Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1194

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,370,410	+		Echvi_1193	0.87	+0.5
1,370,410	+		Echvi_1193	0.87	-0.5
1,370,459	-				+0.6
1,370,498	+				+0.6
1,370,499	-				+0.0
1,370,516	+				+0.8
1,370,561	+				-0.7
1,370,562	-				-0.1
1,370,562	-				+0.0
1,370,562	-				+3.4
1,370,562	-				-2.5
1,370,611	+				-0.3
1,370,611	+				+0.3
1,370,628	+				-0.8
1,370,640	+				+0.1
1,370,641	-				-0.2
1,370,646	-				+0.4
1,370,646	-				-1.0
1,370,702	-				+0.6
1,370,702	-				-1.3
1,370,702	-				-0.6
1,370,758	+				-0.6
1,370,793	+				-1.3
1,370,793	+				+1.6
1,370,807	+				-0.1
1,370,946	-				+0.4
1,371,088	+				-1.2
1,371,089	-				-0.6
1,371,100	+				-2.4
1,371,100	+				-0.9
1,371,100	+				-0.3
1,371,101	-				+0.1
1,371,101	-				-0.3
1,371,146	+				-0.1
1,371,166	+				-0.8
1,371,167	-				-2.1
1,371,175	+				-1.9
1,371,175	+				-1.2
1,371,175	+				-0.3
1,371,176	-				-1.4
1,371,176	-				-2.5
1,371,176	-				+0.0
1,371,176	-				-0.4
1,371,176	-				-1.8
1,371,176	-				+0.2
1,371,177	+				-0.2
1,371,177	+				-0.5
1,371,183	+				-0.6
1,371,194	+				-0.4
1,371,229	+				-0.2
1,371,230	-				-1.0
1,371,234	-				-0.2
1,371,242	+				-0.7
1,371,270	+				+1.1
1,371,270	+				-2.0
1,371,271	-				-0.9
1,371,271	-				+0.5
1,371,272	+				-0.7
1,371,272	+				-0.3
1,371,272	+				-0.4
1,371,272	+				-0.2
1,371,273	-				+0.2
1,371,273	-				+0.4
1,371,273	-				-0.1
1,371,352	+				-0.6
1,371,353	-				+0.4
1,371,353	-				+0.2
1,371,364	+				+1.6
1,371,365	-				-0.7
1,371,365	-				+0.8
1,371,409	+		Echvi_1194	0.13	+0.6
1,371,410	-		Echvi_1194	0.13	-0.9
1,371,425	+		Echvi_1194	0.16	-1.1
1,371,425	+		Echvi_1194	0.16	+0.0
1,371,425	+		Echvi_1194	0.16	-0.9
1,371,425	+		Echvi_1194	0.16	-0.2
1,371,460	+		Echvi_1194	0.24	-0.8
1,371,460	+		Echvi_1194	0.24	-0.9
1,371,460	+		Echvi_1194	0.24	-0.3
1,371,473	+		Echvi_1194	0.27	-0.5
1,371,473	+		Echvi_1194	0.27	+0.2
1,371,474	-		Echvi_1194	0.27	-1.6
1,371,474	-		Echvi_1194	0.27	+0.5
1,371,485	+		Echvi_1194	0.30	+0.0
1,371,493	-		Echvi_1194	0.32	+0.1
1,371,493	-		Echvi_1194	0.32	-0.2
1,371,497	+		Echvi_1194	0.32	-0.3
1,371,497	+		Echvi_1194	0.32	+1.0
1,371,497	+		Echvi_1194	0.32	+1.6
1,371,497	+		Echvi_1194	0.32	+0.7
1,371,498	-		Echvi_1194	0.33	+0.0
1,371,498	-		Echvi_1194	0.33	-1.7
1,371,606	+		Echvi_1194	0.57	+0.3
1,371,606	+		Echvi_1194	0.57	+0.6
1,371,606	+		Echvi_1194	0.57	+0.0
1,371,607	-		Echvi_1194	0.57	+3.8
1,371,617	+		Echvi_1194	0.59	-0.1
1,371,617	+		Echvi_1194	0.59	-0.3
1,371,617	+		Echvi_1194	0.59	-1.1
1,371,617	+		Echvi_1194	0.59	-0.3
1,371,618	-		Echvi_1194	0.59	+0.0
1,371,618	-		Echvi_1194	0.59	+1.0
1,371,620	+		Echvi_1194	0.60	-1.4
1,371,620	+		Echvi_1194	0.60	-0.8
1,371,620	+		Echvi_1194	0.60	-0.1
1,371,620	+		Echvi_1194	0.60	+0.3
1,371,620	+		Echvi_1194	0.60	+0.7
1,371,621	-		Echvi_1194	0.60	+0.5
1,371,621	-		Echvi_1194	0.60	-2.8
1,371,648	+		Echvi_1194	0.66	+0.2
1,371,649	-		Echvi_1194	0.66	-0.5
1,371,665	-		Echvi_1194	0.70	-0.3
1,371,687	-		Echvi_1194	0.75	-1.6
1,371,703	+		Echvi_1194	0.78	+0.4
1,371,703	+		Echvi_1194	0.78	-0.6
1,371,704	-		Echvi_1194	0.78	-1.2
1,371,704	-		Echvi_1194	0.78	+2.2
1,371,709	+		Echvi_1194	0.80	+1.2
1,371,709	+		Echvi_1194	0.80	-0.4
1,371,712	-		Echvi_1194	0.80	+0.1
1,371,780	+				+0.0
1,371,780	+				-1.2
1,371,788	+				+0.6
1,371,791	-				-1.4
1,371,791	-				+0.3
1,371,791	-				+0.8
1,371,833	+				-1.1
1,371,985	+				-1.2
1,372,006	-				-0.8
1,372,006	-				+1.4
1,372,013	-				-0.1
1,372,038	-				+0.2
1,372,147	+		Echvi_1195	0.12	-0.4
1,372,248	+		Echvi_1195	0.31	+1.1
1,372,249	-		Echvi_1195	0.32	-1.7
1,372,285	+		Echvi_1195	0.39	-0.2
1,372,313	+		Echvi_1195	0.44	+0.1
1,372,314	-		Echvi_1195	0.44	-0.8
1,372,412	-		Echvi_1195	0.64	-1.3
1,372,426	+		Echvi_1195	0.66	+1.2
1,372,427	-		Echvi_1195	0.66	-1.6
1,372,437	-		Echvi_1195	0.68	-1.0
1,372,449	+		Echvi_1195	0.71	-1.4
1,372,478	+		Echvi_1195	0.76	-0.9
1,372,479	-		Echvi_1195	0.77	-0.4
1,372,479	-		Echvi_1195	0.77	-0.8
1,372,575	+				+0.1
1,372,601	-				-2.3
1,372,670	+				+0.9
1,372,672	+				+0.0
1,372,673	-				-0.6
1,372,673	-				-0.5
1,372,686	+				-0.6