Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1032

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,193,184	+		Echvi_1031	0.42	-0.9
1,193,185	-		Echvi_1031	0.42	-2.5
1,193,204	-		Echvi_1031	0.43	-1.7
1,193,242	-		Echvi_1031	0.46	-2.5
1,193,287	+		Echvi_1031	0.49	-3.1
1,193,287	+		Echvi_1031	0.49	-1.2
1,193,288	-		Echvi_1031	0.49	-1.5
1,193,288	-		Echvi_1031	0.49	-0.7
1,193,288	-		Echvi_1031	0.49	-0.4
1,193,288	-		Echvi_1031	0.49	-2.7
1,193,288	-		Echvi_1031	0.49	-0.7
1,193,288	-		Echvi_1031	0.49	-3.9
1,193,288	-		Echvi_1031	0.49	+1.6
1,193,297	+		Echvi_1031	0.50	-1.0
1,193,312	+		Echvi_1031	0.51	-2.2
1,193,313	-		Echvi_1031	0.51	-1.4
1,193,332	+		Echvi_1031	0.53	-1.7
1,193,332	+		Echvi_1031	0.53	-3.0
1,193,332	+		Echvi_1031	0.53	-2.1
1,193,332	+		Echvi_1031	0.53	-2.6
1,193,392	+		Echvi_1031	0.57	-2.5
1,193,393	-		Echvi_1031	0.57	-1.5
1,193,393	-		Echvi_1031	0.57	-3.0
1,193,495	+		Echvi_1031	0.64	-2.0
1,193,496	-		Echvi_1031	0.65	-0.1
1,193,496	-		Echvi_1031	0.65	-1.8
1,193,496	-		Echvi_1031	0.65	+0.2
1,193,613	+		Echvi_1031	0.73	-1.4
1,193,613	+		Echvi_1031	0.73	-2.5
1,193,614	-		Echvi_1031	0.73	-2.6
1,193,614	-		Echvi_1031	0.73	-1.8
1,193,614	-		Echvi_1031	0.73	-2.9
1,193,614	-		Echvi_1031	0.73	-2.0
1,193,633	+		Echvi_1031	0.75	-1.7
1,193,779	-		Echvi_1031	0.85	-2.0
1,193,779	-		Echvi_1031	0.85	-1.3
1,193,810	-		Echvi_1031	0.87	-2.5
1,193,890	+				-3.1
1,193,891	-				-2.7
1,193,891	-				-1.4
1,193,961	+				-1.5
1,193,962	-				-1.7
1,193,978	-				-2.4
1,193,994	+				-0.5
1,193,994	+				+1.0
1,193,995	-				+0.6
1,194,004	+				-1.3
1,194,004	+				-0.6
1,194,004	+				-0.5
1,194,004	+				+0.6
1,194,004	+				-2.8
1,194,004	+				-1.3
1,194,005	-				+0.4
1,194,005	-				-2.6
1,194,005	-				-0.3
1,194,005	-				+0.1
1,194,005	-				+0.6
1,194,005	-				+0.0
1,194,018	+				-1.2
1,194,018	+				+0.6
1,194,018	+				-0.2
1,194,049	+				-0.2
1,194,049	+				-0.0
1,194,049	+				-0.1
1,194,050	-				-0.7
1,194,050	-				-0.7
1,194,050	-				-0.0
1,194,056	-				+0.5
1,194,064	+				+1.1
1,194,085	+				-0.7
1,194,118	-				+0.9
1,194,118	-				+0.5
1,194,164	+				-1.0
1,194,164	+				+2.8
1,194,164	+				-0.1
1,194,478	-		Echvi_1032	0.12	-0.4
1,194,555	-		Echvi_1032	0.15	-1.0
1,194,945	+		Echvi_1032	0.29	-1.0
1,195,003	-		Echvi_1032	0.31	-0.2
1,195,014	-		Echvi_1032	0.31	+0.0
1,195,102	-		Echvi_1032	0.35	-1.2
1,195,344	+		Echvi_1032	0.43	-3.0
1,195,512	-		Echvi_1032	0.49	-1.0
1,195,598	-		Echvi_1032	0.52	+1.2
1,195,603	-		Echvi_1032	0.52	-0.7
1,195,870	-		Echvi_1032	0.62	+0.0
1,195,910	-		Echvi_1032	0.63	-1.2
1,195,964	-		Echvi_1032	0.65	-0.5
1,196,951	-				-0.2
1,196,960	-				-0.1
1,196,960	-				+0.6
1,196,960	-				+0.1
1,196,960	-				+0.6
1,196,966	+				-0.7
1,196,967	-				+0.1
1,196,969	-				+2.0
1,196,969	-				-0.1
1,197,024	+				-0.1
1,197,056	+				-0.8
1,197,066	+				-1.4
1,197,066	+				+0.6
1,197,067	-				-0.2
1,197,160	+				-1.4
1,197,160	+				-0.7
1,197,161	-				+0.6
1,197,178	+				+0.9
1,197,178	+				+0.1
1,197,179	-				-0.6
1,197,213	+				+0.8
1,197,213	+				-0.1
1,197,264	-				-2.1
1,197,264	-				+1.9
1,197,264	-				+2.4
1,197,264	-				-1.9
1,197,269	-				-0.9
1,197,289	+				-1.4
1,197,298	-				-0.2
1,197,298	-				-1.5
1,197,356	+				-0.6
1,197,357	-				-0.3
1,197,363	-				-2.3
1,197,363	-				-0.6
1,197,391	+				-1.5
1,197,495	+		Echvi_1033	0.32	-0.3
1,197,495	+		Echvi_1033	0.32	-0.4
1,197,496	-		Echvi_1033	0.33	-0.9
1,197,541	-		Echvi_1033	0.47	+0.5
1,197,654	-		Echvi_1033	0.82	-1.5
1,197,711	-				-0.4
1,197,711	-				-0.2
1,197,750	-				-0.4
1,197,780	-				+2.0
1,197,808	-				-0.4
1,197,813	+				-0.7
1,197,847	+				+0.9
1,197,847	+				-0.5
1,197,864	+				-0.4
1,197,884	+				-2.6
1,197,884	+				+0.0
1,197,884	+				-1.5
1,197,885	-				+0.9
1,197,944	-				+0.7
1,197,944	-				+1.4