Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1080

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,241,575	+		Echvi_1078	0.59	+1.3
1,241,612	+		Echvi_1078	0.64	-2.3
1,241,682	-		Echvi_1078	0.75	+0.6
1,241,696	-		Echvi_1078	0.77	-0.3
1,241,727	+		Echvi_1078	0.81	+0.0
1,241,903	+				+0.4
1,241,903	+				-0.3
1,241,903	+				-0.3
1,241,904	-				+0.5
1,241,904	-				+3.9
1,241,939	+				+0.4
1,242,136	+				+1.3
1,242,137	-				+0.1
1,242,143	+				-0.4
1,242,143	+				+0.5
1,242,144	-				+2.1
1,242,174	-				-0.6
1,242,184	+				+0.5
1,242,185	-				+0.0
1,242,215	+				-0.4
1,242,216	-				+0.4
1,242,216	-				-0.7
1,242,247	+				+0.5
1,242,264	-				-0.8
1,242,267	-				+0.1
1,242,283	+				+0.7
1,242,336	+				-0.8
1,242,363	-				-0.3
1,242,491	-				+0.2
1,242,509	+				-1.8
1,242,510	-				-0.0
1,242,513	-				+1.0
1,242,513	-				+2.2
1,242,513	-				-0.0
1,242,515	-				-1.2
1,242,595	+		Echvi_1080	0.25	-1.7
1,242,596	-		Echvi_1080	0.26	+1.8
1,242,610	+		Echvi_1080	0.30	+0.9
1,242,619	+		Echvi_1080	0.32	+1.0
1,242,619	+		Echvi_1080	0.32	+0.8
1,242,619	+		Echvi_1080	0.32	-0.4
1,242,656	+		Echvi_1080	0.44	+0.0
1,242,736	+		Echvi_1080	0.68	+0.1
1,242,818	-				-0.4
1,242,818	-				-0.3
1,242,858	-				+0.4
1,242,915	+		Echvi_1081	0.10	-1.6
1,243,021	+		Echvi_1081	0.30	+2.1
1,243,022	-		Echvi_1081	0.30	+1.6
1,243,022	-		Echvi_1081	0.30	-0.8
1,243,115	+		Echvi_1081	0.47	+0.0
1,243,116	-		Echvi_1081	0.47	+0.3
1,243,124	+		Echvi_1081	0.48	-0.4
1,243,125	-		Echvi_1081	0.48	-1.6
1,243,156	+		Echvi_1081	0.54	-0.8
1,243,212	+		Echvi_1081	0.64	-0.7
1,243,213	-		Echvi_1081	0.64	-2.5
1,243,213	-		Echvi_1081	0.64	-0.6
1,243,213	-		Echvi_1081	0.64	-0.4
1,243,223	+		Echvi_1081	0.66	-1.4
1,243,321	+		Echvi_1081	0.84	-1.4
1,243,321	+		Echvi_1081	0.84	-1.6
1,243,343	-		Echvi_1081	0.88	+0.6
1,243,343	-		Echvi_1081	0.88	+0.0
1,243,343	-		Echvi_1081	0.88	+0.8
1,243,363	+				-0.1
1,243,399	+				-0.7
1,243,572	+		Echvi_1082	0.24	-0.2
1,243,585	+		Echvi_1082	0.25	+0.1
1,243,585	+		Echvi_1082	0.25	-0.2
1,243,585	+		Echvi_1082	0.25	-0.5
1,243,585	+		Echvi_1082	0.25	-0.1
1,243,585	+		Echvi_1082	0.25	-0.6
1,243,586	-		Echvi_1082	0.25	-0.3
1,243,586	-		Echvi_1082	0.25	-0.2
1,243,661	+		Echvi_1082	0.34	+0.2
1,243,662	-		Echvi_1082	0.35	+0.1
1,243,662	-		Echvi_1082	0.35	-0.3
1,243,684	+		Echvi_1082	0.37	-0.4
1,243,684	+		Echvi_1082	0.37	+0.4
1,243,685	-		Echvi_1082	0.37	+1.6
1,243,685	-		Echvi_1082	0.37	-1.6
1,243,700	+		Echvi_1082	0.39	-0.0
1,243,729	+		Echvi_1082	0.43	-0.2
1,243,729	+		Echvi_1082	0.43	+0.3
1,243,774	-		Echvi_1082	0.48	+0.2
1,243,802	+		Echvi_1082	0.52	-1.2
1,243,802	+		Echvi_1082	0.52	-0.8
1,243,802	+		Echvi_1082	0.52	-0.1
1,243,803	-		Echvi_1082	0.52	-2.3
1,243,804	+		Echvi_1082	0.52	+0.0
1,243,804	+		Echvi_1082	0.52	-1.3
1,243,804	+		Echvi_1082	0.52	-0.7
1,243,804	+		Echvi_1082	0.52	+0.2
1,243,805	-		Echvi_1082	0.52	-0.4
1,243,805	-		Echvi_1082	0.52	+0.0