Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1154

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,321,582	+		Echvi_1153	0.41	+0.3
1,321,583	-		Echvi_1153	0.41	+0.5
1,321,632	-		Echvi_1153	0.45	-1.0
1,321,642	-		Echvi_1153	0.46	-0.1
1,321,711	-		Echvi_1153	0.51	+0.2
1,321,969	+		Echvi_1153	0.69	-0.6
1,322,023	+		Echvi_1153	0.73	+0.6
1,322,024	-		Echvi_1153	0.73	-0.2
1,322,025	+		Echvi_1153	0.73	-0.2
1,322,025	+		Echvi_1153	0.73	+0.0
1,322,026	-		Echvi_1153	0.73	-0.2
1,322,026	-		Echvi_1153	0.73	-0.5
1,322,026	-		Echvi_1153	0.73	-0.7
1,322,066	+		Echvi_1153	0.76	+1.3
1,322,066	+		Echvi_1153	0.76	+1.6
1,322,067	-		Echvi_1153	0.76	-0.4
1,322,067	-		Echvi_1153	0.76	-0.2
1,322,067	-		Echvi_1153	0.76	+0.7
1,322,076	+		Echvi_1153	0.77	-0.0
1,322,149	-		Echvi_1153	0.82	+0.9
1,322,152	-		Echvi_1153	0.82	+0.3
1,322,228	+		Echvi_1153	0.88	+0.2
1,322,250	-		Echvi_1153	0.89	-0.3
1,322,325	+				-0.0
1,322,325	+				-0.2
1,322,326	-				-1.8
1,322,405	+				-0.3
1,322,405	+				-0.7
1,322,405	+				-0.3
1,322,406	-				+0.2
1,322,406	-				-0.6
1,322,406	-				+0.4
1,322,406	-				+1.3
1,322,427	+				-0.6
1,322,427	+				+0.3
1,322,428	-				-1.1
1,322,428	-				+0.3
1,322,430	-				+0.6
1,322,457	-				+0.6
1,322,461	+				-0.5
1,322,461	+				+0.4
1,322,461	+				+0.1
1,322,461	+				+0.7
1,322,461	+				-1.2
1,322,462	-				+1.4
1,322,462	-				-0.6
1,322,520	+				+0.5
1,322,520	+				-0.3
1,322,526	+				-0.5
1,322,527	-				+0.8
1,322,527	-				-1.0
1,322,632	+		Echvi_1154	0.11	+1.2
1,322,638	+		Echvi_1154	0.12	+0.0
1,322,638	+		Echvi_1154	0.12	+0.5
1,322,638	+		Echvi_1154	0.12	-0.1
1,322,638	+		Echvi_1154	0.12	+0.4
1,322,639	-		Echvi_1154	0.12	-0.9
1,322,639	-		Echvi_1154	0.12	-0.6
1,322,639	-		Echvi_1154	0.12	-0.7
1,322,639	-		Echvi_1154	0.12	-0.3
1,322,639	-		Echvi_1154	0.12	-1.8
1,322,651	-		Echvi_1154	0.14	-0.5
1,322,774	+		Echvi_1154	0.32	-0.3
1,322,775	-		Echvi_1154	0.32	+0.6
1,322,817	+		Echvi_1154	0.38	+1.9
1,322,817	+		Echvi_1154	0.38	-2.4
1,322,832	+		Echvi_1154	0.40	+1.3
1,322,833	-		Echvi_1154	0.40	-0.6
1,322,881	-		Echvi_1154	0.47	-0.9
1,322,881	-		Echvi_1154	0.47	-1.3
1,322,957	-		Echvi_1154	0.58	-2.9
1,322,957	-		Echvi_1154	0.58	-0.7
1,322,957	-		Echvi_1154	0.58	-0.1
1,322,962	-		Echvi_1154	0.59	-0.8
1,322,962	-		Echvi_1154	0.59	+0.1
1,322,962	-		Echvi_1154	0.59	-0.3
1,322,988	+		Echvi_1154	0.63	-0.2
1,322,988	+		Echvi_1154	0.63	-0.7
1,322,989	-		Echvi_1154	0.63	+0.2
1,322,989	-		Echvi_1154	0.63	-0.5
1,323,044	-		Echvi_1154	0.71	+0.3
1,323,044	-		Echvi_1154	0.71	-0.2
1,323,073	+		Echvi_1154	0.75	-0.9
1,323,073	+		Echvi_1154	0.75	-0.6
1,323,073	+		Echvi_1154	0.75	-0.7
1,323,074	-		Echvi_1154	0.75	-1.1
1,323,074	-		Echvi_1154	0.75	-1.0
1,323,079	-		Echvi_1154	0.76	-0.4
1,323,079	-		Echvi_1154	0.76	-0.4
1,323,128	+		Echvi_1154	0.83	-0.4
1,323,128	+		Echvi_1154	0.83	-0.7
1,323,128	+		Echvi_1154	0.83	+0.4
1,323,172	+		Echvi_1154	0.90	+0.2
1,323,172	+		Echvi_1154	0.90	+1.0
1,323,174	+		Echvi_1154	0.90	-0.5
1,323,174	+				+0.6
1,323,175	-				-1.6
1,323,200	+				+0.2
1,323,200	+				+0.2
1,323,201	-				-0.9
1,323,228	-				+0.1
1,323,255	+				+0.0
1,323,274	+				+0.4
1,323,274	+				-0.3
1,323,274	+				-0.7
1,323,275	-				+1.1
1,323,275	-				+0.3
1,323,277	+				-0.6
1,323,277	+				-0.5
1,323,277	+				-1.1
1,323,277	+				+0.1
1,323,277	+				-0.0
1,323,278	-				+2.1
1,323,278	-				+0.5
1,323,278	-				-0.5
1,323,278	-				+0.1
1,323,278	-				+1.8
1,323,278	-				-0.4
1,323,285	+				-0.9
1,323,285	+				-1.3
1,323,285	+				+0.4
1,323,296	+		Echvi_1155	0.13	+1.3
1,323,296	+		Echvi_1155	0.13	+0.7
1,323,321	+		Echvi_1155	0.33	+0.3
1,323,351	+		Echvi_1155	0.56	+0.9
1,323,351	+		Echvi_1155	0.56	+1.0
1,323,352	-		Echvi_1155	0.57	-0.3
1,323,352	-		Echvi_1155	0.57	-0.9
1,323,352	-		Echvi_1155	0.57	+0.0
1,323,404	-				-0.1
1,323,481	+				+0.8
1,323,490	+				+0.6
1,323,530	-				+0.3
1,323,530	-				-0.2
1,323,564	-				-1.3
1,323,663	-		Echvi_1156	0.16	-0.3
1,323,672	-		Echvi_1156	0.17	-1.4
1,323,802	-		Echvi_1156	0.28	+0.7
1,323,931	-		Echvi_1156	0.40	-0.4
1,323,961	+		Echvi_1156	0.43	-0.2
1,323,972	+		Echvi_1156	0.44	+0.9
1,323,984	-		Echvi_1156	0.45	+0.8
1,323,993	+		Echvi_1156	0.46	+1.4
1,323,993	+		Echvi_1156	0.46	-0.8
1,323,994	-		Echvi_1156	0.46	+1.0
1,323,995	+		Echvi_1156	0.46	+0.6
1,324,015	+		Echvi_1156	0.48	-0.2
1,324,015	+		Echvi_1156	0.48	+1.8
1,324,016	-		Echvi_1156	0.48	+0.3
1,324,135	+		Echvi_1156	0.58	-0.5
1,324,135	+		Echvi_1156	0.58	-1.3
1,324,136	-		Echvi_1156	0.58	+0.6
1,324,157	-		Echvi_1156	0.60	-0.7
1,324,233	-		Echvi_1156	0.67	+2.6