Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1121

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,283,351	-		Echvi_1119	0.54	-0.0
1,283,373	-		Echvi_1119	0.60	-0.4
1,283,594	+				+0.7
1,283,595	-				+0.9
1,283,597	-				+0.0
1,283,689	-				+0.5
1,283,699	+				+0.2
1,283,700	-				+1.1
1,283,700	-				+0.1
1,283,700	-				-2.5
1,283,703	+				-0.3
1,283,756	+		Echvi_1120	0.12	-0.1
1,283,778	+		Echvi_1120	0.15	-0.5
1,283,821	+		Echvi_1120	0.21	+0.0
1,283,821	+		Echvi_1120	0.21	+1.2
1,283,821	+		Echvi_1120	0.21	-0.2
1,283,826	-		Echvi_1120	0.22	-1.6
1,283,833	+		Echvi_1120	0.23	+0.2
1,283,834	-		Echvi_1120	0.23	-1.9
1,283,834	-		Echvi_1120	0.23	+0.2
1,283,840	+		Echvi_1120	0.24	-1.0
1,283,872	+		Echvi_1120	0.29	-1.7
1,283,907	+		Echvi_1120	0.34	+0.2
1,283,907	+		Echvi_1120	0.34	+0.5
1,283,912	+		Echvi_1120	0.35	-0.4
1,283,913	-		Echvi_1120	0.35	-0.3
1,283,917	+		Echvi_1120	0.36	+0.3
1,283,917	+		Echvi_1120	0.36	+0.0
1,283,918	-		Echvi_1120	0.36	-0.1
1,283,982	-		Echvi_1120	0.46	-0.4
1,283,985	+		Echvi_1120	0.46	+0.2
1,283,985	+		Echvi_1120	0.46	-1.0
1,283,985	+		Echvi_1120	0.46	-0.2
1,283,996	+		Echvi_1120	0.48	+0.1
1,284,041	+		Echvi_1120	0.55	-0.1
1,284,042	-		Echvi_1120	0.55	-2.0
1,284,042	-		Echvi_1120	0.55	+0.1
1,284,071	+		Echvi_1120	0.59	-0.5
1,284,128	+		Echvi_1120	0.68	-0.6
1,284,197	+		Echvi_1120	0.78	+0.4
1,284,197	+		Echvi_1120	0.78	-0.1
1,284,199	+		Echvi_1120	0.79	+0.8
1,284,199	+		Echvi_1120	0.79	+1.0
1,284,200	-		Echvi_1120	0.79	+0.4
1,284,200	-		Echvi_1120	0.79	-1.8
1,284,200	-		Echvi_1120	0.79	+1.6
1,284,200	-		Echvi_1120	0.79	-0.2
1,284,200	-		Echvi_1120	0.79	-1.0
1,284,205	-		Echvi_1120	0.80	-1.2
1,284,264	-		Echvi_1120	0.88	-2.0
1,284,290	-				-1.2
1,284,294	+				+1.0
1,284,294	+				-2.3
1,284,295	-				+0.3
1,284,295	-				-2.2
1,284,295	-				-1.3
1,284,313	+				-0.4
1,284,313	+				+0.8
1,284,314	-				-1.0
1,284,314	-				+0.5
1,284,314	-				+0.9
1,284,314	-				+0.0
1,284,314	-				-0.0
1,284,314	-				+1.0
1,284,314	-				+0.4
1,284,341	+				-1.1
1,284,341	+				+0.5
1,284,341	+				+1.0
1,284,345	-				-0.1
1,284,428	-		Echvi_1121	0.11	-0.4
1,284,428	-		Echvi_1121	0.11	-0.6
1,284,611	-		Echvi_1121	0.35	+0.4
1,284,611	-		Echvi_1121	0.35	+0.6
1,284,611	-		Echvi_1121	0.35	+0.4
1,284,611	-		Echvi_1121	0.35	-0.2
1,284,634	-		Echvi_1121	0.38	-0.0
1,284,656	-		Echvi_1121	0.41	-0.7
1,284,903	+		Echvi_1121	0.74	+0.0
1,284,903	+		Echvi_1121	0.74	-1.0
1,284,903	+		Echvi_1121	0.74	-0.6
1,284,905	+		Echvi_1121	0.74	-0.8
1,284,906	-		Echvi_1121	0.74	-1.0
1,284,906	-		Echvi_1121	0.74	+0.5
1,285,061	-				+0.0
1,285,061	-				-1.6
1,285,105	+				-0.6
1,285,113	-				-1.4
1,285,118	-				-0.7
1,285,120	+				-2.6
1,285,192	+				-0.5
1,285,193	-				-0.1
1,285,193	-				-0.3
1,285,193	-				-0.5
1,285,296	+				+0.3
1,285,365	+		Echvi_1122	0.16	-0.7
1,285,365	+		Echvi_1122	0.16	-1.3
1,285,365	+		Echvi_1122	0.16	+0.2
1,285,366	-		Echvi_1122	0.16	-0.2
1,285,487	+		Echvi_1122	0.35	-0.3
1,285,488	-		Echvi_1122	0.35	-0.6
1,285,509	-		Echvi_1122	0.39	-0.0
1,285,516	+		Echvi_1122	0.40	-0.0
1,285,517	-		Echvi_1122	0.40	-0.7
1,285,517	-		Echvi_1122	0.40	+1.6
1,285,517	-		Echvi_1122	0.40	+1.1
1,285,517	-		Echvi_1122	0.40	-2.2
1,285,517	-		Echvi_1122	0.40	-0.3
1,285,517	-		Echvi_1122	0.40	-3.0
1,285,517	-		Echvi_1122	0.40	-2.4
1,285,517	-		Echvi_1122	0.40	-1.6
1,285,517	-		Echvi_1122	0.40	+1.1
1,285,530	+		Echvi_1122	0.42	-0.0
1,285,559	+		Echvi_1122	0.47	-0.9
1,285,567	+		Echvi_1122	0.48	+1.1
1,285,567	+		Echvi_1122	0.48	-0.7
1,285,603	+		Echvi_1122	0.54	+0.2
1,285,603	+		Echvi_1122	0.54	-0.0
1,285,604	-		Echvi_1122	0.54	-1.2
1,285,605	+		Echvi_1122	0.54	-0.5
1,285,605	+		Echvi_1122	0.54	-0.2
1,285,681	+		Echvi_1122	0.66	+0.0
1,285,684	+		Echvi_1122	0.67	+0.3
1,285,684	+		Echvi_1122	0.67	+0.5
1,285,684	+		Echvi_1122	0.67	-1.2
1,285,685	-		Echvi_1122	0.67	-0.2
1,285,707	+		Echvi_1122	0.70	+1.6
1,285,708	-		Echvi_1122	0.70	-2.4
1,285,798	+		Echvi_1122	0.85	-0.5
1,285,798	+		Echvi_1122	0.85	-1.5
1,285,799	-		Echvi_1122	0.85	+0.5
1,285,799	-		Echvi_1122	0.85	+3.2
1,285,799	-		Echvi_1122	0.85	+0.3
1,285,806	-		Echvi_1122	0.86	-0.3
1,285,806	-		Echvi_1122	0.86	-0.9
1,285,806	-		Echvi_1122	0.86	-0.8
1,285,816	-		Echvi_1122	0.88	+0.8
1,285,848	+				+0.2
1,285,856	+				-0.3
1,285,857	-				-0.5
1,285,889	+				+0.6
1,285,890	-				-0.7
1,285,891	+				-0.3
1,285,892	-				-0.5
1,285,892	-				-0.2
1,285,922	+				+0.3
1,286,032	+		Echvi_1123	0.13	-0.9
1,286,088	-		Echvi_1123	0.19	-0.4
1,286,093	+		Echvi_1123	0.19	+0.6
1,286,094	-		Echvi_1123	0.19	+0.2
1,286,094	-		Echvi_1123	0.19	-0.2
1,286,094	-		Echvi_1123	0.19	+0.3
1,286,094	-		Echvi_1123	0.19	-0.0