Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1188

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,361,989	-				+0.1
1,362,862	-				+1.6
1,362,865	-				+0.6
1,362,894	-				+0.0
1,363,085	-		Echvi_1188	0.18	+0.7
1,363,190	-		Echvi_1188	0.26	+0.9
1,363,190	-		Echvi_1188	0.26	+1.0
1,363,192	-		Echvi_1188	0.26	+1.9
1,363,261	-		Echvi_1188	0.32	+0.9
1,363,310	-		Echvi_1188	0.35	+0.3
1,363,310	-		Echvi_1188	0.35	+0.0
1,363,310	-		Echvi_1188	0.35	-1.7
1,363,310	-		Echvi_1188	0.35	+0.4
1,363,603	-		Echvi_1188	0.59	+0.3
1,363,692	-		Echvi_1188	0.66	+1.8
1,363,713	-		Echvi_1188	0.67	+1.6
1,363,720	-		Echvi_1188	0.68	+1.2
1,363,889	-		Echvi_1188	0.81	+1.0
1,363,944	-		Echvi_1188	0.85	+0.4
1,363,963	-		Echvi_1188	0.87	-0.1
1,364,112	-				+1.0
1,364,133	-				-0.4
1,364,133	-				-0.2
1,364,133	-				-0.1
1,364,133	-				+1.2
1,364,267	-				+0.8
1,364,282	-				+0.8
1,364,282	-				-0.7
1,364,282	-				+0.1
1,364,282	-				-0.4
1,364,282	-				-0.7
1,364,282	-				+1.2
1,364,282	-				+1.6
1,364,282	-				-1.2
1,364,312	+				+0.3
1,364,313	-				+0.1
1,364,359	-				+0.5
1,364,375	+				-0.5
1,364,375	+				+0.9
1,364,375	+				-0.3
1,364,376	-				+1.4
1,364,376	-				+0.8
1,364,379	+				-1.0
1,364,379	+				+1.0
1,364,380	-				+1.5
1,364,384	+				-1.9
1,364,458	+				-0.4
1,364,601	+				+0.0
1,364,601	+				+0.3
1,364,601	+				+1.4
1,364,614	-				+0.5
1,364,617	+				+0.6
1,364,618	-				+0.9
1,364,693	-				-1.7
1,364,825	+		Echvi_1189	0.22	-0.2
1,364,826	-		Echvi_1189	0.22	+1.0
1,364,915	+		Echvi_1189	0.32	-1.2
1,364,916	-		Echvi_1189	0.32	+0.2
1,364,916	-		Echvi_1189	0.32	+0.2
1,364,982	+		Echvi_1189	0.39	-0.5
1,364,982	+		Echvi_1189	0.39	+0.7
1,364,982	+		Echvi_1189	0.39	-0.2
1,364,982	+		Echvi_1189	0.39	-0.4
1,364,983	-		Echvi_1189	0.39	-0.4
1,364,983	-		Echvi_1189	0.39	+0.5
1,365,110	-		Echvi_1189	0.52	+0.9
1,365,111	+		Echvi_1189	0.52	-1.1
1,365,117	+		Echvi_1189	0.53	-1.1
1,365,127	+		Echvi_1189	0.54	-0.8
1,365,127	+		Echvi_1189	0.54	+0.1