564	+		Echvi_1275	0.41	+0.9
1,463,564	+		Echvi_1275	0.41	-0.4
1,463,565	-		Echvi_1275	0.41	-0.3
1,463,618	+		Echvi_1275	0.44	-1.8
1,463,619	-		Echvi_1275	0.44	+0.8
1,463,678	+		Echvi_1275	0.48	+2.6
1,463,678	+		Echvi_1275	0.48	+0.1
1,463,735	+		Echvi_1275	0.52	+0.5
1,463,736	-		Echvi_1275	0.52	+1.2
1,463,743	+		Echvi_1275	0.53	+1.6
1,463,743	+		Echvi_1275	0.53	+0.6
1,463,800	-		Echvi_1275	0.56	+1.0