Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1091

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,251,515	+				+1.3
1,251,515	+				+0.4
1,251,515	+				+1.8
1,251,515	+				+1.1
1,251,516	-				+0.1
1,251,516	-				-0.6
1,251,516	-				+0.6
1,251,516	-				+0.3
1,251,581	+		Echvi_1090	0.13	+6.1
1,251,582	-		Echvi_1090	0.14	-0.0
1,251,582	-		Echvi_1090	0.14	+0.0
1,251,629	+		Echvi_1090	0.23	+6.2
1,251,629	+		Echvi_1090	0.23	+6.3
1,251,630	-		Echvi_1090	0.23	-0.3
1,251,633	+		Echvi_1090	0.24	+6.1
1,251,633	+		Echvi_1090	0.24	+5.4
1,251,633	+		Echvi_1090	0.24	+5.6
1,251,634	-		Echvi_1090	0.24	-1.3
1,251,670	+		Echvi_1090	0.31	+5.1
1,251,670	+		Echvi_1090	0.31	+6.1
1,251,671	-		Echvi_1090	0.32	+1.6
1,251,692	-		Echvi_1090	0.36	-1.3
1,251,694	-		Echvi_1090	0.36	-1.1
1,251,694	-		Echvi_1090	0.36	+0.4
1,251,721	+		Echvi_1090	0.42	+6.6
1,251,722	-		Echvi_1090	0.42	+0.7
1,251,722	-		Echvi_1090	0.42	+0.0
1,251,806	+		Echvi_1090	0.59	+6.1
1,251,806	+		Echvi_1090	0.59	+6.3
1,251,807	-		Echvi_1090	0.59	-0.4
1,251,830	-		Echvi_1090	0.63	-1.3
1,251,831	+		Echvi_1090	0.64	+4.9
1,251,831	+		Echvi_1090	0.64	+5.8
1,251,831	+		Echvi_1090	0.64	+5.6
1,251,832	-		Echvi_1090	0.64	+0.6
1,251,988	+				+6.8
1,252,000	+				+1.9
1,252,001	-				+0.6
1,252,047	+				+6.2
1,252,068	+				+6.3
1,252,068	+				+5.7
1,252,069	-				-0.1
1,252,069	-				-0.5
1,252,073	+				+5.8
1,252,093	+				+6.6
1,252,148	+				+7.2
1,252,149	-				-0.5
1,252,156	+				+5.8
1,252,156	+				+6.8
1,252,157	-				+0.2
1,252,157	-				+0.5
1,252,212	+				+6.9
1,252,269	+				+7.0
1,252,283	-				-0.4
1,252,342	+				+7.3
1,252,344	+				+7.0
1,252,344	+				+6.6
1,252,344	+				+7.1
1,252,345	-				-0.6
1,252,345	-				+0.2
1,252,345	-				-0.4
1,252,345	-				+0.1
1,252,345	-				+1.0
1,252,345	-				+1.5
1,252,345	-				+0.1
1,252,345	-				+1.1
1,252,350	+				+6.4
1,252,350	+				+6.6
1,252,351	-				-1.3
1,252,353	-				-1.7
1,252,356	+				+6.6
1,252,356	+				+6.2
1,252,368	-				-0.3
1,252,371	+				+6.7
1,252,372	-				-0.2
1,252,382	+				+5.9
1,252,383	-				+0.1
1,252,383	-				-0.7
1,252,386	+				+5.8
1,252,387	-				-1.0
1,252,387	-				-1.0
1,252,403	+				+4.3
1,252,408	+				+3.9
1,252,408	+				+4.1
1,252,412	+				+4.7
1,252,413	-				-0.5
1,252,425	+				+5.0
1,252,512	+		Echvi_1091	0.16	+7.3
1,252,513	-		Echvi_1091	0.16	-1.5
1,252,552	+		Echvi_1091	0.22	+4.3
1,252,567	+		Echvi_1091	0.24	+6.1
1,252,568	-		Echvi_1091	0.24	-0.8
1,252,609	+		Echvi_1091	0.30	+6.3
1,252,792	+		Echvi_1091	0.55	+7.0
1,252,793	-		Echvi_1091	0.55	-0.1
1,252,909	+		Echvi_1091	0.72	+6.7
1,252,910	-		Echvi_1091	0.72	-1.1
1,252,910	-		Echvi_1091	0.72	+0.0
1,252,910	-		Echvi_1091	0.72	-2.8
1,252,910	-		Echvi_1091	0.72	+0.2
1,252,955	+		Echvi_1091	0.78	+6.8
1,252,958	+		Echvi_1091	0.78	+5.5
1,252,959	-		Echvi_1091	0.79	-0.0
1,252,959	-		Echvi_1091	0.79	-0.4
1,252,996	+		Echvi_1091	0.84	+7.0
1,252,996	+		Echvi_1091	0.84	+6.2
1,253,078	+				+5.4
1,253,078	+				+6.3
1,253,078	+				+5.5
1,253,142	-				-0.7
1,253,273	-		Echvi_1092	0.25	-0.4
1,253,273	-		Echvi_1092	0.25	-0.7
1,253,287	+		Echvi_1092	0.28	-0.4
1,253,287	+		Echvi_1092	0.28	-0.7
1,253,288	-		Echvi_1092	0.28	-0.9
1,253,294	-		Echvi_1092	0.29	-2.1
1,253,347	+		Echvi_1092	0.38	+1.3
1,253,348	-		Echvi_1092	0.38	-0.8
1,253,348	-		Echvi_1092	0.38	-2.5
1,253,423	+		Echvi_1092	0.52	+0.2
1,253,423	+		Echvi_1092	0.52	-0.1
1,253,423	+		Echvi_1092	0.52	-0.6
1,253,424	-		Echvi_1092	0.52	-0.7
1,253,424	-		Echvi_1092	0.52	-2.4
1,253,465	-		Echvi_1092	0.59	-3.0
1,253,585	-		Echvi_1092	0.80	-2.4
1,253,675	-				-2.3
1,253,679	-				-2.5
1,253,679	-				-0.5
1,253,684	-				-1.0
1,253,686	+				-0.7
1,253,686	+				-0.4
1,253,686	+				-1.4
1,253,686	+				-3.3
1,253,686	+				-0.1
1,253,705	-				-1.6
1,253,898	+		Echvi_1093	0.34	-1.6
1,253,898	+		Echvi_1093	0.34	-0.9
1,253,899	-		Echvi_1093	0.34	-1.2
1,253,901	+		Echvi_1093	0.34	+0.2
1,253,901	+		Echvi_1093	0.34	+1.1
1,253,923	-		Echvi_1093	0.38	-0.7
1,253,981	-		Echvi_1093	0.48	+0.9
1,254,025	+		Echvi_1093	0.55	-1.8
1,254,075	-		Echvi_1093	0.64	-3.1